Mustela nigripes (black-footed ferret): 132021387
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Entry
132021387 CDS
T09425
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
132021387 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnp03021
]
132021387 (POLR1A)
Enzymes [BR:
mnp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
132021387 (POLR1A)
Transcription machinery [BR:
mnp03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
132021387 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
Motif
Other DBs
NCBI-GeneID:
132021387
NCBI-ProteinID:
XP_059261661
LinkDB
All DBs
Position
7:39892742..39963250
Genome browser
AA seq
1718 aa
AA seq
DB search
MLGSKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSVNGLYDLALGPADS
KEVCSTCVQDFNNCSGHLGHIDLPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIHLL
VCQLRVLEVGALQAVYELERILNRFLEENADPTAFEIQEELEQYTAKIVQNNMLGSHGAH
VKNVCESRSKLIAYFWKAHMTAKRCPHCKTGRSVVRKEHNSKLTVTYPAMVHKKAGQKDT
ESLGIEEAQMGKRGYLTPTSAQEHLTALWKNEGFFLNYLFSGLEDVDVESRFNPSMFFLD
FLVVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDMVLIRKLLALMAQEQELPCEVAAPAK
DEEKDSSIVLDRSFLSLLPGQSLTDKLYNIWIRLQSHVNIVFDSEMDKLMMEKYPGIRQI
LEKKDGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQEL
RQAVINGPNVHPGASMVINEDGSRTALSAVDLTQREAVAKQLLTPATGAPKPQGTKIVCR
HVKNGDILLLNRQPTLHRPSIQAHHARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTIRGCFFTREQYMELLYRG
LTDKVGRVKLFPPAILKPFPLWTGKQVVSTLLINIIPEDHIPLSLSGKAKISGKAWVQEP
PRPVPGFNPDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGKVLTC
LARLFTAYLQLYRGFTLGVEDILVKPKADAKRHRVIEESTHCGPRAVRAALNLPEATSCD
EVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENNLQMMVQS
GAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIK
PPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYG
EDGLDIPKTQFLQPKQFPFLASNYEVIMKSKHLQEVLSRADPQKALRHFRAIKKWQSKHP
NTLLRKGAFLSYSQKIQAAVKALNLEGGNQNGRSLGTHQILKMWNELDEQSRRKYQKKAA
PCPDPSLAVWRPDIYFASVSETFEKKMDDYSVEWASQAEKSYEKSELSLDRLRTLLQLKW
QRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIK
TPMMSVPVFNTKKALKRVKSLKKQLTRVCLGEVLEKIDVQESFCVGDKHDKFQVYRLRFH
FLPHAYYQQEKCLRPEDILHFMETRFFKILMESLRKKNNKASAFRTVNTRRATQRDLDNA
GESERSRGEQEGDEEEEGPIVDAEADEGDADASDAKRKEKQEEEVDYESEEEEVEEDNDD
EDVREEGHNSANGAHEAQEKDEEVGSGPEEDSPASAPLSRPRKSAHRREPQGAEAVERRV
RAVREAHSFIEDYEYDTEESLWCQVTVKLPLMKINFDMSSLVMSLAQNAVVYATKGITRC
LLNETTNKKNEKELVLNTEGINLPELFKYSEVLDLRRLYSNDIHAMASTYGIEAALRVIE
KEIRDVFAVYGIAIDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQFLK
QATLMGSHDELRSPSACLVVGKVVKGGTGLFELKQPLR
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atgttgggctcaaagaacatgccctggcggaggctgcagggcatttccttcgggatgtat
tcggcggaagaactcaagaaattaagtgttaagtccattacgaaccctcgttacctggac
agcctggggaacccatcggtgaatggcctgtacgatttagctttgggccctgcagattcc
aaagaggtgtgctccacctgcgtacaggacttcaacaactgctctggccacctgggccac
attgaccttccactcacggtgtacaaccctctcctcttcgataaactctacctgctgctc
cgaggctcctgtttaaactgtcacatgctgacctgcccccgtgctgtgattcacctctta
gtgtgccagctgcgagttctggaagtgggtgccctacaggcagtctatgagcttgagaga
attctgaacaggtttctagaagaaaatgctgatcctactgctttcgaaattcaggaagag
ttggaacagtacacggccaaaatcgtacagaacaatatgttgggatcccatggtgctcat
gtgaaaaatgtttgtgagagcaggagcaaactcattgcttacttctggaaggcacatatg
actgctaagcggtgtccccactgcaagaccgggcggtcagttgtccgaaaggagcacaac
agcaagctgacagtcacatacccagccatggtgcacaagaaggctggccagaaggacaca
gagtccctgggaattgaggaagctcagatgggaaaacgagggtacctgacacccaccagc
gcccaagaacatcttaccgccctttggaagaatgaaggattctttctgaattaccttttt
tcgggactggaagatgtcgatgtggagtctagattcaatcccagtatgttctttttggat
ttcctggtggtaccaccctcaaggtatcgccctgtcaatcggctgggggaccagatgttt
accaacggccagacggtgaacttgcaggctgtcatgaaggatatggttttgatccgaaaa
cttctggcactgatggcccaagaacaggagctgccgtgtgaggtggcagcacctgccaag
gatgaggaaaaagactcttctattgttctggaccgatcctttttgagtttgcttccaggc
cagtccctcacagacaaactttacaacatttggattcgtcttcagagccatgtaaatatt
gtgtttgatagtgagatggacaaattaatgatggaaaagtatcctggcatcagacagatc
ctggagaagaaggatggcttattccgaaagcacatgatggggaagcgagtagactacgcg
gcccgctcagtcatctgcccagacatgtacattaacaccaacgaaattggaattcccatg
gtgtttgccacaaaactgacctaccctcagccagtcaccccctggaatgttcaggaactg
aggcaagccgtcatcaatggccccaatgtgcacccaggagcctccatggtcatcaacgag
gacggcagccgcacagccctgagtgccgttgacctgacccagcgggaagccgtggccaaa
cagctcctgacaccagccacgggggcacctaagccccaggggacaaaaattgtgtgccgg
catgtgaagaatggggacatcctcctgctgaaccgacagcccaccctgcacagaccctct
atccaggcacaccatgcccgcatcctgccagaagagaaagtcctgcggctccactatgcc
aactgcaaggcgtataatgctgacttcgatggagacgagatgaatgcccacttcccccag
agtgaactgggccgggctgaggcctatgtcctggcctgcacagatcagcagtacctagtc
cccaaggatggccaaccattggcagggttgatccaagatcacatggtttcgggcgcaaac
atgaccattcgaggttgctttttcactcgggagcagtacatggagctgctataccgagga
ctcacagacaaggtggggcgtgtgaagctctttcctcctgccatcctgaagccctttcca
ctgtggacaggaaaacaggttgtgtcaacactgctcataaacataatcccagaagaccac
atcccactgagcttatcgggaaaggcgaagatcagtggcaaagcctgggtacaggagccc
cctcggcctgttcctggctttaaccctgactccatgtgcgagtcccaggtgatcatcaga
gaaggggagctgctgtgtggggtgctggacaaggcgcactacgggagctccgcctatggc
ctggtccactgctgctatgagatctatggtggggagaccagcggcaaggttctcacctgc
ctggcccgcctcttcactgcctacctgcagctctacagaggtttcaccttgggcgtggaa
gacattctggtgaagccaaaggcagatgcaaagagacacagggtcattgaagagtccacc
cactgcgggccacgggctgtcagggctgcgttaaacctgccagaagctacgtcatgtgat
gaggtccgagggaaatggcaggatgcccatctgggcaaagaccagagggattttaacatg
attgatctgaagttcaaggaggaagtgaaccattacagcaatgagattaacaaggcgtgc
atgccatttggcctgcacagacagttcccagagaacaatttgcagatgatggtgcagtct
ggagccaaagggtcgactgtgaacaccatgcagatctcatgcctgctgggccaaatcgaa
ttggaaggtcggagaccccctttaatggcatctggcaagtcactgccctgctttgagcct
tatgagttcacgcccagggccggcggtttcgtcactggcagattcctcactggcatcaag
cctccggagttcttcttccactgcatggctgggcgagaggggctagtggacactgctgtg
aaaaccagccgctccggctacctccaaaggtgcatcatcaagcacttggaggggctggtg
gtccagtatgatctgaccgtgcgtgacagtgatggcagcgtggtccagttcctgtacggg
gaggacggcctggatatccccaagacgcagttcctgcagcccaagcagttccccttcctc
gccagcaactacgaggtgataatgaaatcgaagcatctccaggaggttttatcccgagca
gatccccagaaagctctccgtcacttcagagccatcaaaaaatggcaaagcaaacatccc
aataccctgctgagaaaaggcgccttcttgagttattcacagaaaattcaagcagctgtg
aaagccttgaaccttgagggtgggaaccagaatggccgcagccttgggactcaccagatc
ttgaagatgtggaatgagttagatgagcagagtcggagaaaataccagaagaaggcagct
ccttgtcctgaccccagtctggctgtctggcgcccagacatctactttgcatcagtgtca
gaaacatttgaaaagaagatggatgactacagcgttgagtgggcatctcaagcagagaag
agttatgagaaatcagagctttctcttgacaggttgaggaccctgctgcagctgaagtgg
cagcgctcgctgtgtgacccgggtgaggccgtgggcctgctggccgcccagagcattggg
gagccctccacgcagatgaccctgaacactttccactttgcgggcagaggcgagatgaac
gttaccctgggcattccgaggttgagggagatcctcatggtggcgagtgccaacatcaag
acgcccatgatgagcgtgcccgtgttcaacaccaagaaagccctgaagagagtgaaaagc
ctgaagaagcagctcaccagagtgtgcttaggggaggtgttggagaaaattgatgtccag
gagtcgttctgtgtcggagacaaacacgacaagtttcaggtgtaccggctgcggtttcac
ttcctgccgcatgcgtactaccagcaggagaagtgcctgagacccgaggacatcctgcac
ttcatggaaactaggttctttaaaattctgatggaatccctcagaaagaagaataataaa
gcctccgctttcagaaccgttaacactcggagagccacccagcgggatctcgacaacgct
ggggagtcagagaggagtcggggagaacaggaaggtgatgaggaagaggagggccccatt
gtggatgctgaagctgacgagggagacgccgatgcttctgatgccaaacgcaaggagaag
caagaagaggaggtcgattatgagagcgaggaagaggaggtcgaggaggataatgatgat
gaggacgtgcgggaggaagggcacaactctgcgaacggtgctcacgaggcccaggagaag
gatgaagaggtgggctcaggccccgaggaggactcacctgcttccgcccccctcagccgg
ccccggaaatctgcccaccgcagggagccccagggagccgaggctgtggagcgccgggtg
cgggccgtgcgtgaggcccactcgttcatagaggactacgagtacgacactgaggagagc
ctgtggtgccaggtgacagtgaagctccctctgatgaagattaactttgacatgagctcc
ctggtcatgtccctggcccagaatgccgtcgtctacgcgaccaagggcatcacaaggtgt
ctcctgaatgaaaccaccaacaagaagaatgagaaagagcttgtgttaaacacagaagga
atcaatctgccggagctgttcaagtactcggaggttctggacttgcgccgcctctattcc
aatgacatccacgcgatggccagcacctatggcattgaggctgcactgcgggtgatcgag
aaggagatcagggacgtgtttgctgtgtatggcattgccattgatccccgccatctttcc
ctggtcgccgactatatgtgcttcgagggcgtttacaagccattgaatcgctttgggatc
cgttcaaactcctcccctctgcagcagatgacgtttgaaaccagcttccagttcctgaag
caggccaccttgatgggatcgcacgatgagctgaggtccccttctgcctgcctcgtcgtc
gggaaagtcgtcaagggcgggacaggcctgtttgagctcaagcagcccctgagatag
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integrated database retrieval system
