Marmota marmota marmota (Alpine marmot): 107154159
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Entry
107154159 CDS
T09644
Symbol
Polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107154159 (Polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmma03021
]
107154159 (Polr1b)
Enzymes [BR:
mmma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107154159 (Polr1b)
Transcription machinery [BR:
mmma03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
107154159 (Polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
107154159
NCBI-ProteinID:
XP_015355251
Ensembl:
ENSMMMG00000002463
UniProt:
A0A8C5YNL1
LinkDB
All DBs
Position
Unknown
AA seq
1135 aa
AA seq
DB search
MDPGGRWRGLPSGPSLRHLTDPSYGVPPEQQKAALQELTRAHVESFNYAVREGLSHAVQD
IPSFDFAFKDERISLTIVDAVISPPTVPKGTICKELNVYPAECRGRRSTYRGKLTADISW
AVNGISKGIIKQFLGYVPIMVKSKLCNLYSLSPPALIEHHEEAEEMGGYFIINGIEKVIR
MLIMPRRNFPIAMVRPKWKSRGPGYTQFGVSMHCVKGEHSAVNMNLHYLENGTVMLNFIY
RKELFFLPLGFALKALVSFSDYQIFQELIKGKEDDSFFRNSVSQMLRIVMEEGCSTQKQV
LNYLGECFRVKLSLPDWYSNEQAAEFLFNQCICIHLKSSTEKFYVLCLMTRKLFALAKGE
CMEENPDSLVNQEVLTPGQLFLMFLKEKMEAWLVSIKIALDKKAQKTDVSINSENLMKIF
SMGTDLTRPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFIRYLSHFRCVHRGAAFAK
MRTTTVRRLLPESWGFLCPVHTPDGAPCGLMNHLTATCEVVTQLVYTTSLPTLLCSLGVT
PVDGAPHRPYSECYPVLLDGFMVGWVDKDLAPGIADSLRRFKVLREKRIPPWMEVVLVPM
TGKPSLYPGLLLFTTPCRLVRPVQNLELGQEELIGTMEQLFMNIAIFEDEVFAGVTTHQE
LFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTYQDRSDNKLYRLQTPQSP
LVRPCMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMILNKASWERGFAHGSVYKSEFID
LSERIKQGDDSLVFGVKPGDPRTLQKLDGDGLPFIGAALKYGDPYYGYLNLNTGESFVVF
YKSKENCIVDNIKVCSNDTGNGKFKCVCVTMRVPRNPTIGDKFASRHGQKGILSRLWPAE
DMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFTFSEENSALE
YFGEMLKAAGYNFYGTERLYSGISGVELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDK
VTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPL
LEKPPPSWSALRNRKYNCALCNRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDVV
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggatcccggcggccggtggcgtggcctgcccagcgggcctagcctgaggcatctcacc
gacccctcttacggggtccctcccgagcagcagaaggcggcgctgcaggagctgacgcgg
gcgcacgtggagtctttcaactacgccgtgcgcgaggggctcagccacgcggtgcaggat
ataccttcctttgactttgctttcaaagatgagcgtatctctcttactattgtggatgct
gtcatcagtccacccacagttccaaaagggaccatctgcaaagagctcaacgtttatcca
gctgaatgccggggccgaaggagtacctaccgtgggaagctgacagctgatatcagctgg
gcagtgaatggaatctcaaaaggaatcatcaagcagtttcttggctatgttcccatcatg
gtgaagtccaagctttgcaacttatacagcctttctcctccagccctcattgagcaccac
gaggaggcagaggaaatgggaggctattttataatcaacggcattgaaaaagtcatccga
atgttaattatgcctcggagaaatttccccattgcaatggtaagaccaaagtggaaaagc
agagggcctggctatactcagtttggagtttcaatgcactgtgtgaagggagaacattct
gcagtcaatatgaaccttcactacctggaaaatggcacagttatgttgaacttcatttac
cggaaagagctgttctttcttcctttgggatttgcacttaaggcacttgtcagcttttct
gattatcagatttttcaagagctcatcaaaggaaaagaggatgactctttctttaggaac
tctgtgtctcagatgttgaggatagtaatggaagagggttgttccacacagaaacaggtc
cttaactacctgggggaatgcttcagagtgaaactcagtcttcctgactggtactccaat
gaacaggcggcggagttcttgttcaaccagtgcatctgcatccacttgaaatccagtact
gaaaagttttatgtactttgtctcatgacccggaagctctttgctttagccaaaggagag
tgcatggaggagaatcctgatagtttggtgaatcaagaagtccttacacctggccagctg
tttcttatgtttttgaaggaaaaaatggaagcttggttagtgtctattaaaatagcttta
gataagaaggctcagaagactgatgtgtccataaactctgaaaatttgatgaagattttc
agtatgggaacagaccttacaagaccatttgaatatcttcttgctactgggaatctgcgt
tcaaaaacaggtcttggcttcctgcaagattctggactttgtgttgtggctgacaagctg
aacttcatacgctatctctcccatttccgctgtgtgcacagaggggctgcttttgccaag
atgaggaccaccactgtacgtaggctgctgccagagtcctggggcttcctttgccccgtg
cacaccccagatggggcgccgtgtggtctgatgaaccacctaactgccacgtgtgaggtc
gtcacgcagcttgtgtatacaacatctcttccaactctgctctgcagcttaggggtcact
cccgttgatggagcaccacatcgaccctacagtgagtgctaccctgtcctgctggatggc
ttcatggtgggctgggtggataaggatcttgctcctggcatcgcagattctctccgacga
tttaaggtgttaagagaaaaaagaatccccccctggatggaggtggtccttgtgcccatg
acaggaaagccaagtctgtacccaggactcttgctttttaccactccttgccgactggtg
cggcctgtgcagaacttggaactgggccaagaagaattgattggcacgatggaacagctc
ttcatgaacatcgctatctttgaggatgaggtttttgctggagtcaccacacaccaggaa
ctcttccctcacagcctgctcagtgtcatcgccaacttcatccccttctctgaccacaac
cagagtccacggaacatgtaccagtgccagatgggtaagcagactatgggctttcccctt
ctcacttaccaagaccgatcagataataaactgtaccgtcttcagactccacagagtcct
cttgtaagaccatgcatgtatgattattatgacatggataactacccaatagggacaaat
gccattgttgctgtgatttcatacactggctatgacatggaagatgccatgattctaaat
aaggcttcttgggagcgaggctttgctcatggaagtgtctacaagtcggagttcatagac
ctgtctgaaaggattaaacagggagatgatagtctggtgtttggggtcaaacctggtgac
ccccggactctacagaagttggatggcgatggactgcccttcataggggcagcactgaag
tatggagacccatattatggctacctcaacctcaacaccggggagagctttgtggtgttc
tataagagtaaagaaaattgcatcgtggataacatcaaagtttgcagcaatgacactggg
aatgggaaattcaagtgtgtttgcgtcacaatgcgcgtccctcggaacccaacaatcgga
gataagttcgccagtcgtcacgggcagaagggcattttgagccggttgtggccagctgag
gacatgccttttactgagagtgggatggtgccagacattctgttcaaccctcatggcttt
ccatcccgtatgaccatcggcatgttaattgaaagtatggctgggaaatctgccgctttg
catggcctctgccacgatgcgacacccttcactttttctgaggagaactctgctttggag
tacttcggtgagatgttaaaggctgcgggctacaacttctatggcactgagagattgtat
agtggcatcagtggggtagaactggaggcagacattttcataggcgtggtttattatcag
cgcttacgtcacatggtgtccgacaaatttcaagttagaacaactggagccagggacaaa
gtcaccaaccagcctattgggggaagaaacgtgcagggcggaatccgttttggggagatg
gagcgggatgctctcttggcccacggcacatcttttctcctccatgaccgcctcttcaac
tgctctgaccgctcggtggcccacgtgtgtgtcaagtgtggcagtttactttctccactg
ttggagaagccacccccttcctggtctgccttgcgcaacagaaaatacaactgtgctctc
tgtaaccgcagtgacaccattgatactgtctctgtgccttacgtctttcggtattttgta
gctgaactggcagctatgaacatcaaagtgaagctggacgtcgtgtaa
DBGET
integrated database retrieval system
