Methanosarcina mazei S-6: MSMAS_2425
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Entry
MSMAS_2425 CDS
T04532
Name
(GenBank) DNA-directed RNA polymerase subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
mmj
Methanosarcina mazei S-6
Pathway
mmj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mmj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSMAS_2425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmj03021
]
MSMAS_2425
Enzymes [BR:
mmj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSMAS_2425
Transcription machinery [BR:
mmj03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSMAS_2425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
CBP66
DUF1947
Motif
Other DBs
NCBI-ProteinID:
AKB65621
UniProt:
A0A0E3LUP3
LinkDB
All DBs
Position
3032626..3033849
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AA seq
407 aa
AA seq
DB search
MSISEATVDSMIKDLPLPSNILKTLRDDVIKAGVSKKEMEEIIERVMEEYTVSCIEPCDA
AGVVAAQSIGEPGTQMTMRTFHYAGVAEINVTLGLPRLIEIVDARKIPSTPMMTIALSKE
HPEDYAYDREKTRALAWEIEATKIDHIADVTTDLSQMKLIIDLHEKAMEGRNITIDRVKE
KFNEELNVLVSISPDIDNQIVITPGEPSYRELLQLAKSIHNVTLKGIEGIKRVVVRKEGE
EYTLYTEGSALREVLQFEGVDRTRTSTNNINEIYEVLGIEAARNAIIKEATDTLREQGLT
VDIRHIMLVADLMTSDGEVKQIGRHGISGEKASVFARAAFEVTVNHLLDAGMRGYVDQLQ
GVTENIIVGQPIRMGTGDVHLISRKAEKVVEVPPEIETAEEIEVEEG
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcagcgaagccacagtagacagcatgataaaggaccttccacttccttctaac
attttaaaaactctgagggacgatgttatcaaggcaggggtaagcaaaaaagaaatggaa
gagattatagaaagggtaatggaagaatatacggtctcgtgcattgagccctgtgacgct
gctggagttgttgcagcccagtcaataggagaaccgggcactcagatgacgatgcgtacc
ttccactacgccggtgtggctgagattaacgttaccctgggtcttcctcgtttgattgaa
atcgtggatgcaaggaagattccgagcactcctatgatgacaattgccctttccaaagaa
cacccggaagactatgcttacgacagggaaaagacaagagcccttgcatgggagattgaa
gcaaccaaaatagaccatatcgctgacgttaccactgacctttcccagatgaagcttata
atagacctgcacgaaaaagcaatggaaggcaggaatattacaatagaccgggtaaaggag
aagttcaatgaagagctcaatgtcctggtcagcatctctcctgatatagacaaccagatt
gttatcactcccggagagccttcttacagggaactgctccagcttgcaaagagcatccat
aatgttaccctcaaaggcatagaagggatcaaaagagtcgtggtccgaaaagagggcgaa
gaatataccctgtatacagaagggtcggctcttcgtgaagtcctgcagtttgaaggcgtg
gacaggaccagaaccagcacaaacaacattaacgaaatttacgaagtgttggggatcgag
gctgcaagaaacgcaatcatcaaggaggctacggataccctgcgtgaacagggtcttacc
gtggacatcaggcacatcatgcttgtggcagaccttatgacttcggacggggaagtaaaa
cagataggcaggcacggtatttcaggtgaaaaggcaagtgtatttgcccgtgcggctttc
gaagttactgtgaaccatcttctcgatgcaggtatgcgcggatacgtggaccagctgcag
ggtgttacggaaaacatcattgtcggccagccgatccgcatgggtacgggagacgtacac
cttataagcagaaaagcagagaaagtggtggaagtaccaccggaaatcgaaacagcagaa
gaaattgaagtcgaagaggggtga
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