Merops nubicus (carmine bee-eater): 103781765
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Entry
103781765 CDS
T08417
Symbol
PRKDC
Name
(RefSeq) DNA-dependent protein kinase catalytic subunit
KO
K06642
DNA-dependent protein kinase catalytic subunit [EC:
2.7.11.1
]
Organism
mnb
Merops nubicus (carmine bee-eater)
Pathway
mnb03450
Non-homologous end-joining
mnb04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
mnb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
103781765 (PRKDC)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
103781765 (PRKDC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mnb01001
]
103781765 (PRKDC)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mnb03032
]
103781765 (PRKDC)
03400 DNA repair and recombination proteins [BR:
mnb03400
]
103781765 (PRKDC)
Enzymes [BR:
mnb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
103781765 (PRKDC)
Protein kinases [BR:
mnb01001
]
Serine/threonine kinases: Other
PIKK family [OT]
103781765 (PRKDC)
DNA replication proteins [BR:
mnb03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
103781765 (PRKDC)
DNA repair and recombination proteins [BR:
mnb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
103781765 (PRKDC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNAPKcs_CC1-2
DNAPKcs_CC5
DNAPKcs_CC3
DNA-PKcs_N
FAT
TPR_2
Motif
Other DBs
NCBI-GeneID:
103781765
NCBI-ProteinID:
XP_008947734
LinkDB
All DBs
Position
Unknown
AA seq
2482 aa
AA seq
DB search
VAAKMKQYKDELLASCLNFLLSLPHDIIMLDIKAYIPALQNAFKLGLSCTPMADLGLDAL
EDWSAHIPRHIMQPYYKDVLPLLDGYLKTSTSAAESQNNWEVRKLSRAAQKGFNKVVIQR
LRKAKTSSLDDSPSLEAVRARVAHLLGSLGGQINHNVVTATSAEEMMKKCVSWDTEKRLS
FAVPFADMKPVIYLDLFLPRVTELALSASDRQTKVAACELLHSIVTYMLGKASQMPEGRQ
GPPPMYQLHKRMFPVLLRLACDVDQVTRQLYETLVMQLIHWFTNNKKFESQDTVAKKEAI
LNGIVDPVDSTLRDFCAQCVREFLKWSIKQTTPRQQEKSPANTKSLFKRLYSLALHPSPF
KRLGAALAFNSIYREFREENSLVEQFVFEALVVFLESLALAHTDEKSLGTTQQCCDAINH
LKRIIKHKASSLNKEGRRRVPRGFPSKSVCLLDIVMWLLVQCGRPQTECRHKAMELFYEF
VPLLPGNKSPSSWLADVLKNQDIYFLIKKFEGGGSDAKSPSGILSQPTLYGVQETFSLQT
VMRWMDMFLAALDCYNTFFELRMIKPHEILGVTERSSFLESVQFFLKTIALHDIQAAEQC
FGCSWKGSTFSPQERDMYNYSKCTIIVRIMEFVTMILEMCQQDFWKFLEKELLNGSLIEL
LVVTVCDPSHVGFNTADVQVMKNLPDISVRLMKALIKSPYKESLELCMKKRITWQSLEDL
CSLDLFNSDARFDQVKLSAVLAACKQLQKSGLLQSVLHNQDEGPHCSVGCKLLSVVYKGI
APGGERVSLPSLDVSSKRLADRLLQLAFAIDDQCEELVSLLLNTVVLSVPLSGASQKNLI
NFSHGQYFYSLFSETINQQLLKNVDVIIAQLMESSVSNPKMVGSILNGMLDQSFRERSVR
KQQGVKLVTAVLRNWEKLDSWWAKGSDPESKVAVLTLLAKVLQIDSSVSFDTHHEAFTAV
FNTYTSLLIDQNLGLNLKGQAVIILPFFTNLTGEKLSDLKNALDQLVAFNFPMRSDEFPK
GTLKHNNYVDCTKKFLDALELSQSPMLLQLMTEVLCRDHRHFMEDLFQASFKRISRRSTN
DKQVILLETVHKMFQSEDLLSNTTRQAFMDRSLLTLLWHCSLDALREFSGKIIVQAMDTL
NSRFTKSNEYAFDTQVTKKMGYYKLLEVMYVRLSKEDVYSKESKINQAYRGSVSAEGNEL
TKTLIKSCYDAFTENMAGESQLLEKRRQYHCAAYNCAIAVISCVFTESKFYQGFLFTEKS
EKNLLIFENLIDLKRQYEFPVEIEVPLERKKRYIAIRKEAREAGNSDQDEPKYLASASYM
MDSSLSEEMSQFDFSTGVQGFSYSSQDVTASSARFRRKESTEYMVLNDEMELEMDELNQH
ECMASMTTLIKHMQRNQITPKVEEGTVPVDLPLWMKFLHGKLGNPSVPLNIRLFIAKLIV
NTEDVFRPYAKQWLGPLLQLVVSGNNGGEGIHYMVVEIVVTILSWTSVATPKGNIKDEIL
ANRLLEFLMKNAFHQKRAVFRHNLEIIKTVIECWKNCLSIPYSLIFEKFSSGDPDTKDNS
VGIQLLGIVLANNLPPFDLKCEIDRVRYFQALTNNMGSLKYKEVYAAAAEVLGLALRYIA
ERENVLEDPVYDCVIRQLKHHQNAQQDKFIQCLNKVVKNFPPLADRFMNAVFFLIPKLHG
VMKTYCLEVIMCRAEEVPDLHLQLKSKDFFQIMNHRDDERQRVCLDIVYKMLSKLKPPEL
KELLPGVTGFISHPSVVCRQRMYDILMWIYDNYSDPESQADGDSQEILKLAKEILLQGLI
DENAELQLIVRNFWSDETRLPTNIVDRMLSLLNSLYSAKIETQYLSLITNFLLEMTSKSP
DYSRKIFEHPLSECKFQDFVIDSSWRYQSTMLTPMFVETQASQSVHRNLSQERSLSASGS
ISGRVRATQRQYEFTPTQHASGRSSFNWLTGSSIDTLADYTVPSSSESLSSSMLLVTKRS
EKFKQATWKPVGPDFGKKTLSLPGDEVDSKTKGVEERAEILRLRRRFLKDQERLSLIYAR
KGVAEQKREKEMKSELKMKHDAQVTLYRSYRVGDLPDIQIEYCSLIAPLQGLAQKDPTFA
KQLFSSLFGGIFHEVEKSKTPSEKKSIIQKLVNNFNNFLSSSLSYFPPFIACIQEMSYQH
RELLELDPANVSTSCLASLQQPVGILLLEHALMALAPAEEPPAKRMRGRTELPPDVIRWI
ELAKLYRSLGDYDVLRGIFSGKIGTKEITQKALLAEARSDYAEAAKYYDEALSKDDWQDG
EPAEVEKDFWELASLECYDHLTEWKSLEYCATINIDSGKPPDLSKTWNDPFFQETYLPYI
IRSKLKLLLGGENDQTLLTFIDEAMKTEQKKAIIEMHYSQELSLLYILQDDFDRAKYYIS
NGMQIFMQSYSSIDTLLYQSRMTKLQSVQALTEIQDFINFMTKRSNLASQASLKRLLRIW
TSRYPDAKMDPMNIWDDIITNR
NT seq
7445 nt
NT seq
+upstream
nt +downstream
nt
gttgcagcaaaaatgaaacagtataaggatgagttgttggcctcctgtctgaattttttg
ctctctttaccacatgacatcatcatgcttgatattaaagcctatattcctgcactgcag
aatgcctttaagctgggccttagctgtaccccaatggctgatctggggctggatgctttg
gaagactggtcagctcacatccccagacatataatgcaaccttactacaaggatgttcta
cctcttctggatggttatttgaaaacctctacatctgcagctgaatcccagaataactgg
gaagtaaggaaactctctcgagcagcccagaagggatttaataaagttgtgatacagcgt
ttaagaaaagcaaagacttcttcattggatgacagtccctccttggaagcagtaagggct
agagtggcacaccttcttggatctctgggagggcagatcaaccacaacgtagttacagct
acctctgcagaagagatgatgaagaaatgtgtgtcctgggacactgagaagcgtctgagc
tttgctgtgccatttgcagatatgaagcctgtcatctacttggatttgttcttacctcgt
gtgactgaactggctctttctgcaagtgacagacaaaccaaagttgcagcctgtgagctg
ctccacagcatagtcacatacatgctggggaaagcatctcagatgccagaaggacgacag
ggccccccacccatgtatcagttacacaagcgaatgtttccagtactgcttcgtcttgcc
tgtgatgtggaccaggtaacaagacagttgtatgagactttagtcatgcaactcattcac
tggtttaccaacaacaaaaaatttgagagtcaagatacagtggcaaaaaaagaagctatc
ttgaatggcatagtggacccagttgacagcactttgagagatttctgtgctcagtgtgta
cgagagtttttgaagtggtctattaaacagacaacaccaaggcagcaggagaagagccca
gcaaacaccaagtctctttttaaacggttgtacagtctcgctcttcatcccagtcctttc
aagagactgggtgcagcacttgcttttaacagcatctacagggaattcagggaagaaaat
tctctggtggagcagtttgtatttgaagcattggttgtatttctggaaagtctggcttta
gcccatacagatgagaaatcattaggaactactcagcaatgttgtgatgctattaatcac
ctgaagcgcataatcaaacacaaagcatcttctctgaacaaggagggaaggcgacgagtg
ccacgaggatttccatctaaatcagtgtgtcttctggacattgtcatgtggctcttggtg
cagtgtggacgccctcagacggagtgccgacataaagccatggagctcttctatgagttt
gttcctttgttaccaggaaacaagtctccatcttcttggttggctgatgttctaaaaaac
caagatatttattttctcattaagaaatttgaaggaggtggcagtgatgccaaaagtcca
tctgggatcctttctcagccaactctctatggtgtgcaggagaccttcagcttacagact
gtcatgagatggatggatatgttcttagcagcactggactgctacaatacattctttgag
ctgcggatgatcaaacctcatgagatactgggtgtaactgaaagatcctcattcttggag
tctgtgcagttcttcctcaaaaccattgctttgcatgacatccaggcagcagagcagtgc
tttggctgcagctggaaaggcagcaccttcagtccccaggagagagacatgtacaattac
agcaagtgcaccatcatcgtccgaatcatggagtttgtcaccatgatcctggagatgtgc
cagcaggatttctggaagtttctcgaaaaggaactgcttaatggaagccttatagagctt
ctggtggtgacagtgtgtgatccatcacatgtagggtttaacacagctgatgtgcaagtc
atgaagaatctcccagatatctcagtaagactcatgaaagctttgatcaaatctccctat
aaggaatctttggaactgtgcatgaagaaaagaattacatggcagagcctcgaggacctt
tgttctcttgatctgtttaattcagatgcacgatttgaccaagttaagctcagtgctgtc
cttgctgcctgcaagcaactccagaagtctggcctgcttcagtctgttcttcacaatcag
gatgaagggcctcattgctcagttggctgtaagcttctttcagttgtttacaaaggcatt
gctcctgggggtgagagggtctctcttccttccctggacgtcagcagtaagcgtttagct
gaccgactcctgcagctggcctttgctattgatgaccagtgtgaggagctagtaagtctg
ctgttgaacacagtggtgttgtctgtgccactatcaggagcatcccagaagaacctcatc
aatttctctcatggacagtatttctacagcttgttctcagagaccatcaatcaacagctg
ctgaaaaacgtggatgtgattatagcccagcttatggaatcatctgtcagcaatcccaaa
atggttggcagcattctgaacggcatgttagatcagagttttagggagcgttctgtacgc
aagcagcaaggagtgaaactggtcacagctgtcctaaggaactgggagaaacttgacagc
tggtgggccaaaggttcagatcctgagagcaaagtggcagtcttgaccctgctggcaaaa
gttctgcagatagactcttcagtttcttttgatacccatcatgaagcatttacagctgtt
tttaatacctataccagtctacttattgatcagaatttaggcttaaatcttaagggccaa
gcagtgataattctcccattctttactaatttgactggagaaaaacttagtgaccttaag
aatgctctggatcaacttgtagctttcaattttcccatgaggtctgatgagtttcccaaa
ggaaccttgaagcacaataactatgtagactgcactaagaagtttctagatgctttagaa
ttgtctcagagtccaatgctgttgcagctgatgacagaagtcctctgtagggaccacaga
cacttcatggaggacttatttcaagccagctttaaaagaatttcccgaaggagcaccaat
gacaaacaagtgatactgttggaaactgttcacaaaatgttccagagtgaagacctcctt
tcaaatactactcgtcaagcgtttatggatcgctccctcctcaccctcctgtggcactgc
agcttggatgcactgagagagttctctggcaagattatagtacaggctatggatacactt
aattccaggtttacaaagtccaatgaatatgcttttgatacacaagtcaccaagaagatg
gggtattacaagctgctggaggtgatgtacgtgcgtctctcaaaagaggatgtttactcc
aaggagtctaaaattaaccaagcttaccgtggctctgtgagtgcagaaggaaatgaactt
accaagacactaataaagtcttgctatgatgcctttacagaaaacatggcaggagagagt
cagctgttggagaagaggagacagtatcactgtgcagcatataattgtgctattgctgtt
atcagttgtgtcttcactgaaagtaaattttatcagggctttctttttacagaaaaatca
gaaaagaacttgctgatttttgagaatctgatagacctgaagcgtcagtatgaatttcct
gtagagattgaggtgcctctagagaggaagaagcggtacattgctattagaaaggaggcc
agggaggctgggaatagtgaccaagatgaacccaagtatttagcttctgcatcgtacatg
atggatagcagcttgagtgaggaaatgagtcagtttgatttctccactggagtccaaggt
ttttcttatagctcccaagatgttactgctagcagcgctcgtttcagaagaaaggagtcc
acagaatacatggttttaaatgatgaaatggagctggaaatggatgaactcaaccaacat
gaatgtatggcctctatgaccactctgattaaacacatgcagaggaaccagatcacaccc
aaagtggaagaggggacagttccagtagatcttcctctatggatgaaatttctgcatggc
aaattaggaaacccatcagtgccactcaatattcgcctctttatagcaaaacttattgtt
aacactgaggatgttttccgaccttatgcaaagcagtggcttggaccattgctgcagctt
gttgtttctgggaataatggaggtgaaggaattcattacatggttgtggaaatagtagtt
actatcctttcctggacaagtgtggccactcccaaagggaatattaaggatgagatttta
gccaacagattgcttgagttcttgatgaagaatgcttttcaccaaaaaagagctgtgttc
agacacaacctggaaattataaagacagttatagagtgttggaagaactgtctttccata
ccttacagtttaatatttgagaagttttccagtggagaccctgatacaaaagataattca
gtgggaattcagctactgggaattgttcttgctaacaatttacctccctttgacctgaag
tgtgagatagatcgtgtcaggtattttcaggctttgaccaacaacatgggctcattaaaa
tataaagaagtttatgcagctgcagcagaagttttgggccttgctcttcgatacattgct
gagagagaaaatgtacttgaagatccagtttatgattgtgtcataagacaattaaaacat
catcagaacgcccaacaggataagtttattcaatgcttgaataaagttgttaagaatttc
ccacctcttgctgacaggtttatgaatgcagtattctttttgatacctaaactccatggt
gtgatgaaaacctactgtctagaagtaatcatgtgccgggcagaggaagtacctgatctc
cacttgcagttaaagagtaaagactttttccagatcatgaatcacagggatgatgaaagg
cagagggtttgtttggatatagtgtacaagatgctatctaaactaaaaccaccagaactt
aaggaacttcttcctggagtgacagggttcatttcacacccttctgtagtatgtcgacag
cgcatgtatgatattctgatgtggatttatgataattacagtgatccagaaagccaggca
gatggtgattctcaggagatactcaaactggcaaaagaaatactgcttcaaggactaatt
gatgagaatgctgaactgcaactaattgtgaggaatttttggagtgatgagacaaggtta
cccacaaatattgttgatcgcatgctgtcgttgttaaattctttatattctgccaagatt
gaaacacagtacttgagtctgatcacaaattttctacttgaaatgactagcaagagcccg
gattattccagaaaaatatttgagcacccactgtctgaatgcaagtttcaggactttgtg
atcgactccagctggcgttaccaaagcaccatgctaacacctatgtttgtggagactcaa
gcctctcagagtgtccacaggaatttgtcccaggaaaggtccctctctgcttctgggtca
atcagtggccgagtgagggccacccaacgccagtatgaattcacacctacacagcatgcc
agtggtagaagttctttcaattggctaactggaagtagcattgacacgttggcagactac
acagtcccttcatcctctgaatccttgtcttcatccatgctgctggttaccaaacggagt
gaaaaatttaaacaagcaacttggaaaccagtggggccagactttgggaaaaaaacattg
agtttgcctggagatgaagtggacagcaaaactaaaggtgtagaagagcgagcagaaatt
ctgagattgaggagacggttcttgaaggaccaagagagactgagtctgatttatgctaga
aaaggtgtggctgagcagaaaagagaaaaggagatgaagtctgagctgaagatgaagcat
gatgcccaggttactttgtacagaagctaccgagtaggagaccttcctgacatccagatt
gagtactgcagtctcattgcccctctgcagggccttgcccagaaagatccaacatttgcc
aagcagcttttcagtagcttgtttggtggaatttttcatgaagtagaaaagtctaaaact
ccttctgagaaaaaaagcatcatccagaagctggtgaacaacttcaacaatttcctgagc
tcgagcctgtcttactttccaccattcattgcctgcatccaggaaatgagttaccagcac
agagagctactagaactggatccagctaacgtgagcacgagctgccttgccagcttgcag
cagccagtgggcatcctcctcctggagcatgccctgatggctctggcccctgcggaggag
cccccggccaagcggatgcgtgggaggacagagcttcccccagatgtcatcagatggatt
gaacttgccaagctgtaccgatctcttggggattatgatgtccttcgaggcattttcagt
ggtaagattgggactaaggaaattacacagaaagcattgctggcagaagcaaggagtgat
tatgctgaagcagccaaatattatgatgaggcactctctaaagacgactggcaagatgga
gagccagcagaagtggagaaggacttctgggaacttgcatctctggaatgctatgaccac
ctcacagagtggaagtctctggagtattgtgctaccattaatatcgatagtgggaaacct
ccagacctaagcaaaacgtggaatgatccattttttcaggagacatatctgccctatatc
atacgcagcaagttgaagttactgcttggtggggaaaatgaccaaactttgctaactttt
attgatgaggcaatgaagacagaacaaaagaaagccattatagaaatgcattacagccag
gagcttagtctcctttacatcctgcaagatgattttgacagagccaaatattacattagc
aacggcatgcagatcttcatgcagagctattccagtattgatactttgttatatcaaagt
cgaatgaccaaactgcagtctgtacaagctttgacagaaatacaggatttcatcaacttc
atgaccaagagaagtaacttagcttcacaggcttcccttaagagacttctcagaatttgg
acaagcagatatccagatgctaaaatggatcctatgaacatctgggatgatatcattaca
aatcg
DBGET
integrated database retrieval system
