Candidatus Mycobacterium methanotrophicum: M5I08_05450
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Entry
M5I08_05450 CDS
T08748
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
mmeh
Candidatus Mycobacterium methanotrophicum
Pathway
mmeh00190
Oxidative phosphorylation
mmeh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmeh00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
M5I08_05450
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M5I08_05450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmeh03019
]
M5I08_05450
Enzymes [BR:
mmeh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
M5I08_05450
Messenger RNA biogenesis [BR:
mmeh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
M5I08_05450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
UQX11856
LinkDB
All DBs
Position
complement(1004927..1007158)
Genome browser
AA seq
743 aa
AA seq
DB search
MTEIEATEAIEATEATEGGAEAVTATSGEARPDGRAWRPDDSAPAAPPAATAALIEDELP
EHRYLNRELSWLDFNARVLALAADTSLPLLERAKFLAIFASNLDEFYMVRVAGLKRRDEM
GLSVRSADGLTPREQLRRIGEQTQYIASRHARVFLDSVRPGLVKEGIHVVTWADVDEAER
HRLSTYFTEQVFPVLTPLAVDPAHPFPFVSGLSLNLAVTVRKPQDGGQHFARVKVPDNVD
RFVDLDDGQRNNGKTEVRFLPMEELIAAFLPTLFPGMEIVEHHAFRITRNADFEVDEDRD
EDLLQALERELARRRFGSPVRLEVADDMTEHMLELLLRELDVHPGDVIQVPGLLDLSSLW
QIYDIDRPALKDPTFVPATNPAFAERETPKSIFATLREGDVLVHHPYDSFSTSVQRFVEQ
AATDPDVLAIKQTLYRTSGDSPIVRALTEAAAAGKQVVALVEIKARFDEQANIRWARTLE
QAGVHVAYGLVGLKTHCKTCLVVRREGSAIRRYCHIGTGNYNSKTARLYEDIGLLTADPD
IGADLTDLFNSLTGYSRKLDYRNLLVAPHGIRTGIIERVEREIAAHHQSGNGWIRLKMNA
LVDEQVVDALYRASRGGVRVQVVVRGICALRPGVEGFSENISVRSILGRFLEHSRILHFR
ALDEFWIGSADMMHRNLDRRVEVLAQVKDPRLTAQLNDIFESALDPATRCWELGPEAQWT
ALPHAGHTVRDHQVSLMERHRSS
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaaatcgaagctaccgaagctatcgaagctaccgaagctaccgaaggcggcgcc
gaagccgttacggccacctcaggcgaggcgcggcccgacgggcgcgcatggcgaccggac
gactcggcgccggccgcaccgcccgctgccaccgcagccttgatcgaggacgaacttccc
gagcaccgctacctcaacagagaactaagctggctggacttcaacgctcgcgtattggcg
ctggccgccgacacctcgctgccgctgctggagcgggcaaagttcctggcgatcttcgcc
tccaacctcgacgagttctacatggttcgcgtcgcggggctgaagcggcgcgacgaaatg
ggtctgtcggtacgctccgcggacggtctgaccccgcgtgagcaactgcgtcgcatcggc
gagcagacccaatacatcgccagccggcacgcacgggtcttcctcgattccgtgcggccc
gggttggtcaaggaaggtatccatgtcgtcacgtgggcagatgtggacgaggctgagcgg
caccggctatcgacctacttcaccgagcaggtgtttcccgtcctcacgccgctggccgtc
gatcccgctcacccatttcccttcgtcagcggcttgagtctcaacctcgcggttacggtc
cgaaagcctcaggacggcggccagcacttcgcccgggtcaaggtgcccgacaacgtcgat
cgtttcgtcgacctcgatgacgggcaacgcaacaacggcaagacagaagtccggttcttg
ccgatggaagagctgatcgcggccttcctcccgacgctgttccccggtatggaaattgtc
gagcaccacgcgttccgcatcacccgcaatgccgatttcgaggtcgacgaggatcgcgac
gaggatctgctgcaggccctcgagcgggagctggcgcgtcgacggttcggatcgccggtg
cgcctcgaggtggccgacgacatgaccgagcacatgttggaactgctgttgcgcgaactc
gacgtgcatcccggtgacgtcatccaagtgccggggctgcttgacctgtcgtcgctatgg
cagatctacgacatcgaccggccggcactgaaggatcccacattcgttccggccaccaac
ccggcgttcgccgagcgggaaaccccgaagagcattttcgcgacactgcgcgagggcgac
gtgttggtacaccacccctacgactcgttctccactagcgtgcaacgatttgtcgagcaa
gcggccaccgatcccgatgtgctggcgatcaaacaaacgctgtaccgaacgtcgggtgat
tcaccgatcgttcgggcgctgaccgaagccgccgccgccggaaagcaagtcgtggcgctg
gtcgagatcaaggcacgattcgacgagcaggccaacatccggtgggcacgcacgttggag
caggccggagttcatgtggcgtacggccttgttggcctgaaaacgcattgcaagacttgt
ctggtggtgcgccgtgaaggctcggcgatccggcgctactgccacatcgggaccggcaat
tacaacagcaagaccgcccggctctatgaggacatcggcctgctgaccgccgaccccgac
atcggcgccgacctgaccgacttgttcaactcgctgacgggctattcgcgcaagctggac
taccgcaatcttttggtggcaccgcacggtattcgcaccggcatcatcgaacgcgtcgag
cgagagattgccgcccatcaccaatccggcaatggatggatccggctcaagatgaacgcg
cttgtcgacgagcaagtcgtcgacgcgctctatcgggcctcccgaggcggagtgcgcgtc
caagtggtggtgcgcggaatttgtgcactgcgccccggcgtcgagggcttctccgaaaac
atttcggtgcgctcgattctgggccgtttcctggagcactcgcgaatcctgcatttccgc
gccctcgacgaattctggattggcagcgccgacatgatgcaccgcaacctcgatcgccgg
gtcgaagtgctggctcaggtgaaagaccccaggctgaccgcacaactcaacgacatattc
gaatcggcgctggacccggccacccgctgctgggaactggggcccgaagcacagtggacg
gcgttaccgcacgcgggtcacacggttcgcgaccaccaggtttcgctgatggaacgacac
cgaagctcctga
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