Macrobrachium nipponense (oriental river prawn): 135207993
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Entry
135207993 CDS
T09903
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mnz04040
]
135207993
Ion channels [BR:
mnz04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
135207993
BRITE hierarchy
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
Motif
Other DBs
NCBI-GeneID:
135207993
NCBI-ProteinID:
XP_064096149
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All DBs
Position
34:complement(26912610..26985696)
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AA seq
1190 aa
AA seq
DB search
MSSMPTALLRALTAWNRPRQRRSRETEAATSSSSYRFHYLQELLQTKKDPDSNGVPRGRV
TPEFSNDVCQMLESPYRILKMAAKGDESEIERLCVADRTRVQVQDSKGWNAVHHAAAHNQ
PLSVILLYNHGADINWQDTQGRTPLHTAVEKESIDAIDTLIHCNCDTKLVDSDGFSAFHR
AVLLNKLRCLETMQQHLDKVDLQQGDAQGRTALHLAAKFDYVDVAKLLLESYAIEHICPN
IPCMNGYSPIHIAARNASVGVLEAILKWGESRGCLKERMICLPDLEGNEPLHLAVHGGEI
KAIELCLKMGAIISKQQDDKSTPVHLACSQGSLDIVRLMFNLQPAEKSKVLEILDAQGMS
PLHCAAMFDHPELVSFLIDEGALVDQVDQDHRTALLLAASRSGWRTVDVLLAHGADPTIR
DLNCKNLLHVVIMSGGSLNDVLSLKQASNVEWWMPRLRAMLDEQDSMGWSPLHYASRGGQ
ITSLASLLSLGACVRTKDIRNESPLHFAAKYGRYNTVRQLLESSNGFLILNECNDEGKTA
LHIASEEGHTRVVQLLISKGALLHKDHFGRTPLHLAATGGHGQVIKTLLAVHSHILDQTD
KDGNTPLHMAVRANKPDVVTQLMSLNCKLLPDNNNCSPIDCAIMYKIAPCALALVSHERG
PAEILAVKSKIQGCISMALIRTLPKVFEAVLHQAVTKANVKEQSKDYFIKYSFYPLQLTN
EQTEAEKLRLKDPKLKPPPLYTCNEMVECGRLELLMHPLTQRYLDMKWQAYGKAVHMINL
FTYLVYLSLVTVMAVGVLGNKSLGDFTNFTTYEAFHTAEKFDWVQMKEPPGWMSFMAFAI
VFFAVLSMLKELFQMYHHGLKYLMAAINFVQWTTYLTSVCMVTPILMNREWGTDQLNSAA
LAVFTAWFSLLFYFQRFDYIGIYIVMFLEILNTLLKVLFVFSVLIVAFGLAFYILMSHGG
HLSFSNLPMSMLHTFSMMLGEIDFLNIFVYPFYEVSPRGDFLHYPGTTFGLLVIFMILMP
ILLMNLLIGLAVGDIESVKKNAQLKRIAMQVELHSDLESKLPEVIIKRVNKSELTIYPNR
SKCQKIVTRILGALLYSSPVDEKEVETLEMHKDDYLWEELECQQRRLHSISKELDKQTQL
LQLIMQKMEIQSEAEYDEGVCIEDISKTPLAPPKFCTAIASRSWNTKIDG
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccatgccgacggctctcctgagggcgctgaccgcctggaatcgcccccgacaa
cggcgtagcagggaaaccgaagctgctacctcctcctcctcctacaggtttcattacctg
caggagctcctgcaaaccaagaaagaccccgatagcaatggcgtgccacggggtcgggtc
acccccgaattctccaacgacgtctgccagatgctcgagagcccttaccgaattctcaag
atggcggccaagggggacgaatccgagatagagagactgtgcgtggcggatcgaacccgt
gtccaggtccaagacagcaaagggtggaacgcggtccaccacgcggctgcccacaaccaa
cccctttctgtcattctgctctacaatcatggcgccgatataaactggcaagatacccaa
ggtcgtacgccattgcacactgctgtggaaaaagagtcgatagatgccattgatactctt
attcattgtaactgtgacacaaagcttgttgacagtgacgggttctcggcattccacaga
gctgtccttttgaacaagttacgatgcctggagacgatgcagcaacacctggataaggtc
gacttacaacagggtgatgcccagggacgcactgcactccatctagcggcaaagtttgat
tacgtggatgtcgccaaacttttgcttgagagctatgccattgaacatatatgtccaaat
attccttgcatgaatggttattcccccatccacattgctgcccgaaatgcgtctgtaggt
gttctggaggctattttgaaatggggggaaagcagaggttgcctcaaggaaaggatgatc
tgtttgcctgatctggaaggaaatgaacctcttcatttggctgttcatggtggagagata
aaggccattgaactgtgtttgaagatgggggccatcatttcaaagcaacaggatgataaa
tcaacacctgttcatcttgcatgttctcaaggttcacttgacattgttaggctgatgttt
aatcttcaacctgctgaaaaatcaaaagttttggagatacttgatgctcagggtatgtct
ccactccattgtgcagccatgtttgaccacccagagttggtcagttttttgattgatgag
ggtgcattggtagatcaagttgaccaagaccacaggacagccttgttattagcagcttca
cgaagtggatggaggaccgtggatgtgcttttagcgcacggagcagatccaactattaga
gacttaaactgcaagaacttacttcatgttgtcattatgagtggaggttctttgaatgac
gtcctctcattgaaacaagccagtaatgttgagtggtggatgcctcgactaagagctatg
ctggatgagcaagattcaatgggatggtcacccttgcattatgcctctcgtggtggtcag
attacgtccctcgcttctcttttaagtctcggcgcctgcgttaggacgaaggacataagg
aacgaaagcccactgcactttgctgctaaatatggaaggtacaacactgtacgacagctg
cttgaatctagtaatggtttcctcattttgaatgaatgcaatgatgaaggcaagacagcc
ttacatattgcaagtgaagaaggccacacaagagttgtgcaacttctcatcagtaaagga
gcattgttgcacaaggatcattttggtcgcactccattgcacttggctgccacaggaggc
catggccaggttataaaaacactgctggctgttcatagtcatatattagaccagacggac
aaagatgggaacactcctttacatatggctgttcgagcaaataaaccagatgttgtaact
cagctgatgagtcttaattgtaagttgctccctgacaacaataactgcagtcccattgac
tgtgccattatgtacaagattgcaccttgtgcattggctcttgtttctcatgaaagaggg
ccagctgaaattttagcagttaagagcaagatccaaggttgtatcagcatggctttgatc
aggactctcccaaaagtgtttgaagctgtactccatcaggcagttaccaaagccaatgtc
aaagaacagtctaaggattactttattaagtacagtttctacccactgcagttgacaaat
gagcagactgaagcagaaaagctacgactcaaggaccccaaactgaagccacctcctttg
tatacttgcaatgaaatggttgaatgcggacgtttggagctgctgatgcatccactgaca
cagaggtatctggatatgaaatggcaggcttatgggaaagctgttcacatgatcaatcta
tttacatatttggtttacctatctttagtgacagtcatggctgttggagtgttagggaat
aagtctcttggtgatttcacaaattttacgacatatgaggcctttcacacagcagaaaag
tttgattgggttcagatgaaagaaccaccaggatggatgtctttcatggcgtttgctatc
gtgttttttgcagtgcttagtatgctcaaagaattattccaaatgtaccatcatggactt
aagtacctaatggcagccatcaattttgtgcagtggacaacatacttgacatcagtctgc
atggtgactccaatactcatgaatcgtgaatggggtactgaccagttaaattctgcagct
ttagcagtatttactgcttggtttagtcttctattttatttccaaaggttcgactatatt
ggaatctacatagtcatgttcctcgaaattctgaacactttgctaaaggtgctcttcgtg
ttctctgtccttattgtggcatttggtctggctttctacatcctcatgtctcatggaggt
catttgtccttctccaatttaccaatgtcaatgttacacactttctccatgatgttggga
gaaatagatttcctcaacatctttgtgtacccattttacgaagtaagtcctcgcggagat
tttcttcattacccagggacaacatttggccttcttgtaatctttatgatcctaatgcct
atcttgctgatgaacttactcattggtttggctgtgggggatattgagagtgtcaaaaaa
aatgcccagttgaagaggattgctatgcaggttgaattacactctgacttggaaagtaag
cttccagaggtgataattaaaagagttaataagagtgaacttacaatttacccaaatcgc
tcaaagtgccaaaaaatagtcactcgtatccttggtgctctgctgtattcatcccctgtg
gatgagaaagaagttgagactcttgaaatgcacaaggatgattacctgtgggaagagttg
gaatgtcagcaacggcgcctccacagtatttcaaaggaacttgataaacagactcaacta
ctccagctgattatgcagaaaatggagattcagagtgaggcagagtatgatgaaggagtt
tgtatagaagatatcagcaaaacacctcttgctcctccaaagttctgtacagcaatagct
tcaagatcatggaatacgaagattgatggttaa
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integrated database retrieval system
