Mercenaria mercenaria (northern quahog): 123529273
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Entry
123529273 CDS
T07835
Name
(RefSeq) microphthalmia-associated transcription factor-like isoform X1
KO
K09105
transcription factor E3
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
123529273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmer03000
]
123529273
Transcription factors [BR:
mmer03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
123529273
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
HLH
ELP6
Motif
Other DBs
NCBI-GeneID:
123529273
NCBI-ProteinID:
XP_045165466
EnsemblRapid:
LOC123529273
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All DBs
Position
13:67583594..67622327
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AA seq
512 aa
AA seq
DB search
MVVTVCSPDPEGQSNSQDPHRGAQSPEIPQENSDSQARFNFDPTETVIVVRRKKDPGGRE
NSVMLKSLLKQKSLLTNNNIKGGRIEKVRVVKSPKTTEIKNASMAMRTNLKLQLMRQQAE
EEEKRERQYSQSLKTSYIPTSGIDVPPQTSHTSEVPPQVLQVRTKLENPTRYHVIQKQKN
QIESYLSQSQGNHTGIQSMPNVRLTSTSDIPQHMHSGSAPVDPDSPLSVGMSSTATSISE
VESILNDLQDLESVDTNFDDDLKFITPSLVQMSSTNPATNDYVFTPVGAAVTSAKSAPTV
LPGQRIATPTSFLTEDDARMWAKERQKKDNHNMIERRRRFNINDRIKELGTMLPRHIDPD
LRQNKGSILKASVDYIKKLKRDQERLKQIEEKQRQTELQNRKMMLRVQQLELLMKAQGLN
TGFSDDIHSLTTLVQPNTVNNLTVRQQQVRQERNNSAPNFQNIQQDIPVTVATTLNLDDI
MDDSSSGLSADPMLSSHPVSPSMDDESMDYGL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggtagtgacagtgtgttcacccgaccccgagggtcagagcaacagccaagacccgcac
cgtggagcccagagtccagaaatcccacaggaaaacagtgacagccaagccagattcaac
ttcgaccccacagagactgtgatagttgtcagaagaaaaaaagatcccgggggtcgggaa
aacagtgtcatgttgaagagtttgctcaaacaaaaatctttattgactaacaataatatt
aaaggtggacggatagaaaaagttcgtgtggttaaaagcccaaagacaacagagatcaaa
aatgcatcaatggcgatgcggacgaatctcaagctgcagcttatgcgacaacaagctgaa
gaagaagaaaaacgagaaaggcagtattcacagtccctgaaaacatcgtacattccaacc
agtggtattgacgtaccgcctcaaacatcacatacatcggaagttccaccacaagttcta
caggttagaacaaagttggaaaacccgactcgttaccatgttatacagaaacaaaaaaat
caaatcgagtcataccttagtcagtcgcagggtaatcatacaggtatacagtcgatgcca
aatgtcagacttacatcaaccagtgacattccacaacatatgcacagtggtagtgcacct
gttgaccctgatagtccactgtcagtgggcatgagtagtacagccacaagcatctctgag
gttgaaagtattctcaatgaccttcaggatcttgagtctgtggacactaatttcgatgat
gatctcaaattcattacgccgtctcttgttcaaatgtcgtctacaaatcctgccactaat
gactatgttttcaccccagtcggtgcagccgttacctcagcaaagtctgctcccactgtt
ttaccaggacagagaattgccacacctacttctttcctcacagaagatgatgcaagaatg
tgggcgaaagaacgtcagaagaaagacaaccataacatgattgagagaaggaggagattt
aatattaatgacagaatcaaggaactcggaacgatgcttcctagacatatagaccctgat
ttacggcagaataaaggttcaatattaaaggcatctgttgattatattaagaagttaaaa
agggatcaagaacgtcttaaacaaattgaagaaaaacagagacaaacagagttacagaac
aggaagatgatgctgagagtacagcaacttgaattgttgatgaaagcccagggcttgaac
acaggattctcagatgacatccacagtcttacaactcttgtccaaccaaatactgtaaat
aatttgactgtaaggcaacaacaagttagacaagaacgaaacaattctgcaccaaatttt
caaaacattcagcaagatattccagttactgtagcaacgaccttgaacttggatgacatc
atggatgatagttcatcaggactctcagctgacccgatgttatcgtcacatcctgtgagc
ccaagtatggatgatgagagcatggattatggcttatga
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