Mercenaria mercenaria (northern quahog): 123522947
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Entry
123522947 CDS
T07835
Name
(RefSeq) ribosome biogenesis protein SPATA5L1-like
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mmer03009
]
123522947
Enzymes [BR:
mmer01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
123522947
Ribosome biogenesis [BR:
mmer03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
123522947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_5
RuvB_N
AAA_22
DUF815
AAA_14
Rad17
TIP49
RNA_helicase
ABC_tran
AAA_18
Viral_helicase1
AAA_33
AAA_11
AAA_19
AAA_28
nSTAND3
Mg_chelatase
AAA_24
DUF1391
Motif
Other DBs
NCBI-GeneID:
123522947
NCBI-ProteinID:
XP_045156420
EnsemblRapid:
LOC123522947
LinkDB
All DBs
Position
8:complement(18284939..18302279)
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AA seq
806 aa
AA seq
DB search
MTQLEMEMVELNVKSTSDLKEFHQKCMMSLDVFQRIGASIGCFLEISTNNESCICSVWPK
QDFDSCTMIYNSLVFCTRMSYLNGNVDGRTGTDAEDFNTGIEKSVLENNSDAKEFSLKAN
SMIKVLHTLKASEICVDVVVLKPDKVRESRSEFFMKLLQTYCRNLLLRLCVRHSFIVNCT
SSRPARNYGISHIIVKHVNSEGDLRCDTGFVVHKLTKITVETVHSREWFDQMTETQISLK
RPGGLDSVIEMLLDLIKLPLQQKETFKQLGAHPPRGVLLCGPPGCGKTSLVKYICAVNNI
FLVTVNGAEIFGPRPGETETNLSQVFQKITIMSEEGPCILFIDEIDSLCPSRDRAGNVNE
ARATARFLALMDGLTDDDDVLVIGATNRPVALDPALRRPGRLDREVMLSPPTRLQRLEIL
RSKVKDIPISSDLDLEQLAELTNGYVGADLASLCHEAAYLAMSESAGGRKTLVSQCHFQA
AVKKMRPSLQKGAEGVVDLRPVHWSDIGGLDTVKEQIKQAVEWPLQHPEAFERMGLKPPR
GVLLYGPPGCCKTTLVRAAATSCHSTFLSISGAQLYSPFVGDSEKLITEIFQKARACAPS
ILFLDELDSIVGKRSETGQRGVQERILSALLNEMDGIGVRLGDGSTSSQQQKTLEGQSVT
GERKTDVKAVDNRSVLVVAATNRPDLIDDALMRPGRMDRIIYVQHPDLQARKDIFKLYTR
NMQLESCDLDLLAERTDMYTGADLEAVCREAALYALTENIDTCTVCKEHFEKALKVVPPS
LNTKLIQKYSTATDSMRTGKIIEGIS
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgacacagctagaaatggagatggttgaattgaacgtaaaatctacttcggacttaaaa
gagttccaccaaaaatgcatgatgagtctagatgttttccagagaattggtgcaagtatt
ggttgttttttggagataagtacaaacaatgagtcatgcatttgttcagtttggcctaaa
caggattttgactcgtgtacaatgatatacaatagcttagtgttttgcacaagaatgagc
tatctaaatggtaatgttgatggtagaacaggaacagacgcagaagactttaatactggt
attgaaaaatctgttttggaaaataattcagacgccaaggaattttccctaaaagctaat
agtatgattaaagttttacatactttaaaagcttcggaaatttgtgtggatgtagtggtg
ttgaaacctgataaggttagggaaagtagaagtgaattttttatgaagctgttacagact
tattgtagaaatttgttgttaaggctttgtgtaagacattcttttattgtaaactgcaca
tcttcaagacctgcaagaaattatggaatatcccacatcattgtaaaacatgttaactca
gaaggtgatttaagatgtgatactggttttgtagttcataagttgaccaaaattactgtt
gaaactgtacatagcagggaatggtttgaccagatgacagagacgcagatatcattaaag
agacctggaggattggacagtgtgattgagatgttgttggatttgattaagttaccattg
cagcagaaggagacattcaagcaattaggagcacatccacctagaggagttctgttgtgt
ggccctccaggttgtgggaaaacctcactggttaagtatatttgtgctgtgaataatata
tttcttgtgacagtaaatggtgcggagatctttggaccccgtccaggtgagacagagaca
aacttgagtcaagtgtttcagaagataactataatgagtgaggagggaccatgtatattg
tttatagatgaaatagattccctttgtccaagtagggacagagcaggcaatgttaacgag
gcacgtgccacagcaaggtttctagcattgatggacggtttgacagacgatgatgacgtt
cttgttattggtgctacaaacagaccagtagcactggatccagcactccggcgaccaggg
agactggacagggaggtcatgttaagtccaccaacacgcctgcaaaggttagagatcctg
aggtcaaaggtcaaggacattccaatatctagtgaccttgaccttgaacagttggcagaa
ttgaccaatggctatgtaggtgcagacttagcttcactgtgccatgaggcagcttatctg
gcaatgtctgaatctgctggtggcaggaaaacactggtaagtcagtgccatttccaggct
gcagtgaagaaaatgcggccatctttacaaaaaggggccgaaggtgttgttgatctacga
ccagtccattggtcagatataggtggtttagacacagtaaaggaacaaataaaacaggca
gtagaatggccactacagcacccagaggcatttgaacgtatgggtttaaagcctccgaga
ggtgtattgctgtatggtcccccgggctgctgcaagacgactctggttagagcagcagct
acgtcctgtcactcaactttcctgtcaattagtggagctcagctgtactctccttttgtt
ggagactctgaaaaactcatcactgagattttccaaaaggcaagagcttgtgcaccatct
attctgtttctggatgagttagactctatagtaggaaagaggtcagagacgggacagcgt
ggagtacaggaacgtatcctctcagctctactcaatgagatggatggtataggtgtccgg
cttggcgatggttcaacatcaagtcagcaacagaagactctagaaggacagtctgtaacc
ggggaaagaaagactgatgttaaagctgtagacaacagatcagtgcttgttgttgcagca
acaaatcgaccagatcttatagatgatgctttaatgaggcctggcaggatggatagaatt
atctatgtacaacatcctgatctacaggcaaggaaggacatatttaaactgtacacaaga
aacatgcagttagagagctgtgaccttgaccttctggctgagagaacagacatgtacact
ggagctgatctagaggctgtttgtagagaggctgccctatatgcactcacagagaacata
gatacatgtacagtttgtaaggaacattttgagaaggctttgaaagttgtaccgccttca
ctgaatacaaaactcattcagaaatactccacagctacagacagtatgagaactggcaaa
atcatagaaggaataagttga
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