Marmota marmota marmota (Alpine marmot): 107157993
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Entry
107157993 CDS
T09644
Symbol
Polr2a
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03020
RNA polymerase
mmma03420
Nucleotide excision repair
mmma05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107157993 (Polr2a)
09124 Replication and repair
03420 Nucleotide excision repair
107157993 (Polr2a)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
107157993 (Polr2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmma03021
]
107157993 (Polr2a)
03400 DNA repair and recombination proteins [BR:
mmma03400
]
107157993 (Polr2a)
Enzymes [BR:
mmma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107157993 (Polr2a)
Transcription machinery [BR:
mmma03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
107157993 (Polr2a)
DNA repair and recombination proteins [BR:
mmma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
107157993 (Polr2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_3
RNA_pol_Rpb1_7
RNA_pol_Rpb1_R
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
107157993
NCBI-ProteinID:
XP_015359901
Ensembl:
ENSMMMG00000019616
UniProt:
A0A8C6A124
LinkDB
All DBs
Position
Unknown
AA seq
1970 aa
AA seq
DB search
MHGGGPPSGDSACPLRTIKRVQFGVLSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDP
RQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVD
SNNPKIKDILAKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLTKEKG
HGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMEP
RYARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAA
HVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVD
FSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYII
RDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWS
TFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQD
TLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHI
NCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEM
GHDITRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQDIQNTIKKAKQDVIEVIEKA
HNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKIN
ISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHA
MGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGES
VEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVKDVLSNAHIQNELEREFERMR
EDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELSKKL
VIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAI
AHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLT
VFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMP
DFDVARISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIR
IMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKI
IITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALER
ELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLM
EAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGLGAAGPTG
MFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPG
YSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSP
SYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP
TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS
YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT
SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY
SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS
PKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEEN
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggggtggtcccccctccggggacagcgcatgcccgctgcgcaccatcaagaga
gtgcagttcggagtcctgagtccggatgagctgaagcggatgtctgtgacagagggtggt
atcaaatacccagagacgactgagggaggccgccctaagcttgggggactaatggatcca
aggcagggagtgattgaaaggaccggtcgctgtcaaacctgtgcagggaacatgacagaa
tgtcctgggcactttggccacatcgaactggccaagcctgtgtttcacgtgggcttcctg
gtgaagacgatgaaggttttgcgttgtgtctgcttcttttgttccaaactgcttgtggac
tctaacaacccaaagatcaaggacatcctggccaaatccaaggggcagcccaagaagagg
ctcacacatgtctatgacctttgcaagggcaaaaacatctgtgagggtggggaggagatg
gacaacaagttcggtgtggagcagcctgagggtgatgaggatctgaccaaagagaagggc
catggtggctgtgggcggtatcaaccccggatccgtcgctcaggcttggagctatatgct
gagtggaaacatgttaatgaggattctcaggagaagaagatcctgctgagtccagaacga
gtgcatgagattttcaagcgcatctcggacgaggagtgttttgtgctgggcatggagccc
cgctacgctaggcctgagtggatgattgtcacagtgctgcctgtccccccactctcagtg
aggcctgctgtagtgatgcaaggctctgcccgcaaccaggatgatttgactcacaaactg
gctgacatcgtgaagatcaacaatcagctacgtaggaatgaacagaatggggcagcagcc
catgtcattgcagaggatgtgaagctccttcagttccatgtagccaccatggtggacaat
gagctgcctggcttgccccgtgccatgcagaagtctggacgtcctctcaagtccctgaag
cagcgcttgaagggcaaggaaggccgggtgcgagggaacttgatgggcaagcgagtggac
ttctcagcccgcactgtcatcacccctgaccccaacctatccattgaccaagttggtgtg
ccccgctccattgctgccaatatgacctttgcagagattgtcacacccttcaacattgac
agacttcaggaactagtacgcaggggaaatagccagtacccaggagccaaatatataatc
cgagacaatggcgatcgcattgacttgcgtttccaccccaagcccagtgaccttcaccta
cagactggctataaggtggaacggcatatgtgtgatggagacattgttatcttcaatcgg
cagccaaccttgcacaaaatgtccatgatgggtcatcgggttcgcatcctcccttggtct
acgtttcgcttgaatcttagtgtaacgactccgtacaatgcagactttgatggggatgag
atgaacttgcacctgccacagtctctggagaccagggcagagatccaggagctggccatg
gtgcctcgtatgattgtcacccctcagagcaatcgacccgtcatgggcatcgtgcaggat
acactcactgcagtgcgcaaattcactaagagagatgtcttcctggagcggggtgaagta
atgaacctcctaatgttcctatccacatgggatgggaaggtcccacagccagccatcctc
aagccccggcccctgtggacaggcaaacagatcttctctctcatcatacctggccatatc
aattgtatccgtactcatagtacccatcctgatgacgaggacagtggcccttacaagcat
atctctcctggggacaccaaggttgtagtggagaatggggaactgatcatgggcattctg
tgtaagaagtctctgggcacctcggctggctccttagtccacatctcctacctagagatg
ggtcatgacattactcgtctcttctactccaatattcagactgtcattaacaactggctc
ctcattgagggtcataccattggcattggagactctattgctgattctaagacttatcag
gatattcagaacactattaagaaggccaaacaagatgtaatagaggtcattgagaaggct
cataataatgagctggagcccactccagggaacacattgcgtcagacttttgaaaaccaa
gtgaatcgcattctcaatgatgctcgagacaagactggctcctcggcccagaaatccttg
tctgaatacaacaacttcaagtctatggtggtgtcaggagctaaaggttccaagatcaac
atctcacaggttattgctgttgtggggcagcagaacgtggagggcaagcggatcccattt
gggttcaagcaccggactttgcctcacttcatcaaggatgattatggacctgagagccgt
ggctttgtggagaactcttacctagctggcctcacaccaactgagtttttcttccatgcc
atggggggtcgagaggggctcatcgacacagctgtcaagactgctgagactgggtatatc
cagcggcggctgatcaagtccatggagtcagtgatggtgaaatatgatgcaactgtgcgg
aactccatcaaccaggtggtgcagctgcgctatggcgaggatggcctggcaggagagagt
gttgaatttcagaacctggctacgctgaaaccttctaacaaggcttttgagaagaagttc
cgcttcgattataccaatgagagggccctgcggcgaactctgcaggaggatctggtaaag
gatgtgctgagcaatgcacatatacagaacgagctggaacgggaatttgaaaggatgcgt
gaggatcgggaggtgcttagggtcatcttcccgactggtgacagcaaggttgttctcccc
tgtaaccttctgcgaatgatctggaatgctcagaaaatctttcacatcaaccctcgcctt
ccctctgatctgcaccccatcaaagtggtagagggagtcaaggaattgagcaagaagctg
gtgattgtgaatggggatgacccactaagccggcaggctcaggagaatgccacactgctc
ttcaacatccacctgcgatccacactatgctcccgccgcatggctgaggagtttcggctc
agtggagaggcttttgactggctgcttggggagattgaatccaagttcaatcaggccatt
gcccatcctggggaaatggtgggagctctggctgcacagtcccttggagaacctgctacc
cagatgaccttgaatacttttcattatgctggtgtgtctgccaagaatgtgaccctggga
gtaccccgacttaaggagctcatcaacatttctaagaagccaaagaccccatcactcact
gtcttcctgctgggccagtctgctcgagatgctgagagggccaaggacattctgtgccgc
ctagagcatacaacattgaggaaagtgactgccaacacagccatttactatgaccccaat
ccccaaagcacagtggtggcagaggatcaggagtgggtgaatgtctactatgaaatgcct
gactttgatgtggcccgaatctccccctggctgttgcgggtggagctggaccggaagcac
atgactgaccggaagctgactatggagcagattgctgaaaagattaatgctggttttggt
gatgacttgaattgcatctttaatgatgataacgcagaaaagctggtccttcgtatacgt
attatgaacagtgatgaaaacaagatgcaagaggaagaagaggtggtagacaagatggat
gatgatgtcttcctgcgctgcattgagtctaacatgctgacagatatgaccctgcagggc
atcgagcagatcagcaaggtgtacatgcacttgccacagactgacaacaagaagaagatc
atcatcacggaggacggggaattcaaggccctgcaggagtggatcctggagacggatggt
gtcagcttgatgcgggtattgagcgagaaagatgtggaccctgtgcgcaccacttccaat
gacattgtggaaatcttcacggtgctgggcattgaggctgtgcggaaggctctggagcgg
gagctgtaccatgtcatctcctttgatggttcctatgtcaattaccggcatttggcgctc
ttgtgtgataccatgacctgtcgtggccacttgatggccattacccgacatggagtcaac
cgccaggacactggacctctcatgaaatgttcctttgaggaaacggtggatgtccttatg
gaagcagctgcccatggggagagtgaccccatgaagggggtgtctgagaatattatgctg
ggccagctagctccagctggcactggctgttttgatctcctacttgatgcagagaagtgc
aagtatggaatggagatccccaccaacatccctggcttgggggctgctggacccactggc
atgttcttcggctcagcacccagtcccatgggaggaatttctcctgccatgacaccctgg
aaccagggtgcaaccccagcctatggcgcctggtccccaagtgttgggagtgggatgacc
ccaggggcagctggcttttctcccagtgctgcttcagatgccagtggtttcagcccaggt
tattctcctgcctggtctcccacaccaggctctccaggctctcctggcccttcaagccca
tatatcccttctccaggtggtgccatgtcacccagctactcgccaacatcacctgcttac
gagcctcgctcccctgggggctacacaccccagagtccctcatattcccccacttcacct
tcctactccccaacctctccatcctattctccaaccagtcccaactatagccccacgtca
cccagctactccccaacctctcccagttactcaccaacctctcccagctactcaccaacc
tctcccagctactcaccaacctctcccagctattcaccaacatcaccaagctattcgcca
acatcacccagctactccccaacctctcccagctactcaccaacgtctcccagctattca
ccaacatctcccagttactcaccaacttcacccagctactctccaacttcccctagctat
tcaccaacatctcccagctactcgcctacatctccaagctactcaccaacttccccaagt
tactcacccaccagtccaaactactctccaaccagtcctaattataccccaacgtcacct
agctacagcccaacatcacccagctactcgcctactagtcccaactacacaccaactagc
cctaactacagccctacctctccaagctactccccaacttcacccagctattcaccaacc
tcaccaagctattccccctcaagcccacggtacacaccacagtctccaacttatacccca
agctctcccagctacagccccagctctcctagctatagccctacatctcccaagtatacc
ccaaccagtccttcctacagccctagctcaccagagtataccccaacctctcctaagtac
tcgcctaccagccccaaatattcacccacttctcccaagtactctcctaccagccccacc
tattcacccactactccaaagtattcaccaacatctcctacttactcaccaacgtctcca
gtttataccccaacctcccccaagtattcacctactagccccacttattcaccaacctcc
cccaagtattcacccaccagccctacctactcgcccacctcccctaaaggctctacctac
tctcccacttcccctggctactcacccaccagccccacctacagcctcaccagcccagcc
atcagcccggatgacagtgatgaggagaattga
DBGET
integrated database retrieval system
