Marmota marmota marmota (Alpine marmot): 107147450
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Entry
107147450 CDS
T09644
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor E3-like
KO
K09105
transcription factor E3
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04137
Mitophagy - animal
mmma05202
Transcriptional misregulation in cancer
mmma05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
107147450
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
107147450
09162 Cancer: specific types
05211 Renal cell carcinoma
107147450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmma03000
]
107147450
Transcription factors [BR:
mmma03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
107147450
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
DUF3371
HLH
Motif
Other DBs
NCBI-GeneID:
107147450
NCBI-ProteinID:
XP_048666082
LinkDB
All DBs
Position
Unknown
AA seq
569 aa
AA seq
DB search
MSPAAEPARGGVEANEEGPRAVFMQLEERRPADWAQLLSLNSLLPESGIVAGVELEKILD
ADSFYELKSQPLPLRXQATPTTPATLSTSSSAGGSRTPAMSSSSSYRALLRQQLTRAEAQ
EQERSEHPEXAAAASFPSPAPTSPAISVVGVSARGHTLGCPLPAQVPREVLKVQTPLENP
TRYHLQQARRQQVKQYLSTSLGPKLASQALTPPPGLTSAQRLPAPEAAHATGPTGSAPNS
PMALLTIGSSSENEIDDDIDEIISLESSSSDEMLSYLPGGTAGLQLPSSLTASGNLLDLY
SNQGVATPAITVSNSCPAELPHIKPEISETEAKALLKEHQKKDNHNLIERGRRFNIDFRI
KELGTLIPKSNDPEMGWNKGTILEASVDYIHKLQKEQQRSKDLESXHRSLEQANRILQLR
IQELEVQAQIHGLPVPPTPGLLSLTTTSASDSLKPEQLDIEEEGRSGTAAFHVAGGPAQN
APHQQPPEPPSDALLDLHFPSDHMGDLGDPFHLELEDILMEEEEEVVGGLSGGALSPLQA
ASDPLLSSVSPAVSKASSQGSSFSMEEES
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctgctgccgagccagctcggggaggcgtagaggccaacgaggagggccctcga
gccgtgttcatgcagttggaggagcgcaggccggccgattgggcccagctgctcagcctg
aactctttgcttccggaatccgggattgttgctggcgttgaattagaaaagatccttgat
gctgacagcttctacgagctcaaaagccaacccctacccctacgcntccaggccacacca
accaccccagctacactgtctacatcgtcttctgcagggggctccaggacccctgccatg
tcgtcatcttcttcataccgggccctgctgcggcaacaactcacgcgggccgaggcacag
gagcaggagaggagtgagcatcccgaataggctgcagctgcttccttccccagtcctgca
cctacctctcccgccatctctgtggttggcgtctctgctcggggccatacgttgggctgt
ccactccctgctcaggtgcccagggaagtgctcaaggtacagacccccctggagaaccca
acgcgctaccacctgcagcaggcacgccggcagcaggtgaaacagtacctgtccacttca
cttgggcccaagctggcttcccaggccctcaccccaccaccagggctcaccagtgcccag
cggctgcctgctcctgaggctgctcacgccactggtcccacaggcagcgctcccaacagc
cccatggcactgctcaccatcgggtccagctcagagaacgagattgatgatgacattgat
gagatcatcagcctggagtccagttccagtgatgagatgctcagctacctgcccggaggc
acagcagggctgcagctccccagctctctgactgcgtcagggaatctgcttgacttgtac
agtaatcaaggtgtggccactccagccatcactgtcagcaactcctgtccagctgagctg
cctcacatcaaaccggagatctctgaaaccgaggcaaaggccctgttgaaggaacaccag
aagaaagacaatcacaacctgattgagcgaggcaggcgattcaacattgactttaggatc
aaggagttgggcaccctcattcccaagtccaatgacccagagatgggctggaacaagggc
accatcctggaggcctctgtggattatatccacaagttgcagaaggagcaacagcgctcc
aaagatctggaaagttgacatcggtccctggagcaagccaatcgcatcctgcagcttcga
attcaggagctagaagtgcaggcccagatccatggtttgccagtgccacccaccccaggg
ctgctctccctaaccacgacttcagcctctgacagcctcaagccagagcagctggacatt
gaggaggagggcaggtcaggcacagcagcatttcatgtagcagggggacctgcccagaat
gctccccatcagcagcccccagaaccaccttcagatgctcttctggacctgcattttccc
agtgaccacatgggggacctgggagaccccttccacctggagctggaggacattctgatg
gaggaggaggaggaggtggtgggaggactatcggggggtgccctgtccccactgcaggct
gcctctgaccccctgctttcttcagtatccccggctgtctcaaaggccagcagccagggc
agcagcttcagcatggaggaagagtcctga
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