Mercenaria mercenaria (northern quahog): 123528907
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Entry
123528907 CDS
T07835
Name
(RefSeq) uncharacterized protein LOC123528907 isoform X1
KO
K02599
Notch 1
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
123528907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_2
EGF
GPS
Cadherin
EGF_3
fn3
hEGF
DL-JAG_EGF-like
Frizzled
GAIN
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
123528907
NCBI-ProteinID:
XP_045164913
EnsemblRapid:
LOC123528907
LinkDB
All DBs
Position
13:46482370..46527391
Genome browser
AA seq
1622 aa
AA seq
DB search
MSASRVLLQLTVVIYHTYILVEGNAQITVTPFPALIFHGAVQNVPVLSVTATDTDTGQPL
QSVALTNSRDSDYFKLIQQPRVPNEWILKVKKTIDKPVGYVFTFSVYGYYNQTPQDRRIQ
INVTEENEHAPSFEQQEYTFVALRNGLDYNLTDIGTVKAVDADTEIYNKQFHYHILDPHA
ERYFLVDLETGLIEMTGNIPAGVSNVTFSVTAIDGGSPQRLNTTDVTVIITDLRPPDVFC
VAVEESIARVCWKDPTNGSYVMKYELLFKMDDQNATTVPVRVEGVKDETCSIVTGNQLGR
NYTFSVRVFNGLEWSPESLQRKVTIEKKGLYGSCPDFSNCSVWEPCQNKGECLVNQDMSY
TCNCSKGWGGVNCTDVDLCASAPCRNGGTCVFTGDRNYTCNCPDTHYGNVCEYFNICSTI
PCKNDALCMNGNNTFTCICRDHFVGELCETPDPCVPSPCMHGNCSSANNKNFSCSCQNGY
FGDLCENEDICALYQPCNQGSCTANNVSSEIADDKYTCSCNVGYRGKRCDNLDMCELTSM
NGMELCRNNGTCHYKEISSYNCVCADGFWGAECQYYDPCYDKPCGTGNCKNVSDEEYICE
CHGGNFGRNCEHFNPCYDKPCHSNIQCLNISDTDYRCICPVERFGKNCEKINGCNINFCH
HNSSCLNVTEAGGVECVCQSGYSGKFCDIYDPCLLQPCMNNASCSSSSGEFTCACVSGYR
GDKCQYTDPCAENPCWNEGTCVQSATNVTKYRCLCENIFYGTHCENLDFCKLGHDCENGG
TCIIQEGREAYEIELRGNLTSSNQVNVTNRPTCVCLHGYSGDRCDKISPCVQSPCGKGHC
VQKGEGHVCNCPDGIVRISCEEVFCEIDDSFYDKTGWYTWPRTKAGDTTQVLCRHGPNSI
FSTGYASRYCNVDVNGTTFWDIPNTSQCLELQTEDVSQNLRNLATLTKDASGLRSEEIAN
ITSTLEEYFFFSFENIEIAKEMTMVVGNLLDANETVMIESNFKNHSSERLLWLLEEYSKR
VNTTGEIVIETENINLQVVNHTVPDTSYSYTPQLEQNNIKRKGGINLKLPAEALTSSDAE
EFPRIRLMTFRSSSFFIPEEAPPQEVVMKQWVVSAVVQDRKLENLTTPVEITVKNIEDGV
NHSCAYWDIKNRTWSDEGVVTLERGQNYTKCLSYHLTSFAILLDPSPDHALSAEHEQILT
YISYIGCGISMLGLILTLITYSIFRPRSASMSRCLNREKSGKILMNLCASMLLLNAFFFL
GSETSLSLSGDGMCKAAAILLHYFLLTTLTWMLVEAINMYQALITVFTKYSGFFMLKRCI
FAWGAPALIVIATVAISVDNYKTTTELCFLSQGNPLAFYIALLGPACLILLINFAVFIMV
SRVILKPKFHGQVGRNASDSVTPAQIRGAFTVMTLLGVTWVFGPFAINEAKVVVNYIFTV
LNSLQGFLIFVFRCCFNPEVRMAWVMLIKTGKFKRRKGPATAYTSDSTSSKSESKLNGSV
NDTMKSNVYNSLGKQRNVLNNDKNLVSKNTNMQAKTSKDLHGYFDDTQRHRGREKRSGSS
ENTRLYGRNYDNYDRNGFHSNGNHQRRSSDQNAITTIYTGQYNGGVKRHSGLISHQDEFT
RL
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcttcaagagttttgctacagcttacagtcgtcatatatcatacatacatactt
gttgaaggtaatgctcagattacagtgactccatttccggctctgatttttcatggtgct
gttcaaaacgtacccgtcctctcggtgactgccacagacaccgatacaggccaaccccta
caaagcgttgcccttacaaacagtagggattcggactatttcaagcttatccaacaaccc
cgggtacctaatgaatggattctaaaggttaaaaaaacaatagacaaaccagtagggtac
gtatttacattcagcgtgtacgggtactacaaccagactccacaagaccgacgtatccag
atcaatgttacggaagagaacgagcacgcaccgtcatttgaacagcaagagtacacgttc
gtggctttaagaaacggtcttgattacaacttgacagatataggaaccgtaaaagcggtt
gatgcagacacagaaatttataataaacagtttcattatcatatacttgatccacatgct
gagcggtattttctagttgatctggagacaggcctcatcgagatgacgggaaatattcca
gctggagtcagtaacgtaacgtttagcgttacggcgatagacggcgggtcaccgcagcgg
cttaatacgaccgatgttaccgtaataattactgatctccggccaccggatgtattttgt
gtggcagtagaggaatccattgcaagagtctgttggaaagacccgactaacggaagttac
gtcatgaagtacgaacttcttttcaaaatggacgaccagaacgcgacgacggttcccgtt
cgcgtagagggcgtaaaggatgaaacatgcagtatagttacaggaaaccagcttggccgg
aactatacattctctgtgcgtgtctttaatggattagaatggagtccagaaagtcttcaa
agaaaagttacgatcgaaaagaaaggtctgtatggaagttgtcccgactttagcaactgc
agcgtctgggagccatgtcaaaacaaaggggagtgtctcgtgaatcaggacatgtcttac
acgtgcaactgttcgaagggatggggcggagtcaactgcacggacgtggatctttgtgca
tcggcaccgtgtaggaacgggggcacgtgcgtgttcacgggggataggaattacacatgt
aattgtccagacacacattacggtaatgtttgtgaatatttcaatatatgttcgactatt
ccttgtaaaaatgatgcactttgtatgaatggaaataatactttcacatgtatttgtcga
gatcattttgtaggagagctatgtgaaacgcctgacccgtgcgtaccgtcaccttgtatg
cacgggaattgttcttcagccaataacaagaacttcagttgttcttgtcagaacggctac
tttggtgatttatgtgaaaatgaggatatatgtgcgctttaccagccttgcaatcagggc
tcgtgcacggcaaacaatgtatcttcagaaattgctgacgataaatatacgtgctcgtgc
aatgtcggatatcgcgggaaaaggtgtgacaatttagatatgtgtgagctaacttcaatg
aatggtatggaattgtgtagaaataatggaacctgccattataaagaaataagttcctac
aactgcgtttgcgctgatggattctggggtgcagagtgccagtactatgacccttgttac
gacaagccctgtggaaccggaaactgcaaaaacgtgtcggatgaagaatacatttgtgaa
tgtcatggtggaaattttggaagaaattgtgaacattttaacccttgctatgacaaacca
tgccattcaaatattcaatgtctgaatatttctgatacagactatagatgtatctgtcca
gtagaaagatttgggaagaactgcgaaaagataaatggatgtaatattaatttctgtcac
cacaattcgtcatgtctgaatgtgactgaagcgggtggtgtcgaatgcgtttgccaatcg
ggatattcagggaagttttgtgacatttacgatccgtgtcttttgcagccatgcatgaac
aacgcatcttgttcaagctcttccggtgaattcacttgcgcatgcgtatctggttaccga
ggtgataaatgccagtataccgatccatgtgcggaaaatccgtgttggaacgaaggtacg
tgtgtacaaagtgccacgaatgtaacgaaataccggtgtttgtgtgaaaacatattttat
ggaacgcattgtgaaaatctggatttctgtaaacttggccacgattgtgaaaatggcggt
acttgtatcatacaggagggccgagaggcttatgaaattgaactgaggggaaaccttacc
tcttcaaatcaggtcaatgtcacaaatcgtccaacttgcgtatgtctccatggttactct
ggagatcgttgtgacaagatttcaccttgtgttcagtctccgtgtggtaaaggtcattgc
gtgcagaaaggcgaaggtcatgtctgcaactgtccagacggaattgtgcgcatcagctgc
gaggaagtattttgtgaaattgacgactcattttatgacaagaccggctggtatacctgg
ccaaggacaaaagcaggggacaccacccaggtgctctgcagacatggccccaacagtata
tttagtactggatatgcctcgcgctactgtaatgttgatgtcaacggtacaactttctgg
gacattccgaacacttcacagtgcttggaacttcaaacggaagatgtgagccagaacctt
cgcaacttggccactctgacgaaggacgcttccggtctaagatctgaggaaattgcaaac
atcaccagcaccctcgaggagtatttcttcttctcttttgaaaatatcgaaatcgcaaag
gagatgacaatggttgtagggaacttactggatgccaatgaaacagtaatgattgagagc
aacttcaaaaaccactccagtgaaaggttgctatggttactagaagagtattctaaaaga
gttaacacgactggtgaaattgtcatagaaactgaaaatattaacttgcaagttgtgaac
catactgttccagacacaagctacagttatacgcctcaacttgaacaaaataacatcaaa
agaaagggtggcattaacctcaagctgccagcagaagctctgacatcatcagacgcggag
gaatttcctcgtatccggctgatgacatttcgttcgtcgtccttctttataccggaagag
gctccgccacaggaagtagtcatgaaacagtgggttgttagcgccgtagtgcaagatcgc
aagctggagaaccttacaacacctgttgaaataactgtcaagaatattgaggatggtgta
aatcattcatgcgcttactgggatataaaaaatcgaacttggtcagatgaaggtgttgtt
acccttgaaagaggacaaaactataccaagtgcttatcctaccatctaacaagtttcgca
atcttgcttgacccaagccctgaccacgccctttctgctgagcacgagcagatattgacg
tacatatcatacattggttgtggtatatcaatgttagggctaattcttacacttattaca
tactctatattccgccctcgttctgcatcaatgtctagatgtctgaatcgtgaaaagtcc
ggcaagattctgatgaacctttgtgcctccatgttgctcctgaacgccttcttttttctt
gggtctgagacatctttatcactgtctggagacggcatgtgtaaggcggccgccatcttg
cttcactacttcctgttgaccacactcacttggatgcttgttgaggcgatcaatatgtac
caggcgcttattaccgttttcacaaaatattccggatttttcatgctgaaaagatgcata
tttgcatggggggctcctgctttgatagtcattgcaacagtggctattagcgtagacaac
tacaaaactacgacagaactgtgcttcttatcacagggcaaccctctggctttctacatt
gctctccttggtcctgcttgtctgatcctcctcatcaactttgccgttttcatcatggtt
tctcgcgtcatcttgaagccaaagttccatggtcaagttggaaggaacgcgtctgattcg
gtaacgcctgcgcagattcgcggcgcattcaccgtaatgacgcttcttggagtcacgtgg
gtctttggaccgtttgccataaatgaagccaaagttgtggtaaactacattttcacggtg
ttaaactctttacaagggtttctaatctttgtgttccggtgttgttttaacccggaagta
agaatggcttgggtgatgttgataaaaacgggtaagttcaagagaaggaagggcccagcc
actgcttacacctctgactctacttcctccaaaagtgagagcaaacttaatggaagtgtt
aatgatacaatgaaatctaatgtatataacagtcttggaaagcagcgaaatgtattaaac
aatgacaaaaatctggtttccaagaatacaaatatgcaagccaaaacatctaaagatctc
catggttactttgacgacacgcaaaggcaccgaggacgtgaaaaaagaagtggaagttcc
gagaacacaagattgtacgggagaaactatgacaattatgatcgaaatggtttccatagt
aacggaaatcaccaaagacgttctagcgatcagaacgccattactactatatacacgggc
cagtataacggtggggtaaaaaggcattctgggttgatatctcaccaggacgagtttaca
agactttga
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