Mesorhizobium mediterraneum: LRP31_13155
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Entry
LRP31_13155 CDS
T09205
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
mmei
Mesorhizobium mediterraneum
Pathway
mmei00540
Lipopolysaccharide biosynthesis
mmei01100
Metabolic pathways
mmei01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
mmei00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
LRP31_13155 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
mmei01005
]
LRP31_13155 (rfaD)
Enzymes [BR:
mmei01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
LRP31_13155 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
mmei01005
]
Core region
LRP31_13155 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
WIW56032
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Position
complement(2721918..2722868)
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AA seq
316 aa
AA seq
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MIIVTGGAGMIGSNIVAALNAEGISDILVVDDLTDGHKIANLGDLQIADYLDKDDFLPRM
EAGDLGRIEAVFHQGACSTTTEWNGRFMMEVNYAYSKRLLHACLALRVPFLYASSASVYG
GGAEFREEPECERPLNVYAYSKKLFDDYVRRTVFDTDHSPVAGLRYFNVYGPREAHKGAM
ASVAFHLFNQVEQGQNPKLFGAYEGFGPGEQSRDFIHVGDVADVNLWLWKRGLSGIFNCG
TGLAQPFRAIAETVIGALGKGEIEFIDFPDHLKGSYQSFTQADMSRLRAAGYNGQFRTVE
TGVRDYVEWLKAQRSS
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgtcacgggcggcgccggcatgatcggctccaacatcgttgccgctctcaac
gccgaagggattagcgacatcctcgtcgtcgacgacctgaccgacggccacaagatcgcc
aatctcggcgatctgcagatcgccgattatctcgacaaggacgatttcctgccgcggatg
gaggcgggggaccttggccgcatcgaggccgtcttccaccagggcgcctgctcgaccacc
accgagtggaacggcaggttcatgatggaggtcaactacgcctattcgaagcggctgctg
catgcctgcctcgcgctgcgggtgcccttcctctacgcctcctccgcgtcggtctacggc
ggtggcgccgagtttcgcgaggagccggaatgcgaacgcccgctcaatgtctatgcctat
tcaaagaagctgttcgacgactatgtccgccgcaccgtcttcgataccgatcattcgccg
gtggcgggcctgcgctatttcaacgtctacggaccgcgcgaggcgcataagggcgccatg
gcctcggtcgccttccacttgttcaatcaggtcgagcaaggccagaacccgaagctgttc
ggcgcctatgaaggtttcggacccggcgagcagagccgcgatttcatccatgtcggcgat
gtcgccgacgtcaatctgtggctgtggaaacgcggcttaagcggcatcttcaactgcggc
accggccttgcccagccgttccgcgccattgccgaaacggtgatcggcgcgctgggcaaa
ggcgagatcgagttcatcgacttccccgaccacctcaagggcagctaccagagctttacg
caagctgatatgtcccggttgcgcgccgccggctacaatggtcagtttcgcacagtggaa
accggcgtcagagactatgtcgaatggctgaaagcccaacgatcctcgtga
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