Malurus melanocephalus (red-backed fairy wren): 130580421
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Entry
130580421 CDS
T09178
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmea03016
]
130580421 (CDKAL1)
Enzymes [BR:
mmea01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
130580421 (CDKAL1)
Transfer RNA biogenesis [BR:
mmea03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
130580421 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-GeneID:
130580421
NCBI-ProteinID:
XP_057233887
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MPAACEPVLEDIEDIVSAEDLKPHDRQFVRKNVIPKVRKRNSHKNVQTDDEPPSDSIIPG
VQKIWIRTWGCSHNNSDGEYMAGQLAAYGYTITDNSAEADLWLLNSCTVKNPAEDHFRNS
IKKAQEGKKKVVLAGCVPQAQPRQEYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQK
KDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPVEELVDRA
KQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGAMLRLGMTNPPYILEHL
EEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFKQVVDFLKEKVPGITIATDI
ICGFPGETDEDFQETMKLVELYRFPSLFINQFYPRPGTPAAKMPQVPAAVKKQRTKDLSQ
LFHSYNPYDHKVGERQRVLVTEESFDSNYYVAHNPFYEQILVPKDPLLMGKMVEVNIYEA
GKHFMKGQPVSDARVHTASITRPLAKGEVSGLTEEFRRAXQNGTNWKAQPSAEIPVKTRL
GSWMALQFPWQQEGGGLKILSVSLALLAVLVMFYYGGMKTEL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgcatgtgagccagtgcttgaggacatcgaagacattgtgtcagcagaagat
ttgaagccacatgatcggcagtttgtgagaaagaatgttattcccaaagtgcgaaaacgc
aactcccacaaaaatgttcagacagatgatgagcccccaagtgacagcattattcctggt
gttcagaaaatctggattcgtacatggggatgttctcacaataattcagatggtgaatac
atggctggacagctggctgcrtatggatacacaattacagacaactctgctgaagcagat
ttatggttgctgaacagttgtacagtaaaaaatcctgccgaggaccacttcagaaactcc
atcaagaaagcccaagaagggaagaagaaagttgttctagcaggctgtgtaccacaggcc
caacctcgccaggagtacctgaaaggcttgagtattataggggttcagcagatagatcgt
gtagtagaagttgtggaggaaactattaaaggtcattctgtgagactgctgggtcagaaa
aargataatggaaaacgtttggggggagctcgactggatttgccaaagattaggaagaat
ccactgatagaaataatttccatcaatacagggtgtctcaatgcatgtacctactgtaaa
accaagcatgccagaggagatctagcaagttayccagttgaagaactggtggacagagcc
aaacagtcttttcaagagggtgtttgtgagatatggctgaccagtgaagacacaggggct
tatggcagagacattggcacagacctccccacgcttctgtggaagctggttgaagttatt
cctgagggagctatgctgaggcttggcatgacaaaccctccctatattttagagcatctg
gaggaaatggccaagattcttaatcatccaagagtatatgcttttctgcacataccagtc
cagtcagcttctgacagcgtgctcatggacatgaaaagagaatactgtgtggcagacttc
aaacaagtagtggatttccttaaagaaaaagtgcctggaataacaattgctacagacata
atttgtggttttcctggagagacagatgaagattttcaagaaacaatgaaacttgtagaa
ctgtacaggtttccaagcttgtttattaatcaattctacccacgcccaggaaccccagcg
gcaaaaatgcctcaagttccagctgcagtgaaaaaacagagaacgaaggatctgtcccag
ctgtttcattcatacaatccatatgatcataaggttggagagaggcagagagttctggta
acagaagaatcctttgactccaattactacgttgctcacaatcctttctatgagcagatt
cttgtgccaaaagatcctctgttaatgggtaagatggtcgaagtgaatatttatgaagct
gggaaacattttatgaaggggcagccagtgtcagatgccagagttcacactgcatccatc
accagaccgttagcaaaaggagaagtttctggtttaacagaggagttcagacgtgcayca
cagaatggcacaaactggaaagcacagccttctgctgagatcccagtgaaaacacggctg
ggctcgtggatggctttgcagttcccatggcaacaggaaggaggtggactgaagatcctg
tctgtcagcctggctctactggcagttcttgttatgttttactacggaggaatgaaaaca
gaactgtga
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