Mus musculus (house mouse): 98985
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Entry
98985 CDS
T01002
Symbol
Clp1, Heab
Name
(RefSeq) CLP1, cleavage and polyadenylation factor I subunit
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
98985 (Clp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmu03019
]
98985 (Clp1)
Enzymes [BR:
mmu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
98985 (Clp1)
Messenger RNA biogenesis [BR:
mmu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
98985 (Clp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
ATP_bind_1
AAA_18
MMR_HSR1
TniB
AAA_16
AAA_22
nSTAND3
CbiA
AAA_10
Motif
Other DBs
NCBI-GeneID:
98985
NCBI-ProteinID:
NP_598601
MGI:
2138968
Ensembl:
ENSMUSG00000027079
UniProt:
Q99LI9
LinkDB
All DBs
Position
2:complement(84553466..84557631)
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AA seq
425 aa
AA seq
DB search
MSEESNDDKKPTTKFELERETELRFEVEASQSVQLELLAGMAEIFGTELTRNKKFTFDAG
AKVAVFTWHGCSLQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEKEEERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGFSI
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGYGYQ
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDER
IREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDVEHQVFTVLSPAPRPLPKNFLLIMDIR
FMDLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggaatccaatgatgacaagaagccaacgactaagtttgaactagagcgagaa
acagagcttcgatttgaggtggaggcctctcaatcggttcagttggagttgttggctggc
atggcggagatctttggcacagagctgaccagaaacaagaaattcacttttgatgctggt
gccaaggtggctgttttcacttggcatggctgttctctgcagttgagtggccggactgag
gtggcttatgtctctaaggacacccctatgttgctttacctcaacactcatacagccttg
gagcagatgcggaggcaggcagaaaaggaagaagagagaggtccccgagtgatggtagta
ggtcctactgatgtgggcaagtccactgtgtgtcgactgctactcaactacgcagtgcgt
ttgggccgccgtcctacttacgtggagttagatgtaggccagggctctgtgtccatccct
ggtaccatgggggccctgtacattgagcgtccagcagatgtggaagaaggtttctccatc
caggcccctcttgtgtatcattttggctccaccacgcctggcaccaacatcaagctttac
aataagattacatctcgcttagcagatgtgttcaaccaaaggtgtgaagtgaacagaagg
gcttctgtgagtggctgtgtcatcaacacctgtggctgggtcaagggctatggttaccaa
gccctggtgcacgcagcgtcggcctttgaggtggatgtggttgtggttctggatcaagag
cgactgtacaacgaattgaaaagggacctgcctcattttgttcgaactgtgttgcttcca
aaatcagggggtgtggtagaacgttccaaggacttccggcgggaatgtagagatgaacgt
atccgtgagtatttctatggatttcgaggctgtttctatccccatgccttcaacgtcaaa
ttttctgatgtgaaaatctacaaagttggagcacccaccattccagattcctgtttacct
ctgggtatgtctcaggaagacaaccagctcaagttagtgcctgtcacccctggtagagat
atggtgcaccatctcctgagtgtgagcactgctgagggcacagaagagaacctttctgag
accagtgtggctggattcattgttgtgaccagtgtggatgtggaacaccaagtgtttact
gtcctgtctccagccccccgcccattgcctaagaactttcttctcatcatggatatccgg
ttcatggatctcaagtag
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integrated database retrieval system
