Methanohalophilus mahii: Mmah_0531
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Entry
Mmah_0531 CDS
T01211
Name
(GenBank) DNA-directed RNA polymerase, subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
mmh
Methanohalophilus mahii
Pathway
mmh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mmh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Mmah_0531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmh03021
]
Mmah_0531
Enzymes [BR:
mmh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Mmah_0531
Transcription machinery [BR:
mmh03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Mmah_0531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
ADE36058
UniProt:
D5EA57
LinkDB
All DBs
Position
550421..553081
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AA seq
886 aa
AA seq
DB search
MMVISMDNTIPSIPQRIGAIRFGLLSPREIRKMSVTSIITADTYDDDGYPIDMGLMDLRL
GVIDPGLKCKTCGGRAGECPGHFGHIELVAPVLHVGFNKIIRKILRSTCRNCSHLLLEDK
QKKAYINQFAKLDVMSHLPDDLINNVFKEARKTKICPYCGEEQLEIKFEKPSDYIENDYK
LTPTEIRDRLERIPDDDLKVMGMDPESARPEWMVLTVLAVPPVTVRPSITLESGQRSEDD
LTHKLVDIIRINQRFQENRDAGAPQLIIEDLWELLQYHLTTFFDNEVSGVPPARHRSGRP
LKTLTQRLKGKEGRFRGSLSGKRVNFSARTVVSPDPNLSINEVGVPYQIAKHMTIPVRVI
SRNLEMMRAYVARGGETHPGANYVFREDGRRLKITEANKEELSEKLEPGWTVERQMQDGD
IVLFNRQPSLHKMSIMAHKVKVLPNKTFKLNPAVCPPYNADFDGDEMNMHVLQTEESRAE
ANILMQVQENILSPRFGGPIIGGIHDHISGMFLLTRNENMISKNDALELLRKSEVRELPE
PAGYTDVGDPFWTGKQIFSQILPKDLNLEFKANVCFKCDVCKGRDCEYDAYVVVENGELV
TGTIDEKAIGAFKGKILDSIVKRYGTTEAAQFVDDMTRLAIRGVMRTGLSFGISDEDIPR
EAKLNIDEELERAENEVAELIQAYEAKELEPLPGRTLAETIELKIMQSLGKARDHTGTIA
GNHLGLENSAVIMAKSGARGSMLNLTQMAACVGQQAVRGERIRRGYEGRTLPHFDRGDLG
ADAHGFVKSSYKSGLNPTEYFFHSVGGREGLVDTAVRTSQSGYLQRRLVNALQDLEVQYD
RSVRETRGVIVQFKYGEDGIDSTKSDYSSEETVHNIVRSVTGKEVK
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgatatcaatggataatactattccctctattccccagagaattggtgcgatc
agattcggtctcctgtctccgcgggaaatccgtaagatgagtgttacttcaattattact
gctgatacatatgacgacgatggttatccaattgacatgggtttaatggatttgagactg
ggtgttatagacccgggtttgaagtgcaaaacctgtggaggtagggccggtgaatgtccg
ggtcacttcggtcatattgaactcgtggcaccggtactccacgtaggatttaataagata
ataagaaaaatacttcgatctacatgtcgtaactgcagccatcttcttcttgaggataaa
cagaaaaaagcctatattaatcagtttgccaaactggatgtaatgagtcatctgcctgat
gatctgattaataatgtattcaaggaagcacgaaagaccaaaatatgtccttattgtggg
gaagagcaacttgagataaaattcgaaaaaccctcagattacatagagaatgattacaag
ctgacaccgactgaaatccgtgatcgtcttgaacgtatcccggatgatgacctaaaggtc
atgggtatggacccggagtctgcaagacccgaatggatggttctgacagtgctagcagtt
cctcctgtaactgttcgtccttccattactctggaatcaggtcagcgtagtgaagatgat
ttaactcataaacttgtggatattattcgtattaatcagcgtttccaggaaaatcgtgat
gcgggtgcaccacaacttattatagaggatctctgggaacttttgcagtatcaccttact
acgttctttgataacgaagtttcaggtgtccctccggcaagacacaggtctggccgccct
ctaaagactcttacacagcgtcttaaaggaaaggaaggtcgtttcaggggaagtctttcc
ggtaaacgtgtgaatttctctgcacgtacggttgtatctccagatcccaaccttagtatc
aatgaagtgggtgttccctatcaaattgccaagcatatgacaattcctgtaagggtaatc
tccagaaatctggaaatgatgcgtgcatatgttgcaaggggtggagaaactcatccgggt
gctaattatgtattccgtgaagatgggcgccggcttaagatcaccgaagccaacaaggaa
gaactttctgaaaaacttgaacctggttggacagttgaaaggcagatgcaggatggagat
attgttctctttaacaggcagccttctcttcacaaaatgagcataatggcacataaggtc
aaggtattgccaaataagactttcaaacttaatccagctgtatgtcctccttacaatgcg
gactttgacggcgatgaaatgaacatgcatgttctgcaaacggaagaatcccgtgcagaa
gccaacattttaatgcaggttcaggagaatatcctttctccccgttttggaggtccaatt
attggtggtatccacgaccacatttcaggtatgttcctgctgacacgcaatgaaaatatg
atcagtaagaacgatgctctggaactattacgtaaatcagaagtgcgtgagcttccggag
cctgccggttatactgatgtgggggatcctttctggacgggcaaacagattttcagccag
attcttccaaaggatctcaatcttgaatttaaagccaatgtatgtttcaagtgtgatgtc
tgtaagggcagggactgtgaatatgatgcctatgtggtagttgaaaacggcgaactggtg
acagggacgatcgatgaaaaggcaatcggggcctttaagggcaaaatccttgattctatt
gtgaaaagatatggtacaacagaggctgctcagtttgtggacgatatgaccaggcttgcg
attcgtggtgtgatgcgtactggccttagttttggtatcagtgatgaggacattcctcgt
gaagcaaaactgaatatcgatgaggaacttgagcgtgctgaaaacgaagtcgcagaactc
attcaagcttatgaagcaaaagaacttgaacccctcccgggtagaactctcgctgaaacc
atcgagcttaagatcatgcagtctctgggtaaagcaagggaccataccggtacgattgca
ggaaaccatctgggtctggaaaattctgctgtgattatggcaaaatccggtgcacgtggt
tctatgttgaacctgacacagatggcagcctgtgtaggtcagcaggctgtacgtggtgaa
cgtatcaggagaggttatgaaggccgtaccctgccacactttgatagaggtgatcttggg
gctgatgcacatggttttgtaaagtccagctataagagcggtttaaatcctacggaatat
ttcttccattcagtaggaggcagggaaggtcttgttgatactgcggtgcgtacatcccag
tccggttatctgcagcgtcggcttgtaaatgcgttgcaggatcttgaagtacaatacgat
cgatcagtacgtgaaacacgtggtgtcatcgtacagttcaagtacggagaggatggtata
gattctaccaagagtgattatagtagtgaggaaacggtgcataacatagtgcgttcggtc
acaggtaaggaggtgaaataa
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