Mercenaria mercenaria (northern quahog): 123530999
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Entry
123530999 CDS
T07835
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2-like
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123530999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmer03021
]
123530999
Enzymes [BR:
mmer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123530999
Transcription machinery [BR:
mmer03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
123530999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
TTHB210-like
Motif
Other DBs
NCBI-GeneID:
123530999
NCBI-ProteinID:
XP_053373451
EnsemblRapid:
LOC123530999
LinkDB
All DBs
Position
11:complement(54403750..54487543)
Genome browser
AA seq
1133 aa
AA seq
DB search
MEKLPNFKNLTASDYGRHKETQNQNIQDLVRPHIESFNCIIHEGLGKIIENSLPVEFSLP
NGDRVSLTLQDIIIGSPKVHEKAVCRTTKVYPAECRSRGASYKGPLQVQIGFRVNGQAGP
PIPKVLGQIPIMVKSEICNLSRLTPQQLVKHGEEAEEMGGYFIVNGIERLVRMIILPRRN
YPICLTRGGWRKRGAMFSDYGVMLRCVRSDHTATNMVLHYLNNGTAQLCFFHNQELFFAP
IVMILKGLMSVPDKYIYDELVKGKEEDSFYKGCVVAMLRQALNEDLLTKESVLKYIGSRF
RVKLALPEWKTDEEVGQYLLKQCICVHLTSDVDKFNLLVYMTRKLFDFAKGKCAAENGDS
PMLQEVLLGGHLFQMFLKEKLDGYLQTIKSVIERQAKAFKGGSDRYKLTQDSLINALRYG
PDICKSFEYLVATGNLVTKSGLALMQYSGMTVVADKLNFMRYISHFRCIHRGAFFAQMRT
TAVRKLLPEAWGFLCPVHTPDGSPCGLMNHATAMCQFQVFTFHQSIRKALDTVGVCSLDN
PPCPIKDCYTVMLDGRIVGYVSEEMAPQVEQKLRVMKVKGLHKVPPTIEICLVKKTKYAS
QYPGLYLFTTPARMVRPVKNLALDAVEMIGTFEQVYMDICINQSEAYQGITTHEELDGVS
MLSVAANLTPFSDFNQSPRNMYQCQMGKQTMGVPLHALKYRSDNKLYKLQTPQTPVVRPT
KYDHYDIDSYPLGTNAIVAVISYTGYDMEDAMVINKGSFQRGFGHATVYKTEVINLAEIA
KTTPLIFSASVTSKSYLNGEVDIDGLPYIGRCIMPNTVYYSYVNTQSGEESVRLYKNQEP
AYVEHIKLLGNDTGTSGKSKVAIMLRINRNPIIGDKFASRHGQKGVCSMMYPVENLPFTE
SGMTPDIIFNPHGYPSRMTIGMMIESMAGKSAASYGHCYDATPFQFSEDDPAIDHFGNML
VKAGYNYHGTERFYSGIDGRELEASIFMGVVYYQRLRHMVSDKFQVRTTGPVDQVTYQPV
KGRKRGGGVRFGEMERDALISHGTSFLLQDRLLNCSDKSMAPVCTECRSLLSVYMEKRAP
ATAAASFEKQRQWSCLHCNSGRHIEIVSVPYVFRYLVAELAAMNIRLELDVQG
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagttgccaaattttaagaatttaactgccagtgattatggcaggcataaagag
acacaaaaccagaacattcaggatcttgtaagaccacacatcgaatctttcaattgtatt
atacatgaaggtctaggcaaaatcattgagaattcgttacctgtggaattttccttgcca
aacggtgacagagtgtcactaactttacaggatatcattattggaagtcccaaagtgcat
gagaaggcagtatgcagaactacaaaagtatacccagctgagtgtagatcacgaggtgca
agttacaaaggccccctacaagtgcagattggtttcagagttaatggacaagcagggcct
cccatacccaaagttcttggtcagattcctatcatggtcaagagtgaaatatgtaatcta
tcgagactgacaccacaacaactagtaaaacatggtgaagaggcagaggaaatgggtgga
tactttattgtaaatgggatagaacgtctggttagaatgataattttaccaagaagaaat
tatcctatctgtttgacacgtggaggctggaggaagcgtggtgccatgttttctgactat
ggtgtaatgttgagatgtgtaagatccgatcatactgcaacaaacatggtgttacactac
ctaaacaatggaacagcacagctatgtttcttccacaaccaggaactcttctttgctcct
attgttatgattcttaagggtcttatgtcagtaccagacaaatatatctatgatgaattg
gtgaaaggtaaagaagaggactccttctataaagggtgtgttgttgctatgttacgccaa
gctttaaatgaagatctgctcaccaaagaatctgtgttgaaatacattggctctagattt
cgtgtaaagcttgcattgccagaatggaaaacagatgaagaagttgggcaatacctattg
aaacaatgtatatgtgtacacctgacaagtgatgttgacaaattcaaccttttagtgtat
atgacaagaaaactgtttgactttgcgaagggtaaatgtgcagcagagaatggcgacagt
cctatgttacaggaagtattgctaggtggccatctattccagatgtttcttaaggagaag
ctagatggttatttacagaccataaaatctgtgatagaaagacaagcaaaggcattcaaa
ggaggaagtgacagatacaagcttacccaagattctctaataaatgcattgaggtatgga
cctgatatctgcaagtcttttgaatatttagttgcaactggaaaccttgtcaccaaatct
gggttagcactaatgcagtactctggtatgactgttgttgcagacaagctcaactttatg
aggtatatttctcatttccgttgtatacatagaggagctttctttgcccagatgagaaca
acagctgtcaggaaacttctgccggaagcctggggtttcctgtgtccagtacatacccca
gatggttctccatgtggactgatgaaccatgccacagcaatgtgccagtttcaggtgttt
acatttcatcagtcaataagaaaagccctagatacagtaggtgtatgctcattggataat
ccaccttgtccgattaaagactgttacactgtgatgctggatgggaggattgtgggatat
gtcagtgaggagatggcaccacaggttgaacaaaagctacgagtaatgaaagtaaaggga
ctacacaaggtaccgcctacaatcgagatatgtttagtaaagaaaacaaagtatgctagt
caatatccaggtctgtatctgttcacaacaccagctagaatggtacgcccagtgaagaac
ctcgctctcgatgctgtagagatgatcggcacatttgaacaggtttacatggatatttgc
atcaaccagagtgaggcttatcaagggataacaacccatgaggaactggatggtgtcagt
atgttgtcagttgctgccaatttaacaccattttctgacttcaatcagagtccaagaaat
atgtaccagtgccagatgggtaagcagacaatgggggtaccattacacgccctcaagtac
aggtcagacaacaagctgtataaactacagactccacaaacccctgtggtgagacccaca
aagtatgaccattatgatatagactcctacccacttggtaccaacgctatagttgctgtt
atttcatatactggttatgacatggaagatgccatggtgatcaataaaggatcgtttcag
cgaggatttggtcatgcaactgtgtacaaaacagaggttataaacctggcagaaatagca
aaaactacaccgcttatattctctgcttcagttacaagcaagtcatacctgaatggggaa
gttgatattgatggtctaccttatataggaaggtgtatcatgcctaacacagtgtactac
agttatgtgaatacacaaagtggtgaggagtctgtaagattatacaagaaccaggaacca
gcctatgtagaacacatcaagttgctaggaaatgatactggaaccagtggcaaatcaaaa
gttgccattatgcttagaatcaatagaaatccaattattggagacaagtttgctagtagg
catggtcagaaaggtgtatgcagtatgatgtaccccgtagaaaacctgccattcactgag
agtggaatgactccagatattatcttcaatccccatggctacccttctagaatgaccatt
gggatgatgatagagagtatggcaggcaaatctgcagcatcatacggacattgttatgat
gctacaccattccagttctcagaggatgaccctgccattgaccactttggaaacatgtta
gttaaagctggctataactaccatggtacagagagattttacagtggaatagatggcagg
gagttagaggccagtatcttcatgggtgtggtgtactaccagaggcttagacatatggtg
tcagataaatttcaggtaagaacaacaggacctgtagatcaagtcacataccagccagta
aagggacgaaagagaggtggtggtgtaagatttggggaaatggaacgagatgccttgatc
tctcatggaacatcattcctgcttcaagacaggcttctcaactgctcagataagtctatg
gctccagtttgcacagagtgtagaagtcttctgtctgtgtacatggagaaaagagcccca
gcaacagcagcagcatcgtttgagaaacagagacagtggtcatgtttacattgtaactct
ggacgtcatatagagattgtttcagtaccttacgtgttcagatacttagtagcggagctt
gctgccatgaatattagactggaattggatgtacagggctga
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