Macrobrachium nipponense (oriental river prawn): 135216694
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Entry
135216694 CDS
T09903
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03020
RNA polymerase
mnz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
135216694
09124 Replication and repair
03420 Nucleotide excision repair
135216694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnz03021
]
135216694
03400 DNA repair and recombination proteins [BR:
mnz03400
]
135216694
Transcription machinery [BR:
mnz03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
135216694
DNA repair and recombination proteins [BR:
mnz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
135216694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
135216694
NCBI-ProteinID:
XP_064108188
LinkDB
All DBs
Position
6:99422049..99514842
Genome browser
AA seq
275 aa
AA seq
DB search
MPYANQPSLNLMELTEENIKFYIEDTDLSVANSIRRIFMAETPTIAIDWVQLEENSTVLS
DEFIAHRIGLIPFTSDERVEQMQYPRECSCTDYCSECGVLFTLDVKCLDDHTRQVTTADL
KSEDGRVIPVTSRHREDEASEYGESDDILIVKLRKGQSLKLKAYAVKGFGKEHAKWNPTS
SVAFEYDPDNALRHTLYPKPEEWPKSEYTVLDDNQYQADFDPTARPNKYYFNVESAGALK
PENIVMMGIAALKKKLSDLQNQLSMEAQSDALAIN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccgtatgctaatcaaccttctcttaacctcatggaattgactgaagaaaatatcaag
ttttatatcgaagacaccgatttaagtgttgcaaacagcattcgacggatattcatggca
gagactcccacaattgctattgactgggttcagttagaagagaattccactgttttgagt
gatgagtttattgcccatcgtataggtctcattccatttacttctgatgagcgagttgag
caaatgcagtatccaagagaatgttcatgcacagattactgtagtgaatgtggagtgtta
ttcacactagatgtcaagtgtttggatgatcacacacgccaggtaaccacagcagatcta
aagtctgaagatggacgtgtaattcctgtcacatcacgccatcgagaagatgaggccagc
gagtatggtgaatcagatgatattctcattgtcaaacttcgaaagggccaatcactcaag
ctaaaggcttatgctgtgaagggatttgggaaagaacatgccaagtggaatcccacttct
agtgtagcatttgaatatgatcctgacaatgccttgagacacacactgtatcccaaacca
gaggaatggcctaagagtgaatatactgtcttggatgataatcagtatcaagctgacttt
gacccaacagctaggccaaataagtattatttcaatgttgaatctgccggagccttgaaa
cctgagaatatagtcatgatggggattgctgctttaaagaaaaaactttcagatctccaa
aatcaacttagcatggaagcacaatcagatgctttggctataaactaa
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