Mustela nigripes (black-footed ferret): 132016160
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Entry
132016160 CDS
T09425
Symbol
TARBP1
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
mnp
Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mnp03016
]
132016160 (TARBP1)
03036 Chromosome and associated proteins [BR:
mnp03036
]
132016160 (TARBP1)
Enzymes [BR:
mnp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
132016160 (TARBP1)
Transfer RNA biogenesis [BR:
mnp03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
132016160 (TARBP1)
Chromosome and associated proteins [BR:
mnp03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
132016160 (TARBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
Motif
Other DBs
NCBI-GeneID:
132016160
NCBI-ProteinID:
XP_059253283
LinkDB
All DBs
Position
4:109714851..109803519
Genome browser
AA seq
1615 aa
AA seq
DB search
MERVLAETLLSQSRDPRGLLGALCRGEASAERVETLRFLLQRLEDAEERGGGGGAGALPE
AAREVAAGFLVPLLRGLRGRPAGAPDPDLPARDRRRVLRAATAALRSCARLAGGPQLAAA
LAEEALRDLVAGGPAAGAEAAVEVLAAVGPCLRPHEDGPLLERVAQAALALALGAGGERD
EAGPAEDAAALAAGRLLPALGQCGGAALRAVWAGLVAAGAPSGPGRVGPRLLVLSALAER
LLPEPGADRGPRAGEEDPDARRCWRFWRTVQAGLTQAPDALTRKRARYLLQRAVEVSAER
GAPCACGPREGTGPSLFWWSEKKKDELLKFWENYILILETLEGNQIHVIKPVLPKLNSLF
EYAVSEENGCWLFHPSWHMCIYKRMFESENKILTREGVIHFLELYETRSLPFAPEFSEFI
IGPLMDSLSESSLYSRSPGQLIGSGSPLGLKLQKFLVTYVSLLPEEIKSSFLLKFIQKMT
SRHWCAIPILFLSKALANVPRCKALGIEGLLALRDVLQCTMITHQILLRGAAQCYLLQTA
MNLVDVEKVTLSDVSTFLMSLRQEESLGRGTSLWTELCDWLRVNESCFGRASACNPTGLP
ETPSLNAYVKNLVQEYITSPAGETGEDCFMPDWFEAKLVAMMVLLAIDVEGMKTQYSEKR
RTQNVLRIFLDPLLDSLLKLGTNAYMPVLRADRCLQLLLKLLHTCMLTGSGARDDEVFTL
LQSFAMSATESVSDFILRRLTMNELSSVLDLDRCHLYLMVLTELINIHLKVGWKRGNPIW
RVISPLKNASIRHLQDTDSGQEPTLAGQIQRVVSMAALAMVCEAVDQKPELQLDSLEPGP
TERFLASLPLNHMLQKPHPEEHSSFSEDSAASQGWGKVVAQYIHDQWVCLSFLLRKYHTH
IPSLEGDVPDPVLPAVQMPARTLQSALGALTVLPSDQVLPVFHCMKVLVPKLLTSSESLC
VESIDMAWKIISALSNTQLIFWSNLKAFVQFVFDTKVLTIAAKIKGQAYFKIKEIMYKMI
EMSAIKTGVFNTLISYCCKSWIVSASDVSQVSLSSAKNYTELILEGCVFGTVFRRDQRLT
QDVQTYIENLGHDCAANTVIENTKREDHYVRICAVKFLCLLHGSNMSHKLFMEDLAIKLL
DKDESVSKSRTRYYVNSQQHRLKNRVWQTLLVLFPSFDQNFLNRIIDKIFQAGFINNQAS
IKYFIEWIIILILHKFPQFLLKFWDCFSYGEENLKTSICTFLSVLSHLDIITQNIPEKKP
VLKQALVTVLQWCFSHNFSIRLYALAALKKVWSMCKALRVEELEALTSVIESSLNQVENM
PGTGNAKKNWQRIQEHFFFARFHPVRDYCLETIFYNLPRLSGLVEEEWIAIGKFTRFTDI
PSDAGFQWYLSPTHLCELKPGDWAQQDVGSHLGEADSQSEWTDVQKKIIPWKNNAPDLDL
ELVFQDRVAKLGKSISRLIVVASLIDKPTNLGGLCRTCEVFGASALVLGSLQCVRDKQFQ
GLSVSAEQWLPLVEVKPPQLIDFLQQKKTEGYTVIGVEQTAKSVDLTQYSFPERSLLLLG
NEREGIPANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQLLRHGGAES
NT seq
4848 nt
NT seq
+upstream
nt +downstream
nt
atggagcgggtcctcgcagaaacgctgctgtcgcagagccgggaccctcggggcctgctc
ggagcgctgtgccgcggggaggcgtccgcggagcgcgtggagacgctgcgcttcctgctg
cagcgcctcgaggacgcggaggagcgcggtggcggcgggggtgcgggcgcgctcccggag
gcggcgcgcgaagtcgccgccgggtttctggtgccgctgctgcggggcctgcgcgggcgc
cctgcgggcgccccggaccccgacctgccggcccgggaccgccggcgcgtgctgagggcc
gcgaccgccgccttgcgctcgtgcgcccgtctcgccgggggcccgcagctggcggccgcc
ctggcggaggaggcgctgcgcgaccttgtggccggggggcccgcggccggcgcggaggcg
gcggtggaggtgctggcggcggtcgggccctgcctgcggccccacgaggacgggccgctc
ctggagcgggtggcgcaggccgccctcgccttggcgctgggcgccggcggggagcgggac
gaggccgggccggcggaggacgcggcggcgctggcggccgggaggctgctgccggcgctg
ggccagtgcggcggggcggcgctgcgggccgtctgggccgggctggtcgcggccggagcg
ccttcggggccggggcgcgtcgggccgcggctgctggtgctgagcgccctggccgagagg
ctgctgcccgagcccggcgccgaccgcggcccccgagcgggcgaggaggaccccgacgcg
cggcgctgctggcgcttctggaggaccgtgcaggcggggctgacgcaggcccccgacgcg
ctgacgcgcaaacgggcgcgctacctgctgcagagggcggtggaggtgtcggcggagcgc
ggcgcgccctgcgcctgcggcccccgggaaggaaccggcccaagtctgttttggtggtct
gagaagaagaaagatgagctgctaaagttttgggaaaactatattttaattttggaaact
ctagaaggaaatcagatccacgttataaagccagttttaccaaagctaaacagtctgttt
gaatatgcagtgtcggaggaaaatgggtgctggctctttcacccctcctggcacatgtgc
atttataaaagaatgttcgaaagtgagaataaaatcctgaccagagaaggtgtcatccat
tttttggagctgtatgaaacaaggagtcttccttttgcaccagagttttctgagtttatt
attggaccattaatggattcactttcggagagctctctgtatagcaggtccccaggccag
ctgataggaagtggttctccactgggattgaaattacagaagtttttagtcacttatgtt
tctcttcttccagaagaaataaagagtagtttcctactaaagtttattcagaagatgaca
agcagacattggtgtgccattcccattttgtttctgtctaaggctttggcaaatgtccca
agatgtaaagccctgggtatagaagggcttcttgctctcagggacgttctgcagtgcaca
atgatcacccaccagatcctgctgagaggggccgcgcagtgctatcttcttcagacagcc
atgaatttagtagatgtggagaaggtgaccctttcagatgtttcaacttttctcatgtct
ctgagacaagaagagtccttaggacgaggaacctcattgtggacagagctctgtgattgg
ctgcgtgttaatgaaagctgttttgggcgagcctcagcctgtaatcccactggacttcca
gagacaccatctttaaatgcttacgtgaagaacctagttcaagagtatattacgtcacct
gctggggaaacaggagaagactgctttatgcctgactggtttgaagccaagctcgttgct
atgatggtcttgctggctatagatgtggaaggaatgaagacacagtacagtgaaaagagg
agaacacagaatgtattaaggatattcttagaccctctcctggactcccttctgaagttg
ggcaccaatgcctacatgcccgtgctgagagcggacagatgcctccagttgctgttgaag
ctactgcacacttgcatgttgacaggttccggtgcccgagatgatgaggtgttcacgctt
ctccagagctttgccatgtctgctaccgagagcgtttctgattttatcctccgacggctt
accatgaatgaactcagtagtgttttggatctggatcgttgccatttatacctgatggta
ttaactgagcttataaatatccatttgaaggttgggtggaaaagaggcaaccccatttgg
agagttatttctcctctgaaaaatgcatccatccggcatcttcaagatacagacagtgga
caggagccgacccttgccgggcagatccagagggtcgttagcatggctgccttggccatg
gtgtgtgaggctgttgaccaaaagccggaactgcagctcgactccctggagccgggaccc
acggaaaggttcctcgcctccctcccgctcaatcacatgctgcagaagccgcacccggag
gagcacagcagtttttctgaagactcggcagcttcccaaggatgggggaaagtagtcgca
caatatattcatgatcagtgggtctgcctctctttcttgttgagaaaataccacacccat
atcccgtcattggaaggtgacgttccggatcccgtcctgcctgctgttcagatgccagcg
aggaccctgcagtccgcgctgggagccctcacagtcctgccttcagaccaagtcttgcct
gtgttccactgcatgaaagttctggttcccaagcttttgacctcctctgaatcactctgt
gtagagtctattgacatggcttggaagattatatctgctttaagcaacactcagctgata
ttctggtctaatttaaaagcttttgttcagtttgtttttgataccaaagttcttaccatc
gctgcaaaaatcaagggccaggcgtacttcaagataaaagagattatgtacaagatgatt
gaaatgtctgctataaaaaccggagtcttcaatacactgataagttattgctgcaaatct
tggatagtttctgcttcagatgtgtcccaagtgtctttgtcaagtgctaaaaattatacc
gaacttatcctcgagggttgtgtatttggaactgtgtttaggcgtgatcaaagacttact
caggatgtgcagacctacatagaaaatcttggacacgattgtgcagcaaacacggttatt
gaaaatactaaaagagaagaccactatgtgagaatttgtgctgtcaaattcctgtgttta
ttacatggctcaaatatgtctcataagttgtttatggaagatcttgcaatcaagctatta
gataaagatgagtcggtgtccaagtccaggactcggtactatgtgaactcccagcagcac
cggctgaagaaccgggtgtggcagacgctgctggtgcttttccccagctttgatcagaat
ttcttgaatagaattattgacaagattttccaggctggtttcatcaataatcaagcatcc
ataaaatatttcatagaatggattattatattgattcttcataaatttcctcaatttctg
ctgaagttctgggattgcttttcttatggtgaagaaaaccttaaaacaagcatttgtaca
tttttatccgttttgtcacatttggacatcatcactcaaaacattccagaaaagaaacca
gtcctgaagcaagcccttgtcaccgtgctgcagtggtgtttcagtcacaacttcagcatc
cgactgtatgccttggctgccctgaagaaggtctggagcatgtgtaaggcgctgcgtgtg
gaagaacttgaggcgttgacgtctgtcattgaatccagtctcaaccaagtggaaaacatg
cccggaacagggaacgccaagaagaattggcagcgcatccaagagcatttcttttttgcc
cgtttccacccagttcgggattactgtctggagaccatattttacaaccttccacgcctt
tcaggcctggttgaagaagaatggattgccattggtaaatttaccagattcacagacatc
ccctcagatgcaggatttcagtggtacctttcaccgactcacctctgtgaattgaagccg
ggtgactgggctcagcaggacgtaggttctcacttgggcgaagcagatagccagtctgag
tggacggatgttcagaagaagattatcccctggaaaaataatgctccagatttagatctg
gagctagtatttcaggatcgagttgccaagcttggaaagtcaattagcagactgattgta
gtggcctcgctcattgataaaccaactaatttaggaggactgtgccggacctgcgaggtg
ttcggggcctcggccctcgtgctgggcagcctgcagtgcgtcagagacaagcagttccaa
ggcctcagcgtctccgcagagcagtggctgcctttagtggaggtaaaaccacctcagctc
atcgattttctgcaacagaaaaaaacagaaggttacactgtcattggtgtagaacaaact
gcgaagagtgtagacctgactcagtacagctttccggagagatctctgctcttgttggga
aatgaacgtgagggaattccggcaaatctaatccaacaattggatgtttgtgtggaaatt
cctcagcagggcattatccgctcgctgaacgtccacgtgagtggggctctgctcatctgg
gagtacaccagacagcagctgctccggcatgggggtgccgagtcatga
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integrated database retrieval system
