Mercenaria mercenaria (northern quahog): 123552411
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Entry
123552411 CDS
T07835
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1-like isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
123552411
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mmer04040
]
123552411
Ion channels [BR:
mmer04040
]
Ligand-gated channels
Glutamate (ionotropic)
123552411
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
CaM_bdg_C0
Peripla_BP_6
Ion_trans_2
Bromodomain
Motif
Other DBs
NCBI-GeneID:
123552411
NCBI-ProteinID:
XP_045198000
EnsemblRapid:
LOC123552411
LinkDB
All DBs
Position
4:complement(90422706..90493468)
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AA seq
944 aa
AA seq
DB search
MFIGQCVFILFALSGCLGENIHIGAVLSSPENQLLLKDYADKATARKTSKDFGLTFNATS
LLMDSNPVRSALSICDNLITKKVQVIIASHPAASAQSPISVSYTCGYYGIPLIGIYARDS
AFSDKNVHSTFMRTVPPYFHQAYVWIDLLVHYDWKQVIFIHSMDEEGRSILSKFQALAEE
QEIKIEKSVKFSVGLVNFTDLLLDLPQAQSRVILLSAGKEDAEHLYHDASELELTTDSDF
VWLVSEEAMSAYNVPVGVIGLQLINGTNEAAHLEDSVSLIANTVTDLFLGGNLSLSETPE
NCSRRMDSKWEQGINLLEHIKKQDVDGQTGRLSFNEEGDRLNPIYWIKNVQPEGTFVVGY
HGNKQGTEDKKLSFGNTAILWPSQDTKKPKGIKISTHLKVVTIESKPFVYKALWLNEEEC
YKKEGIQCSHTNSSTGETTTHCCYGYCMEMLHMLAARVNFTFDLHLSTDDSFGSFKRVNN
GTKKEWTGMVGELVNEQSDLVVAPLTINPERAQAIDFSKPFKYQGLTILVKKEQKDSSLA
SFLQPFQDTLWILVGLSVHVVALVLYLLDRFSPFGRFKLAKNDDTEEDALNLSSAMWFAW
GVLLNSGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFLVLDRPDASISGIDDSR
LRNPNENFRYATVKDSAVEMYFKRQVELSTMYRKMEEYNYNNADDAINDVKEGVKLQAFI
WDSSRLEYEDANDCDLVVAGELFGRSGLGVGLRKGSPWTHPISLSILELHEGGQMEKLDN
KWILIESTECPERDHTPATLGLTNMAGVFMMVAGGIVAGVFLIFVEILYKRHRGLKEKEL
ELARNAADRWRGNIAKRKTLRQTMQNQRETLNRVNSVAKTGAIDNNSTLNAGIHRSSLRQ
PGSSNSPPIIKPKVTIQSGRGVAPSPSIMLTNPAFSSSNRSDFV
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgtttataggccaatgtgtgttcatattatttgcgttgtcaggatgtttgggtgagaat
attcacatcggagcagtattaagtagcccagaaaatcagcttctcctgaaggactacgca
gacaaggccacagctagaaaaacaagcaaagattttggcctaacattcaatgccacgtcc
cttcttatggacagtaatcctgtaagatctgcattatcaatttgtgataatttgataacg
aaaaaggtgcaggttataatcgctagtcatccagcagcgagtgctcagtctccaatatca
gtgtcatatacatgcggttactatgggataccattgataggcatctatgcaagggatagc
gccttttcggacaagaatgtacactcaacatttatgaggacagtccccccatacttccat
caagcgtatgtatggattgatctacttgtccactatgattggaagcaagttatatttata
cacagtatggatgaggaaggacggtctattctcagcaagtttcaggccctggctgaagaa
caagagatcaagattgagaagagtgtgaaattttccgtaggactcgtcaactttacggac
ttattattagacctgccacaagctcagtctcgggtgatacttctctctgctggaaaagaa
gatgctgagcatttatatcatgatgccagtgaacttgagttgacaactgattctgatttt
gtttggctggtatctgaagaagccatgtcggcatacaatgtacctgtgggtgtaataggc
ctacagttgataaacggcaccaatgaagcagctcatctagaggatagtgtcagtttgata
gccaacacagtgacagatcttttcttgggaggtaacttaagcctgtcagaaacaccagaa
aactgttccaggcgaatggacagtaaatgggaacaggggattaatcttttagagcacatc
aagaaacaggatgtagatgggcagactggtcgtctcagctttaatgaagaaggggacagg
ctgaatcccatttactggatcaaaaatgttcaacctgaaggcacttttgttgtgggttac
catggaaacaaacaaggcacagaggataaaaagctgtcttttggcaacacagccattctg
tggccatcccaagatacaaagaaacctaaaggaataaagatttctacacatttaaaggtt
gtgactatagagtcaaagccatttgtttataaggccctttggttgaatgaggaggagtgt
tataaaaaggaagggatacagtgttctcatactaactctagcacaggagagacaactacg
cattgttgctatggttactgtatggagatgctgcacatgttggcagcaagagttaacttc
acatttgatcttcaccttagtacagatgattcgtttggatcttttaaaagggttaataat
gggacaaagaaagaatggactggaatggttggtgaactggttaatgaacagtctgatctt
gttgtggccccattaactattaacccagagagagcccaggctatagatttctcaaaacca
tttaaataccaaggtctaacaatccttgtgaaaaaggaacaaaaagattctagcctagca
tccttcttgcaaccattccaagatacgctgtggattcttgttggtttgtccgtgcatgta
gtggctcttgtgctatacctgcttgaccggttcagtcctttcggtcgattcaagcttgcc
aagaacgatgacacagaggaagatgccttgaatctatccagtgcaatgtggtttgcctgg
ggagtgcttctcaatagtggtataggagaaggaacccccaggagtttcagtgcacgtgtt
cttggaatggtttgggctggatttgctatgattattgtggcttcttacactgccaacttg
gctgccttcctcgtgcttgaccgaccagatgcttccatttctggtattgatgactccagg
cttcgtaacccgaatgagaatttccgatatgctacagtgaaggacagtgctgttgaaatg
tactttaagcgacaggttgaactgtctacaatgtatcgtaaaatggaggaatacaattat
aacaatgccgatgatgcaataaatgatgtcaaagaaggagtcaaattacaagcttttatc
tgggattcgtctcgtctggagtatgaagatgctaatgactgtgaccttgtggtggctggg
gaattgtttgggaggtctggacttggggttggactgaggaagggaagcccatggacacac
ccaatttcattgtcaatcttggaactgcatgagggagggcaaatggagaaattagacaat
aaatggatattgattgaaagtacagaatgtcctgaaagagatcataccccagctacatta
ggactgacgaacatggctggtgtctttatgatggttgctggaggcattgttgcaggggtg
tttctcatttttgttgagatcctctacaaaagacacagaggtttgaaagaaaaggaactg
gaactagccagaaatgctgctgacagatggagaggaaatattgctaaacgcaaaacatta
cgacagacgatgcaaaatcaacgcgagaccctgaaccgagtgaattcagtggcaaagaca
ggagcaatagacaataacagcacactgaatgctgggatacatagatctagtctgagacag
cctggttctagtaactcgccacctatcatcaagccgaaggtgaccatacagagtggacgt
ggtgtggcgccgtctcccagtataatgctaacaaacccggcattctcctcatccaacagg
tcggattttgtataa
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