Mustela nigripes (black-footed ferret): 132003406
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Entry
132003406 CDS
T09425
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04721
Synaptic vesicle cycle
mnp04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
132003406 (SLC6A4)
04721 Synaptic vesicle cycle
132003406 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mnp02000
]
132003406 (SLC6A4)
Transporters [BR:
mnp02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
132003406 (SLC6A4)
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
132003406
NCBI-ProteinID:
XP_059234823
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Position
16:complement(43211761..43245238)
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AA seq
630 aa
AA seq
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METTPLNSQKELPACKDKDDCQENGVLQKGVPVPEDKVESGHISNGYSAVPSPGAADDTQ
HALPAATTALVAEPHQGERETWGKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIM
AWALYYLISSFTDQLPWTSCTNSWNTGNCTNYFSGNNVTWTLHSTSPAEEFYTRHVLQIH
RSKGLQDLGGISWQLTLCIMGIFAVIYFSIWKGVKMSGKVVWVTATFPYIILSVLLVRGA
TLPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWAKRREWFVLGVVITCFFGSLAT
LTFGGAYVVKLLEEYATGPAVLTVVLIEAVAVYWFYGITQFCSDVKEMLGFSPGWFWRIC
WVAISPLFLLFIICSFLMSPPQLRLFQYNYPQWSIILGYCIGTSSFICIPTYIAYRLIVT
PGTFKERIIKGITPETATEIPYGDIHLNAI
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacgcccttaaattcccagaaggagctgcccgcgtgtaaggataaagacgat
tgtcaggaaaatggggttctacagaagggggtccccgttcctgaggacaaggtggagtct
ggccacatctccaatgggtactcggcggtgccgagccctggtgccgcagacgacactcag
cacgcccttccagctgccaccactgctctagtcgccgagcctcaccaaggggagcgggag
acctggggcaagaagatggatttcctcctgtcggttattggctatgcggtggacctgggc
aacgtctggcgctttccctacatctgctaccagaatggagggggggctttcctcctgccc
tacacgatcatggccattttcggggggatcccactgttctacatggagcttgcactgggc
cagtaccaccgaaacggatgcatttccatatggaggaaaatctgcccgattttcaaaggg
atcggctacgccatctgcatcatcgccttctacatcgcctcctactacaacaccatcatg
gcctgggcgctctactacctcatctcctccttcaccgaccagctgccctggaccagctgc
accaactcctggaacaccggcaactgcaccaactatttctcggggaacaacgtcacctgg
acgctgcactcgacgtcccccgctgaagaattttacacgcgccatgtcctgcagatccat
cggtctaagggacttcaggacctggggggcatcagctggcagctcaccctctgcatcatg
ggcatctttgctgttatctacttcagcatctggaaaggtgtcaaaatgtctggcaaggtg
gtatgggtgacagccaccttcccttatatcatcctttctgtcctgctggtaaggggggcc
accctccccggagcctggaggggtgttctcttctacttgaagcccaactggcagaaactg
ctggagacgggggtgtgggtcgatgctgccgctcagatcttcttctctcttggtcctggc
tttggggtcctgttggctttcgctagctacaacaagttcaacaacaactgttaccaagac
gccctggtgaccagcgtggtgaactgcatgacgagctttgtttcgggatttgtcatcttc
acggtgctcgggtatatggccgagatgcggaatgaggatgtgtccgaggtggccaaagat
gcaggccccagcctcctcttcatcacgtatgcagaagccatagccaacatgccagcatcc
actttctttgccatcatcttcttcctgatgttaatcacgctgggcctggacagcaccttt
gcaggcttggagggggtgatcacagctgtgcttgacgagtttccgcacatctgggccaag
cgccgggagtggtttgtgcttggtgtcgtcattacgtgcttctttggctccctggccacc
ctgactttcggaggggcctacgtggtgaagctgctagaggagtacgccacgggccctgcg
gtgctcaccgttgtcctcatagaggctgtggctgtgtactggttttatggcatcactcag
ttctgcagtgacgtgaaggaaatgctcggcttcagccctgggtggttttggaggatctgc
tgggtcgccatcagccctctctttctcctgttcatcatctgcagttttttgatgagcccg
ccccagctccgacttttccagtataactaccctcagtggagtatcatcctgggttactgc
atagggacctcgtctttcatctgcatccccacatacatagcgtaccggctgatcgtcact
ccagggacatttaaagagcgtattattaaaggtatcactccagaaacagcgacagaaatt
ccctatggggacatccacttgaatgccatataa
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