Mercenaria mercenaria (northern quahog): 123557208
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Entry
123557208 CDS
T07835
Name
(RefSeq) beta-galactosidase-like isoform X1
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer00052
Galactose metabolism
mmer00511
Other glycan degradation
mmer00531
Glycosaminoglycan degradation
mmer00600
Sphingolipid metabolism
mmer00604
Glycosphingolipid biosynthesis - ganglio series
mmer01100
Metabolic pathways
mmer04142
Lysosome
Module
mmer_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
123557208
09103 Lipid metabolism
00600 Sphingolipid metabolism
123557208
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
123557208
00604 Glycosphingolipid biosynthesis - ganglio series
123557208
00511 Other glycan degradation
123557208
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
123557208
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmer04147
]
123557208
Enzymes [BR:
mmer01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
123557208
Exosome [BR:
mmer04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
123557208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
123557208
NCBI-ProteinID:
XP_053399524
EnsemblRapid:
LOC123557208
LinkDB
All DBs
Position
5:complement(52010015..52035297)
Genome browser
AA seq
703 aa
AA seq
DB search
MAATQTSKSMNLAVLLLIVGLSGCCGVIFHAEIKTPTFGIDYDNNTFVMDGKPFRYISGS
IHYSRVPYQYWDDRLHKMAAAGLNAIQTYIPWNIHETVQGQYDFEGQQDIVTFFKTAQKY
NLAVILRPGPYICAEWEFGGLPAWLLKDPSIKVRTTDPVYLKAVMKWMEKLYSVISPLLY
KNGGPIITVQIENEYGSYPACDYTYLEVLRDLAWKYLGTDVVLFSTDGDGDGYLKCGTIN
GVYATVDFGITYHPEKNFAIQRHKEPEGPLVNSEYYTGWLDHWGQNHSTVPTAAVAKSLD
LMLALGANVNMYMFEGGTNFGFWNGAEFPPFKAIPTSYDYDAPLSEAGDITEKYNSVRDI
VLKYNPGARMKIPPSTPKYAYGKVQMIFVETVVSYVDGTSKPLSSKYPVNMESMDHYYGF
VLYAHELKETVTDARIDLSGARDRAYVMTMSGNTLSSVGVVERDSGNATLTFSARADDSL
FILVENQGRINYGGQMNNNLKGLISNVTLNGDNLTDWLNYPVNVESDIINKQIVKSSSSR
MPALEYSIPSVYSGQLKIMDEPMDTYLDMSLWTKGQIFVNGLNLGRYWPHKGPQVRLYVP
KYALKKGTNNIALIELEESPCQNKEQCYISFYDKPLINATVSPDVSHGLVPNNMDRMFYR
GNLTFSEKYTGKVGSGRRQLSFFETVYDFVMKIVETKWGILFL
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcagctacgcagacttcaaaatcgatgaatttggctgtattactcttgattgtggga
ttgtcaggctgttgtggggtaatattccatgcagagattaagacccctacatttggtatt
gactacgacaacaacacatttgtgatggatggtaaacctttccgctatatatctggaagt
atccattattcaagagttccataccagtactgggacgacaggcttcacaagatggctgct
gctgggctaaatgctatacagacctatataccctggaacatacatgagacagtacaaggt
caatatgactttgagggacagcaagatattgtgacatttttcaagacagcacagaagtac
aaccttgcagtgatattgaggccagggccttatatatgtgcagagtgggaatttggagga
cttcctgcatggctattgaaggatccaagtataaaagttaggaccacagacccagtttat
ttgaaagcagttatgaagtggatggaaaagttatactcagttatctcccctttgttgtac
aagaatggaggcccaatcataactgtacagatagagaatgagtatgggagctacccagct
tgtgactatacctatctggaagtgttacgtgaccttgcttggaagtacctgggtacagat
gtggttcttttctccacagatggggatggcgatggatatcttaaatgtggtactatcaat
ggagtttatgctacagtagattttggaattacctatcatccagagaaaaattttgcaatt
cagagacataaagaaccagaaggcccattggtaaattctgaatattatacaggatggttg
gaccactggggacagaatcactccacagtgccaaccgcagctgtggccaagagtcttgat
ctaatgcttgcactcggtgctaatgtcaatatgtatatgtttgaaggtggaacaaacttt
ggtttctggaatggagcagagttccctccctttaaggccatccctacaagttatgattac
gatgccccgttatctgaagcaggggacataactgaaaagtacaactctgtcagagatatt
gttctcaagtacaatccaggggcaagaatgaagattcccccatctactccaaagtatgct
tatgggaaagttcagatgatatttgttgaaacggtggtttcatatgtggatgggacatcc
aaaccattgagttctaaatatcctgtaaacatggaatctatggatcactattatggcttt
gtactgtatgcacatgaactgaaagagacagtaactgatgctagaatagatctgtcagga
gccagagacagggcttacgtcatgaccatgtctggaaataccttgagttcagttggagtc
gtggagagggacagtgggaatgcaaccttgaccttcagtgctagagcagacgacagtttg
tttatactggtagagaaccaaggtcgtattaattatggaggacaaatgaacaacaatcta
aagggtttaatttcaaatgttactttgaatggggataatttgacagactggctaaactac
ccagtgaatgttgaaagtgacatcataaataaacagattgtgaagtcatcatcttcaaga
atgccagctttagaatatagcataccttcagtgtactcgggacaactgaagataatggat
gagccaatggacacatatttagacatgtctttatggacaaagggtcagatatttgtgaat
ggtttgaatctcggaagatactggccacataaagggccacaagtccgactgtatgttccc
aaatacgctttgaagaagggtaccaataacatcgcattaatagagctggaggaatccccg
tgccagaacaaagaacagtgctatatttcattttatgataaacccttgataaatgcaact
gtaagccccgatgtcagtcatggactggtaccaaataacatggacaggatgttttataga
ggaaatttaactttttctgaaaaatatacaggaaaggttggatcaggaagaagacagctg
tctttctttgaaacagtttatgactttgtaatgaaaattgttgaaaccaaatggggaatc
ttgtttctgtga
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