Megasphaera massiliensis: LCQ47_11360
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Entry
LCQ47_11360 CDS
T07781
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
mmax
Megasphaera massiliensis
Pathway
mmax03030
DNA replication
mmax03430
Mismatch repair
mmax03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LCQ47_11360
03430 Mismatch repair
LCQ47_11360
03440 Homologous recombination
LCQ47_11360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmax03032
]
LCQ47_11360
03400 DNA repair and recombination proteins [BR:
mmax03400
]
LCQ47_11360
Enzymes [BR:
mmax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LCQ47_11360
DNA replication proteins [BR:
mmax03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LCQ47_11360
DNA repair and recombination proteins [BR:
mmax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LCQ47_11360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
YhfH
SSB
HHH_3
T2SSK
Motif
Other DBs
NCBI-ProteinID:
UBS53454
LinkDB
All DBs
Position
2423784..2427422
Genome browser
AA seq
1212 aa
AA seq
DB search
MKVWHIVPKNDILIPVDGGQTVAVASIAADLESHWWKVKTESAYAPGDMDLLRDRVCRKL
GLDGNVSVEHQVTSVFHGGDMPLSIPENDPLRQIADISTDDLEGYGIPHEDSYESLYDVD
EELYQDEDYKKACQCASVSSCSVSKGEKGNGGTKTGGDSRVWMGRAFGGQPVPINDVLGE
EQNDVVLQGKVVKVEFRELKSKRILLTFQMADSTNGISAKKFLDVSNQGGSGKFRRKNTL
TPEEYDCLKTKLQPGAYVRIHGNIQYDNYQNDYVFMAYDMMEADGGTVEREDHNPTPRVE
LHLHTVMSDMDALITVKQLIKTVKKWHHPAIAVTDHGVVQSFPLLQEISTDKSNGVKVIY
GMEGYLFDDKIDQSYHIIILAKNQTGIRNLYKLVSISHLKYIYRGRPRIPRAVLDEYREG
LVLGSACEAGELVRSMVQKRLPYEELKKIADYYDYLEIQPLTNNGFLVREGYVADEEGLR
DINRTILKIGDELGKLTVATCDAHFMNPEDKIYREILMTGKGFKDAEFQPDLYLRTTDEM
LEEFSYLGEDRAREVVITNPNKINDMIDDCRPIPKETLYFPQIAGSSEALKHMCYEKAHE
IYGTPLPKIVEDRLEEEFTSILGHGFGVLYYIAHKLVKHSNDDGYLVGSRGSVGSSFVAT
MSGITEVNPLPPHYVCPKCHWSHFYTKGEYGGGFDLPDKTCPECGEQLLKNGHNIPFAIF
LGFDGDKVPDIDLNFSGEYHPKAHKYTEELFGKDNVFRAGTIGAVKDKTAYGYVMKWAEK
KGIHVNEAYINSLVSGCTGIKNTTGQHPGGVMVIPRDMDVHHFTPVQYPANKKESGIITT
HFDYHSIEGRLVKLDILGHDDPTVIRMLEDMTHIKATTIPFDDPATMSLFSSTKALGVTP
EELGSKVGSLGIPEFGTNFVRQMLVDTKPKTFSELVRISGFSHGTDVWLNNAQDLITSGT
VPLKEAVSTRDDIMNYLIEHGIKPKTSFKVMENVRKGKGIDKPNKLGQKTTDYEGELKEG
HIPQWFIESCQKIGYLFPRAHAVAYVMMAFRIAWYKINQPLAYYCAYFTIRAKAFKLSAM
IHGLEGQERAMKEIAAKGKSASKIEQDLYSALELAKEMSLRGFSFLNVDINRSAATKFTI
CDGKILPPFTAIDGLGESVAEQIVAERAIAPFSSKADLKMRGKVSQSLIDTMSADGCLGD
LPEDEQIDLFAM
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtttggcatattgttcctaaaaatgatatattgattcccgtcgacggcggtcag
accgtcgccgtcgcctccattgcagctgacctggaaagccattggtggaaggtcaagacc
gagtcggcctatgcgccgggcgatatggacctcctccgcgaccgggtctgccggaagctg
ggccttgacggcaacgtgtccgtcgaacaccaggtgacgtctgtcttccacggcggcgac
atgcccctttccatcccggaaaacgatcccctgcggcagattgccgacatctcgacggat
gacctcgaaggctacggcattccgcacgaagattcgtacgaatccctctacgacgtcgac
gaagaattatatcaggatgaagactataaaaaagcctgccagtgcgcttccgtctcgtcg
tgcagcgtcagcaagggcgagaaggggaatggcggcaccaagaccggcggcgacagccgg
gtctggatgggccgggcttttggcggccagcctgttcccatcaacgacgtcctcggcgaa
gagcagaacgacgtcgtccttcagggcaaggtcgtcaaagtcgagttccgggaattgaag
tccaagcgcatcctcttgaccttccagatggccgacagcaccaacggcatttcggccaaa
aagttcctcgacgtcagcaaccagggcggcagcggcaaattccgccgcaagaataccctg
acgccggaagaatacgactgcctcaagacaaaactgcagcccggcgcctacgtccgcatc
cacggcaatatccaatacgacaactaccagaacgactacgtcttcatggcctatgacatg
atggaagccgacggcgggactgtcgaacgggaagaccataacccgacgcctcgtgtcgaa
ctccatctccatacggtcatgagcgatatggacgctttgattacggtcaaacagctcatc
aagaccgtcaaaaaatggcatcatccggccattgccgtcaccgaccacggcgtcgtccag
tccttcccgctccttcaggaaatctcgacggataagagcaacggcgtcaaggtcatctac
ggcatggaaggctacctcttcgatgacaagatcgaccagtcgtaccatatcatcatcctg
gccaagaaccagacgggcatccgcaacctgtacaaactggtcagcatctctcacctgaaa
tatatctaccgcggccgtccccgcattccccgggccgtcctcgacgaataccgcgaaggc
ctcgtcctgggctcggcctgtgaagcaggcgaactggtccgctccatggtccagaagcgc
cttccttacgaagaattaaagaaaatcgccgattactacgattacctggaaatccagccc
ctgaccaacaacggcttcttagtccgcgaaggctatgtggccgacgaagaagggctgcgc
gacatcaatcggacgatcttgaaaatcggtgatgaactgggaaaactgaccgtcgccacc
tgcgatgcccacttcatgaatcccgaagacaagatctaccgggaaatcctcatgaccggc
aagggcttcaaagatgccgaattccagcccgacctctacctgcgcacgacggacgaaatg
ctggaagaattttcctacctcggcgaagaccgggccagggaagtggtcattaccaacccc
aataagatcaacgacatgatcgacgactgccggccgatcccgaaggaaacgctgtacttc
ccgcagatcgcaggctcgtcggaagccttgaaacacatgtgttacgaaaaggcgcatgaa
atctacggcacgcccttgccgaagatcgtcgaagaccggctcgaagaagaatttacgtcc
atcctcggccacggcttcggcgtcctttattacatcgcccataaactggtaaaacactcc
aacgacgacggctacctcgtaggttcccgaggctctgtcggctcgtctttcgtagccacc
atgtcaggcattacggaagttaatcccctgcctccgcactacgtctgccccaagtgccat
tggagccacttctatacgaaaggggaatacggcggcggcttcgacctgcccgataagacc
tgccccgaatgcggcgagcagctcttaaagaacggccacaacatcccctttgccatcttc
ctcggtttcgacggcgacaaggtccccgatatcgacctcaacttctccggcgaataccat
cccaaggctcataaatatacggaagaactcttcgggaaggacaacgtcttccgcgccggt
accatcggtgccgtcaaggataagacggcctacggctacgtcatgaaatgggccgagaag
aagggcatccacgtcaacgaagcctacatcaacagcctcgtgtcaggctgcacgggcatc
aagaatacgacgggccagcatccgggcggcgtcatggttatcccccgcgatatggacgtc
catcactttacccccgtccagtacccggccaataagaaagaaagcggcatcattacgact
cacttcgattaccattccatcgaaggccgtctggtcaagctcgacatcctcggccacgat
gatccgacggtcatccgcatgttagaggacatgacccatatcaaggccacgaccattccc
ttcgacgacccggccacgatgagcctcttcagctcgaccaaggccctcggcgtaacgccg
gaagaactgggttccaaagtcggcagcctggggatcccggaattcgggaccaacttcgtc
cgccagatgctggtcgataccaagcccaagaccttctcggaactggtccgtatttccggt
ttctcccacggtaccgacgtctggctgaacaacgcccaggacctcatcacgtccggcacg
gtccccctgaaagaagccgtctcgacccgtgacgacatcatgaactatctcatcgaacac
ggcatcaaacccaagaccagtttcaaggtcatggaaaacgtccgtaagggcaagggcatc
gataagcccaacaaactgggccaaaagacgacagactacgaaggcgaactaaaagaaggg
cacattcctcagtggttcatcgaatcgtgccagaaaatcggctacctcttcccgagggcc
cacgccgtggcctacgtcatgatggccttccgcatcgcctggtataagatcaaccagccc
ctggcttactactgcgcttacttcaccatccgggccaaggccttcaaactgtcggccatg
atccacggcctcgaagggcaggaacgggccatgaaggaaatcgccgccaagggtaagagt
gcttccaagatcgaacaggacctctattcggccttggaattggccaaggaaatgagcctt
cgcggcttctccttcctgaacgtcgacatcaatcgctcggcagcgacgaaattcaccatc
tgcgacggcaagatcctgccgccctttacggccatcgacggcctgggcgaaagcgtggcc
gaacagatcgtggccgaacgggccatcgctcccttcagttccaaagccgacctcaagatg
cgcggcaaggtctcccagtccctcatcgacaccatgagtgccgacggctgcttaggcgac
cttccggaagacgaacagatcgacctctttgccatgtaa
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