Malurus melanocephalus (red-backed fairy wren): 130581166
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Entry
130581166 CDS
T09178
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1-like
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
130581166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmea03021
]
130581166
Enzymes [BR:
mmea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
130581166
Transcription machinery [BR:
mmea03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
130581166
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
HMG_box
BUD22
Motif
Other DBs
NCBI-GeneID:
130581166
NCBI-ProteinID:
XP_057235105
LinkDB
All DBs
Position
Unknown
AA seq
1613 aa
AA seq
DB search
KLYLLIRGSCLNCHMLTCPRAVVHLLLSQLKVLEKGLLHAVHDLEIILNKFLEQCADATG
SEIEEELDRHVQEMLQSSQLRDRCSNVKNVCECRNKLITQFWKAHMASKKCPNCKSRRSL
VRKEHNSKLTVTYPSTVYNKSGEKGILDELGGIDESQLGKRGYLTPMTAKEYILALWKNE
GFFLRYLFPGMDPHENSGFSPDLFFLDLLVVPPSRYRPVNRIGDRLFTNGQTVNLQAVMK
DAQLIRKLLVFMAKEQCQPIKIGEEIQTDTGGDSEPLDRSVLTTIPGQSIADKLYNAWIR
LQSHVNIVFDSDMDKLITEKYPGIRQLLEKKEGLFRKHMMGKRVDFAARSVICPDMYIGT
NEIGIPMVFATKLTYPQPVTPWNVKELRQAVINGPKVHPGASMVIKEDGSRTVLSATSLT
QREAIAKQLLTPTSGAPETGLKIVCRHIKNGDVLLLNRQPTLHRPSIQAHRARILPGEKV
LRLHYANCKAYNADFDGDEMNAHFPQSELGRAEAYTLACTDEQYLVPKDGKPLPGLIQDH
MVSGVSMTIRGCFFTREQYMELVYRGLTDKIGRIKIFPPAIMKPQRLWTGKQVVSTLLIN
IIPESHARLNLTGKAKIGGRAWVKGPAKGCLNLDSMCESQVIIRDGELLCGVLDKAHFGS
SAYGLVHCCYEIYGGETSGKVLTCLGRLFTAYLQLYRGFTMGIEDILVKPEADHKRKKII
ERSRQSGIEAVRAALNLPETASCEEVQGKWQDAHLCKDQRDFNMVDMKFKEEVNNYNNEV
NKVCMPLGLHRSFPENNLQLMVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLP
CFQPYDFSPSSGGFVTGRFLTGIRPSEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHL
EGLVVQYDLTVRDSDGSVVQFLYGEDGLDIPKTQFLQPEQFPFIAENYEVIQKTNHLDEA
LARMESHQANQQFKAIKKWRARHQNSVQREGGFLLFSQKKLASVKAQLPGGEIKSGRDPA
TLQLLKMWYELDEKKRRKYLKKTNKCPDPSLGVWRPDTYFASVSETFESGVEGYINKWQS
ESSQSYTHPALSSDRLKDLLYLKWQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGR
GEMNVTLGIPRLREILMVASSNIKTPMMSVPVFNTKKALKKVKQLKKQLTRVCLAEVLQK
VDIEESLHVKHKLNKHRLYKIKFHFLPHEYYREEKCVKPRQILHFMETRFFKVFLEAIKR
KTAKMASFNEVSTRKTTRKDLDDDQDKTQNNQEAVEEEENIVDAEADEGDGDATETKRRK
NQEEEVDYESEEENGEENTNENQEDEEAESEKEEGTPGAEEDQNPAEGEDSQHLSFVSKT
KKVKDQLLQSAEVRVSAVVESHPSIQDYMFDTENELWCEVSVALPLTKVYFDLSSLLASL
ARSTVIHEVKGITRCLLNESTNKEGQKEFVLHTEGINLAELFRYSDILDLNRLYCNDIHA
MAKNYGIESALRVIIKEIKDVFAVYGIVVDPRHLSLVADYMCFEGIYKPLNRFGIQSNSS
PLQQMTFETSYKFLKEATMMGAHDELRSPSACLVVGKVVKGGTGLFDLKQPLT
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
aaattataccttctcatccgtggttcttgtttgaattgtcacatgctgacatgtcctcga
gctgtggttcacctgctgctaagtcagctgaaggtgctggagaaggggttgcttcatgct
gtccatgaccttgaaatcattctgaacaagtttttagaacaatgtgcagatgcaacaggt
tcagaaattgaagaagagttagatcgccatgttcaggaaatgttacaaagctctcagctg
agagatcgatgttcaaatgtcaaaaatgtgtgtgagtgtagaaataaactgataacacag
ttctggaaagcacacatggcttcaaagaaatgcccaaattgcaaatccaggagatcactg
gtacgaaaggagcacaacagcaaactgacagtaacttatccttctacagtgtacaataag
tcaggagagaaaggcattctggatgaattaggaggtattgatgaaagccaattagggaag
agaggatacctgacaccgatgactgctaaggaatacatcctggctctgtggaagaatgaa
ggtttctttttgcgttatctcttccctgggatggatccccatgagaattcaggattcagt
ccagacttgttttttttagatctacttgtggttccaccatcgaggtatcgtcccgtaaat
cgtattggagatcgcctgttcacaaatgggcagactgtgaacttgcaggctgtgatgaaa
gatgcccaactgatacggaagctcttggttttcatggccaaagaacagtgtcagccaata
aaaattggagaagaaattcaaacagacacaggaggggatagtgaacctctggaccgttct
gtgttgaccaccattccaggacagagcattgcagataagctgtacaacgcttggatacgt
ctccagagccatgtcaacattgtgtttgacagtgacatggacaagctgataacagaaaaa
taccctggtattcgtcagctgttggagaagaaggaaggactgttccgcaagcacatgatg
gggaagcgcgtggattttgctgctcggtccgtcatttgccccgatatgtacattgggacc
aacgagattggcatccctatggtatttgctaccaaactgacttaccctcagccagtcact
ccctggaatgtcaaagagctgaggcaggctgtcatcaatggccccaaggtccaccctggt
gcctccatggtcattaaggaggacgggtcgcgcacggtgctgagcgccaccagcctgacc
cagcgcgaggccatcgccaagcagctcctcacccccacctcaggggcacccgagacaggg
ctgaagattgtgtgtcggcacatcaagaatggagatgtgctgttactgaaccgccagccc
acgcttcacagaccctccatccaagctcaccgggccagaatcctgcctggggagaaagtg
ctgaggcttcactatgccaactgcaaggcttacaatgctgactttgatggggatgaaatg
aatgcccattttccacagagcgagctgggcagagctgaagcctacaccttagcctgcact
gatgagcagtacctggtgccaaaggatgggaagccacttcctggcttgatccaggatcac
atggtttctggagtcagcatgacaatacggggctgctttttcaccagagagcaatacatg
gagctggtgtaccgaggactgacagacaaaataggaagaattaaaatctttcctcctgcc
attatgaagccacagcgattatggacgggaaagcaggttgtttctacgttgttaataaac
atcattccagaaagccacgctcgactaaatttgactgggaaagcaaagattggtgggaga
gcctgggtaaaggggcctgcaaaaggatgtctaaatcttgattcaatgtgtgaatctcag
gtcattatcagagatggggaattactgtgtggagtcttggacaaagctcactttggcagc
tctgcctatggcctggtgcactgctgctatgagatctatgggggtgagaccagtggcaaa
gtgctgacgtgcctggggcgcctcttcactgcttacctgcagctctacaggggctttacc
atggggattgaagatattttggttaaacccgaagcagaccacaaaagaaaaaaaatcatt
gaaaggtcaaggcagagtggtattgaagctgttagagctgctcttaatttgccagaaaca
gcatcatgtgaggaggtccaagggaagtggcaggatgcccatctctgcaaagaccagagg
gattttaacatggttgatatgaaattcaaggaggaagtaaacaattacaacaaygaagtt
aacaaggtttgcatgccccttggtcttcacaggagctttccagagaacaatttgcagttg
atggtacagtcaggagccaaaggatccactgtaaacacaatgcagatttcttgtttgctg
ggccagattgagttggaaggtcgaagacccccactgatggcttctggcaaatcactgccg
tgtttccagccttatgatttttcccctagctcaggaggatttgtgactggcagatttctc
actgggatcagaccatctgagttcttctttcactgcatggctggcagggaaggtcttgtg
gatacagctgtcaaaaccagccgttctgggtacctgcaaaggtgtatcataaagcatttg
gaagggctggtagttcagtatgacctgactgtacgagacagtgatggcagcgtggtgcag
tttctgtatggagaagatgggcttgatatccctaaaactcagtttttacaacctgagcag
tttcctttcattgcagaaaactatgaggtaatccagaagacaaatcatctggatgaagct
ttagcgaggatggaatctcaccaagctaaccagcagttcaaagctatcaaaaagtggcga
gccagacaccaaaattctgtgcaaagagaaggaggctttctgctgttttcccaaaagaaa
ctggcaagtgtgaaagctcagcttccaggaggtgaaataaagagtggaagagatcctgct
actttacagttgttgaagatgtggtatgagctcgatgagaagaaacgaaggaagtacctg
aagaagacaaataaatgtcctgacccaagcctgggggtttggcgtccagatacttatttt
gcatctgtttcagaaacatttgagagtggagttgaaggttatatcaataaatggcaatct
gagagcagccagagttacacacacccagcactttcttctgacagattaaaggatctgttg
tatttaaagtggcagcgatctctttgtgacccaggagaagctgtggggcttcttgcagct
cagagtattggggarccttcgacacagatgactctgaacacctttcactttgctggcaga
ggtgaaatgaatgtcacattgggtattccaaggttgcgggaaatactgatggtggccagc
tcaaacattaaaacaccaatgatgagtgttcctgtgttcaataccaagaaagctcttaaa
aaggtgaaacagctgaagaaacagctcacaagagtgtgcttagctgaggtcttgcagaaa
gtagacattgaggaatccctgcatgtgaagcacaagctgaacaagcatcgcctctacaaa
atcaaatttcatttcttgccccatgaatattaccgagaggagaaatgtgtgaagcccagg
cagatcttgcacttcatggagacaaggttctttaaagtttttctggaagcaattaagagg
aagactgcaaagatggcatcttttaatgaagtcagcactcggaagacaactcggaaggat
ttagatgacgaccaagacaagacacaaaataatcaggaagctgtagaggaagaagagaac
attgttgatgcagaagctgatgaaggggatggtgatgctacagaaaccaaacggaggaag
aaccaggaagaagaggttgattatgagagcgaagaagagaacggagaagaaaayactaat
gagaatcaggaagatgaagaggctgaatctgaaaaagaagaagggactcctggtgctgaa
gaggatcagaacccagcagagggtgaagactcccaacatctttcctttgtgtctaagact
aaaaaagtgaaagatcaattacttcagtcagcagaggtgcgagtgagcgctgttgtggag
agccacccatccatccaggattacatgtttgacacygaaaatgagctttggtgtgaggtt
tctgtggcattgccactaacaaaggtgtattttgacctctcctccctgctggcatccctg
gcrcgcagcaccgtgatccacgaggtgaagggcatcacacggtgcctgctcaatgaaagt
accaacaaggagggacagaaggaattcgttctccacaccgaagggataaacctggcagag
ctgttcagatattctgatattctggacctgaacaggctttattgcaatgatatccatgcc
atggctaagaattacggaattgaatcagccctgagagtgattataaaggaaataaaagat
gtrtttgctgtatatggaattgtggtagaccctcgacacctttcacttgtggcagattac
atgtgttttgaaggaatttacaaaccactgaatcgttttggaattcagtccaactcctcc
cctctacaacagatgacgtttgaaaccagctacaaattcttgaaggaagcaacaatgatg
ggtgcccatgatgagctgcgatccccttcggcctgtctggtggttggaaaagttgtcaaa
ggagggactggcttgtttgacctcaagcagcccctgacatag
DBGET
integrated database retrieval system
