Mustela nigripes (black-footed ferret): 132004541
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Entry
132004541 CDS
T09425
Symbol
BRIP1
Name
(RefSeq) LOW QUALITY PROTEIN: Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03440
Homologous recombination
mnp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
132004541 (BRIP1)
03460 Fanconi anemia pathway
132004541 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mnp03400
]
132004541 (BRIP1)
Enzymes [BR:
mnp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
132004541 (BRIP1)
DNA repair and recombination proteins [BR:
mnp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
132004541 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
132004541 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
DUF4769
Motif
Other DBs
NCBI-GeneID:
132004541
NCBI-ProteinID:
XP_059237056
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Position
16:33901326..34082405
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AA seq
1250 aa
AA seq
DB search
MMSSVWSEYTIGGVKITFPYKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCS
ALAWQQSLSGKPVDESLSKKPEVTSSCCCACHSKNFTNIDLNEGTSHHFNSPSTPPSERN
DTSSTYQDSPEKTTLAAKLSAKKQASIKRDENDDFQVEKKRIRPLETTQQIRKRHCFEKE
VHHLDAKVASGKTTKLNSPLGKINSFSPQNTPGHCSRCCCSTKQGSSQDSSNATKKDHGG
KSKIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEVIGNFNRNEKCM
ELLDGKNGKSCYFYHGVHKISDQNTLQTLQGMCKAWDIEELVSLGKKLKACPYYTARELI
EDAHIIFCPYNYLLDAQIRESMDINLKEQIVILDEAHNIEECARESASYSVTEVQLRFAR
DELDSMVNNNIRKKDHEPLRAVCYSLINWLEANTEHLVERDYESSCKIWSGSEMLLNLHK
MGITTATFPILQGHFSAVLQKEEKVLPIHGKEEARVVPIISASTQIMLKGLFMVFDYLFR
QNSRFADDYKVAIQQTYSWINQIDTSDKNGFFALAKNKKRSRQKTAIHVLNFWCLNPAVA
FSDINGKVWTIVLTSGTLSPMKSFSSELGVTFTIQLEANHVINNSQVWVGTIGSGPKGRN
LCATFQHTETFEFQDEVGELLLSVCHTVHQGILCFLPSYKLLEKLKERWLYTGLWHNLEL
VKTVIVEPQGGEKTDFDELLQVYYDAIKCKGEKDGALLVAVCRGKVSEGLDFSDDNARAV
ITIGIPFPNVKDLQVELKRQYNDQHSKLRGLLPGRQWYEIQAYRALNQALGRCIRHKNDW
GALILVDDRFRSNPSRYISGLSKWVRQQIQHHSTFERALESLAEFSKKHQKVIDVSREDR
KFIQDNESTLEVTCLKDSSLTYLSEVTSPLAPENPRKDEAKARVHEHQRHKITKSPSLPR
GIISRKEGDDPVLFEETPQAVKAENTVISRSTSPTFNKQTKRASWSSFNSLGYYLTDEII
AAAPKFRLPEDSASSVSAFETEKGCETVFPLTDKCESSALMVNASFGPCPQSEITTSSIK
IDSNLLKRNDSKQLFCREEALDLDPELSPVGEEAKLSTSHRASETEAEDESIYFSPELYD
PMDTNEEKNELVESDRDNRLANHSNCILVEDLFEIKTMKGVDSVQEMKAEDCTDTKLNXL
MHITESKIRNIGNNVKTTHKQIGTEKTCETDIKKFKQSPSKNKGVFHGVR
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttcagtttggtctgaatatacaattggtggggtgaagattacctttccttat
aaagcatacccatcacagcttgctatgatgaattctattgtcagaggattaaatagtaag
caacattgtttgttggagagccccacaggaagtgggaaaagcttagccttactttgttct
gctttggcatggcaacagtctcttagtgggaagccagtggatgaaagcttaagtaaaaaa
cctgaagtaacatcatcatgttgttgtgcatgccattcaaagaattttacaaacattgac
ttgaacgaaggaacttcacatcatttcaacagtccaagtacaccaccttctgaaagaaat
gacacttcatcaacttatcaagattctcctgaaaaaactacgctggctgcaaaactatct
gccaagaaacaggcatccataaaaagagatgaaaatgatgattttcaagtagagaagaaa
agaattcgacccttagaaactacacagcagattagaaagcgtcattgttttgaaaaggag
gtacatcatttggatgcaaaagttgcttcaggcaagaccacaaaactcaattctccatta
ggaaagataaattccttttctccacaaaatacccctggtcactgttccaggtgttgttgt
tctactaaacaaggaagcagtcaagattcctcaaatgccactaagaaggatcatgggggg
aaatccaagatacccaaaatatattttgggacacgcacacacaaacagatagctcagatt
actagagaactccggaggaccgcgtactcaggggtcccaatgactattctctccagcagg
gatcatacttgtgtccatcctgaagtaataggtaacttcaacagaaatgaaaagtgcatg
gaattgctggatggaaaaaatggcaaatcctgctatttttatcatggtgtacataaaatt
agtgatcaaaacacattacaaactcttcaagggatgtgcaaagcctgggatatagaagaa
cttgtcagcttggggaaaaaactaaaggcatgtccgtattacacagcacgagaactaata
gaagatgctcacataatattttgtccttacaactatcttctagatgcacaaataagggaa
agtatggatatcaatctcaaagaacagattgtcattttagatgaagctcataacattgaa
gagtgtgctcgggaatcagcaagttacagtgtaacagaagttcagcttcggtttgctaga
gatgaactagatagtatggtcaacaataatataaggaagaaagaccatgaacccctacga
gctgtgtgctatagcctaattaattggttagaagcaaacactgaacatcttgtggaaagg
gattatgaatcatcatgtaaaatatggagtggaagtgaaatgctcttaaatttacacaaa
atgggcattaccactgctacttttccaatattgcagggacatttttctgctgtccttcaa
aaagaagaaaaagtcttaccaattcatggtaaagaggaggcaagagtagtaccgattatt
agtgcatcaactcaaataatgctcaaaggactttttatggtgtttgactatctttttagg
caaaatagcagatttgcagatgattataaagttgctattcaacagacttattcttggata
aatcagattgatacttcagataaaaatggattctttgctctggcaaaaaataagaaacgt
tcaagacagaaaactgcaattcatgtgctaaacttttggtgcttaaatccagctgtggcc
ttttcagatattaatggcaaagtttggacaattgttttgacatctgggacattatcacca
atgaaatccttttcttcggaacttggtgttacatttactatccagctagaggccaatcat
gtcattaataactcacaggtttgggtgggcaccattgggtcgggccccaagggtcggaat
ctctgtgctaccttccagcacacagaaacatttgagttccaggatgaagtgggagaactt
ttgttatctgtgtgtcatactgtgcaccaaggaattttgtgtttcttgccatcttacaag
ttattagaaaagttaaaagaacgttggctctacactggtttatggcataatctagagttg
gtgaagacagtcattgtagaacctcagggaggagaaaaaactgattttgatgaattactg
caggtgtactatgatgcaatcaagtgcaaaggcgagaaagatggagccctcttggtagca
gtttgtcgtggtaaagtgagcgagggtctggatttctcagatgacaatgcccgtgctgtc
ataacaatagggattccttttccaaacgtgaaagatctacaggttgaactaaagcgacaa
tacaatgatcagcactcaaaattgagaggtcttttacctggtcgtcagtggtatgaaatt
caagcatatagggccttaaaccaggccctaggtaggtgtattcgacacaaaaatgattgg
ggagctcttattctagtggatgatcgcttcaggagtaatcccagtcgatatatatctgga
ctttctaaatgggtacggcagcagattcagcaccattcaacttttgagagggcactggag
tccttggctgaattttccaaaaaacaccaaaaggtcattgatgtatccagagaggacaga
aagtttatacaggacaatgagtctacacttgaagtgacctgtttgaaggacagtagttta
acttacttatcagaagtgacaagtcctctagcaccagaaaatcctaggaaagatgaagca
aaagcacgtgtccatgaacaccagcgtcataaaataactaaaagtccatctctaccaaga
ggcatcatctctagaaaggaaggagatgatcctgtattatttgaagagactccccaggca
gtgaaagcagaaaatactgtgatttccagatctacaagcccaaccttcaacaaacagaca
aagagagctagctggtctagctttaattctttgggatattaccttactgatgaaattata
gctgcagctcctaagttcaggttaccagaagactctgcctctagtgtttctgcttttgaa
accgaaaagggatgtgaaacagtttttccactcactgataaatgtgagtcctcagctctg
atggtaaatgcatcatttggaccatgccctcagtcagaaatcactacttcatcaataaag
attgattctaatcttcttaaaagaaatgattccaaacagctgttctgccgtgaagaagcc
ctggatctggaccctgaattgtctccagttggtgaagaagctaaactttccacctcacat
agagcttctgaaacagaagcagaggatgaatctatctatttttcacctgagctttatgat
cctatggatacaaatgaagaaaagaatgaactagttgaaagtgatagagacaatagattg
gctaatcattcaaattgcattttagttgaggatctttttgaaattaaaactatgaaagga
gtggattcagtccaagaaatgaaagctgaggattgcacagacacaaagttgaattgactc
atgcatatcacagaaagtaaaatccgtaacattggtaataatgtaaaaacaactcataaa
caaattggaacggagaaaacttgtgaaacagatataaagaaatttaaacagtctccttcc
aaaaataaaggtgtgttccatggtgttaggtag
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integrated database retrieval system
