Mercenaria mercenaria (northern quahog): 123553036
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Entry
123553036 CDS
T07835
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4-like
KO
K10798
poly [ADP-ribose] polymerase 2/3/4 [EC:
2.4.2.30
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
123553036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmer03032
]
123553036
03036 Chromosome and associated proteins [BR:
mmer03036
]
123553036
03400 DNA repair and recombination proteins [BR:
mmer03400
]
123553036
Enzymes [BR:
mmer01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
123553036
DNA replication proteins [BR:
mmer03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
123553036
Chromosome and associated proteins [BR:
mmer03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
123553036
DNA repair and recombination proteins [BR:
mmer03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
123553036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
VIT
ubiquitin
VWA_3
Rad60-SLD
VIT_2
BRCT
VWA
PTCB-BRCT
BRCT_2
VWA_2
PARP_reg
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
123553036
NCBI-ProteinID:
XP_053398285
EnsemblRapid:
LOC123553036
LinkDB
All DBs
Position
4:complement(83417443..83518502)
Genome browser
AA seq
1778 aa
AA seq
DB search
MALFEGCQIVLDLTTAVKFKEKTAIRKDITSNGGIVSFIVTKKSTHVVCDDSKKAEFSYK
CKMAAKYGFPVVSVDWIKMSIEAGHQLSTDDYLMAGKSKSEGLKEGKISASRFQKKDKKK
SIKPFINISSFKMWKQDDKNCPTFTKDFQIAKFALFKGEKTEKKVRKTFAVLEVHVDETF
SAGNSGTSHKYRVTSHSGTLNTVEKGAPGTTEFRFCNTVDETLAVFSHLYREQQQLGMTL
THDLFSRHIGSEKFKQMMGELGLECGSMTEDVGCLVEHIWLEANEEVETILSSNVTSIKE
EQINKAEAILKQIKSALDSGDSSKIFKLMNEFYIALPHRHQYRVMVPTKYWLSRKQDICQ
LVKDMISVSEATDFSLRASTPAKYRALRCGIDSLSTTSTEFHTVKQLIEESLTGDCTIKI
QAVFAVNRPVESTNFTCDIPNKQLLFHASKANNIVGILSRGLLMPRVVVDDHGGTRSDPG
MLGSGIYFASAASTSVGYSSPSQKKGTRFMLVSEVALGNCKTMYQKDLTLTCAPEGYHSI
HGVKTSEEFPSAFKNDEYVVYSPDQQRLKYLVEFTTDTDVIKETFEEYVNTEEISELDDE
DANEISLKDVKDIVDPMSKVKAGLVCNDDVPVNLKSVHVRAKLMDLASEVIVLQEYENNS
KNPLEAKYVFPLGDLAAVCGFEAFINGKHIVGEVKEKEQAHKEYKKAISEGHGAYLMDQD
EETPDVFTVSVGNLPPGATVLIKITYVAELQVEGEMVSFRLPGSVAPWKKDSLKETTQHE
TETVEVTQGETSVQVSIEMPFDIRSIECPSQKIKVKRTLTKATVEMMEGESIADGFQLLI
GLAEIHVPRMWVERKPDDQNHQACMLTFYPEFEACESDDVSVILLLDLSNSMKGDAIISA
KKVLLLTLQHLPPTWNFNVVVFGTAWKELFPSCVVKTAGNMRLASEFVMSLSATMGNTEV
VRPLHTFYLMKPESSMQNVLLISDGHMNNSELLLSSVRKNCQHTRIFTVGVSGTADRHLL
RALARVGAGSFEYFDTKVKSKWEMKVKSQINKAAQPGLTSVNVDWEQHGADVPSPVQAPR
QITALFNGSRSVIYGYVPNCTMATLRASIAGEEVSTMVSTSDLSITDGNILHRLTARAII
SDWEDGVLSADRTDHEIVKMNTKDYIIELSKQYTIVTQFTSFVAIEKRDKDEEKKAIDAP
SMSELVERENVDQLQYMGFEEEKKPEVDYEKAIDDVLTNVRLNFDSSDKQIDFLKEGIRL
AQEITDNELQTEKMLMLEEAFDSWDLDDKVDFSQAFGTQRIGNPKTQKTSHLFVKTLTGK
TVSMDLDACSTIADVKALIQDKEGIPPDQQRLIFAGKQLEDGRSLQDYNIQHESMLHLVL
RLRGGPGDEPVLKRRIARSAVAEKKEEQSDMLASLRCMAVDMGEELEKQNELLDSINTKS
HSKSLAFNEEEADYEEEAELCFEAETAMKDEYESDDNWDEDSESTESECESLSPFYLQSS
SAVEYLKSDDSSPRKVSEDHVKMKTLEKVSSADKVMKAADSESEESEEEMGFSLFEYDAG
VRYMYNRYSSTGQSTETTRNGVVGPVTKAKTAVRDEDRDKGSPPTMVKFSAVPKAKFRKA
AEFGAPDISSYLKSSSSAMRADGARADEPYGMTEFYAETYEPEDLLEEDVCADTAFYAQG
CEDVCLYEDVYADTDISEAISMDMAKMDDHAELEAELDELTAEEKEGMTVKDSAKMPAAD
GRAIKEPQVALQEAGVSRFSDMRMDGEEAKLRLRKVSD
NT seq
5337 nt
NT seq
+upstream
nt +downstream
nt
atggcattgtttgaaggctgtcagattgttctagatttgaccacagctgtcaagtttaaa
gaaaaaacagctataagaaaggatataacatcaaatggaggcatcgtttctttcattgtt
actaaaaagagtacacatgttgtgtgtgatgatagcaagaaggcagaattctcatataaa
tgtaaaatggcggccaagtacggttttccggttgtgtctgtagactggatcaagatgagt
attgaagccgggcaccagctcagtacagatgactatttgatggcgggaaaatctaaatct
gagggactcaaggaaggaaagatatcagcctccagatttcagaaaaaggacaaaaagaaa
agtatcaaaccctttattaacataagcagcttcaagatgtggaaacaagatgacaaaaac
tgtcctactttcaccaaggatttccaaattgcaaaatttgccctctttaaaggggagaag
acagaaaagaaggtacgaaaaacatttgctgttctagaagtccatgttgatgaaacattc
agtgcaggtaactctggcacgagccataaatacagagttacctcccattctggtacactg
aacactgtggaaaaaggggcaccgggcacaacagaattcaggttctgtaacacagtagat
gagactttggcagtattcagtcatttatacagagaacagcagcaacttggtatgaccttg
acccatgaccttttctccaggcatattggatcagaaaaatttaaacagatgatgggggag
ctaggtttggagtgtggcagtatgacagaagatgttggatgtctggtagaacatatatgg
ctagaagctaacgaggaagtggaaacaattctctccagtaatgtcaccagtatcaaggaa
gaacagattaataaagctgaagccattttgaagcagatcaagtctgccctagacagcggg
gatagcagtaagatttttaagctgatgaatgagttctatattgcactcccccacaggcat
cagtatagagtgatggtacctactaaatactggttgtcaaggaaacaagatatctgtcag
ctggtgaaggacatgatatcagttagtgaagccacagacttctccctgcgagcaagtaca
ccagctaaatatagagctctaagatgtgggattgacagtttaagtacaacaagtactgaa
ttccatactgtcaaacagctgatagaggagtcactaactggagactgtactataaaaatt
caggcagtatttgctgtgaatcgtccagtggagagcaccaatttcacatgtgatattccc
aataaacaacttctcttccatgcttccaaggccaataatatcgtaggaatcttgtcaaga
ggattattaatgcctagagttgtggttgacgaccatggaggtacaaggtctgatccaggc
atgcttggttcaggaatttacttcgcaagtgcagccagtactagtgtgggctattcctct
ccaagtcaaaagaagggtacaagattcatgctagttagtgaggttgcccttggcaactgc
aaaactatgtatcaaaaggatttgaccttgacctgtgcacctgaaggttaccacagtatt
catggtgtgaaaacatctgaagaatttccgtctgctttcaagaatgatgagtatgttgtg
tacagtccggatcaacagagactgaaatatctggtggagtttacaaccgatactgatgtg
attaaagagacttttgaagaatatgtaaatacagaggaaatatcagagttagatgatgaa
gatgctaatgaaatcagtctgaaagatgtcaaggacattgttgaccctatgtcaaaggtc
aaggctggtcttgtttgtaatgatgatgtgcctgtgaatcttaaatctgtacatgtcaga
gcaaaattgatggaccttgcatctgaggtgatagttcttcaagagtatgagaacaacagt
aagaatccactggaggcaaaatatgtcttcccgctgggggaccttgctgctgtgtgtggg
tttgaagcatttatcaatggtaaacatattgttggtgaggtgaaagagaaggaacaagct
cacaaagaatataagaaagcaatcagtgaaggtcatggtgcctacctcatggaccaagat
gaagaaacacctgatgtgtttactgtaagtgttggcaatcttccaccaggagctacggtc
ttgatcaagatcacatatgtggcagaattacaggtagaaggggagatggttagtttcaga
ttgccaggaagtgtcgctccatggaagaaagattctttaaaggaaactacacagcatgaa
actgagacagtggaggtcacacaaggggagacaagtgtgcaggtttcaatagagatgccc
tttgacatcaggtcaattgaatgcccctcacagaagatcaaagtcaagaggacattaaca
aaagccactgtagagatgatggaaggggagtctattgccgatgggttccagcttctgatt
ggtctagcagaaatacacgtgcctagaatgtgggtcgagagaaaaccagatgaccaaaat
caccaggcatgtatgctgacattttacccggaatttgaggcctgtgagtcggatgatgtc
agtgtgattttacttctggacctgtcaaactctatgaagggtgatgccatcatcagtgcc
aagaaagtcttgctgctgactctccagcatttaccccctacatggaactttaatgttgtt
gtgtttggaacagcatggaaagaattgtttccatcttgtgttgtgaaaacagcaggaaat
atgagactagcatcagagtttgtcatgagtctttcagcaactatgggtaacacagaggtt
gtgcgaccattgcatactttttacctcatgaaaccggagagctccatgcagaatgtcctc
ttgatctctgacggacacatgaacaactcggaactgttgctgagcagtgtcaggaaaaat
tgccaacataccaggatattcacagttggagttagtggcactgcagacagacatttacta
agagcgttggctagagttggtgcaggatccttcgagtactttgataccaaagttaaatct
aaatgggaaatgaaggttaaatctcaaatcaacaaggctgcccaaccaggactgacatct
gtaaatgttgactgggaacagcacggagcagacgtaccatctcctgtacaagctcctcga
caaatcacggcactcttcaatggttccagatcagttatatatggatatgtaccaaactgt
acaatggcaacattgcgagcaagcatagccggggaagaagtttctacaatggtgtctact
tcagatctcagcattacagatggaaatattcttcatcgtttaacagcaagagcaataatc
agtgactgggaggatggagttctctctgctgaccgtactgaccatgagatagtgaagatg
aacaccaaggactatattatagagctgagtaaacagtatactatagtaacacagttcacc
agctttgttgctatagagaaaagagataaggatgaggagaaaaaggctatagatgcaccc
tctatgtcagaactggtggaacgagaaaatgtcgaccagcttcagtatatgggctttgaa
gaggagaagaagccagaggttgattatgagaaggcaatcgatgatgtacttactaatgta
aggctgaactttgactcctctgataaacaaattgacttcctgaaggaaggaatcagactg
gctcaagagatcacagataatgagttacagactgagaaaatgttgatgcttgaagaagca
tttgacagctgggacctggatgataaagttgacttcagtcaggcatttggaactcaaaga
atagggaatccaaaaacgcagaagacttctcacttatttgtcaaaacattgacggggaag
acagttagtatggatttggatgcctgcagtactatagctgatgtaaaggcactgattcaa
gacaaagaaggaataccaccagatcaacagagattgatatttgctggaaagcagttagaa
gatggtagatcactgcaggactataacatccagcatgagtcaatgttgcatcttgtgtta
agactgaggggaggtcctggagatgaacctgtattaaagagaaggatagccagatcagct
gtagcagaaaaaaaggaggaacaatctgatatgcttgcttcccttagatgtatggcagtg
gatatgggagaagaacttgaaaaacaaaatgagctgttagatagtattaatactaagtcg
cacagtaaaagtttggcctttaatgaagaggaggctgattatgaagaggaggctgaattg
tgttttgaagcagagaccgcaatgaaagatgagtatgagtctgatgacaattgggatgaa
gattcagaatcaacggaatccgaatgtgaatcactatctccattttatttacaatcatca
tcagcagtagaatatcttaaatcagatgattcaagtcctagaaaagtgtcagaagatcat
gtgaaaatgaaaactttggagaaagtttcttcagctgataaggttatgaaagcagcagat
agtgagagtgaagaatcagaggaagaaatgggatttagcctgtttgaatatgatgctggt
gtcagatacatgtataaccgatattctagcactggtcagtctactgaaacaacaagaaat
ggagttgttgggccagtgacaaaagctaaaactgctgtacgagatgaagatagagacaag
ggaagtcctcctactatggttaaatttagcgcagtgccaaaagctaaattcaggaaggca
gctgaattcggtgctccagatatttccagctatttgaaaagtagtagttctgctatgcgt
gcagatggagcaagggcagatgaaccttacggtatgactgagttttatgcagaaacctat
gaacctgaagatttattagaagaagatgtgtgtgcagacacagccttttatgcacaaggc
tgtgaagatgtatgtttatatgaagatgtgtatgcagacacagacatttcagaggcaata
agtatggacatggcaaagatggatgaccatgctgaacttgaagctgaattagatgaactt
acagcagaagagaaagaaggaatgacagtgaaagactcagctaaaatgccagcagcagat
ggaagagcaattaaagaaccacaagtggctttacaagaagctggagtttccagatttagt
gacatgagaatggatggagaagaggcaaagttacgtttgagaaaggtatctgattaa
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integrated database retrieval system
