Methanosarcina mazei S-6: MSMAS_2526
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Entry
MSMAS_2526 CDS
T04532
Name
(GenBank) DNA-directed RNA polymerase subunit D
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
mmj
Methanosarcina mazei S-6
Pathway
mmj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mmj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSMAS_2526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmj03021
]
MSMAS_2526
Enzymes [BR:
mmj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSMAS_2526
Transcription machinery [BR:
mmj03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MSMAS_2526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Fer4_7
Fer4_9
Fer4
Fer4_8
Fer4_6
Fer4_16
Fer4_21
Fer4_10
DUF4879
Fer4_17
Motif
Other DBs
NCBI-ProteinID:
AKB65722
UniProt:
A0A0E3RHE5
LinkDB
All DBs
Position
complement(3162859..3163590)
Genome browser
AA seq
243 aa
AA seq
DB search
MAFANGVRRAMIADVPTLAIEYVNLYDNTSVLYDEQLALRLSLIPLVTDIETYMPQAECE
VCGGEGCPACEVSLTLSAEGPGTVYSRDLISSDPKIQPADPNIPIVELKKGQKLVLEAIA
HMGYGRDSVKWQAGVACGYKNVPVITIENCDACGHCAAECPKGIIRVEEAGARIAEDDLI
KCSLCRLCEQVCDINAIKVDFYENAFVFTMESDGSYTAKDLTINAANVIKGKAEELLAIL
DQL
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgctaacggcgtacggcgtgccatgatcgccgatgtacccactcttgcaatc
gagtatgtaaacctttacgacaatacctccgtgctctatgatgaacagctggctctccgt
ctctccttaatcccgcttgtaacggatatagagacgtatatgcctcaggctgagtgtgag
gtctgcggaggagaaggctgccctgcctgcgaggtctccttaaccctcagtgcagaaggt
cctggtaccgtttattcgcgtgaccttatctcttctgatcccaagatccagccggcagat
cctaatatcccgattgttgagctgaaaaagggacagaagctcgtgctcgaggctattgcc
catatgggctacggcagagacagcgtaaaatggcaggcaggcgttgcctgtggctacaag
aacgtacctgttataaccattgagaactgcgatgcctgcggacactgtgcggcagaatgc
cctaaaggcattatccgggttgaagaagcaggagcaaggattgctgaggacgaccttata
aaatgttccctctgcaggctctgtgaacaggtatgtgacattaacgctataaaagtggac
ttctacgaaaacgcttttgtttttaccatggagtccgatggttcatatactgctaaagac
cttaccattaatgccgcaaacgtcattaaaggtaaagccgaggaacttctggcaattctg
gaccagctctga
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