Microtus oregoni (creeping vole): 121447169
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Entry
121447169 CDS
T08307
Symbol
Tarbp1
Name
(RefSeq) probable methyltransferase TARBP1 isoform X1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
morg
Microtus oregoni (creeping vole)
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
morg03016
]
121447169 (Tarbp1)
03036 Chromosome and associated proteins [BR:
morg03036
]
121447169 (Tarbp1)
Enzymes [BR:
morg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
121447169 (Tarbp1)
Transfer RNA biogenesis [BR:
morg03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
121447169 (Tarbp1)
Chromosome and associated proteins [BR:
morg03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
121447169 (Tarbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SpoU_methylase
IF5A-like_N
Motif
Other DBs
NCBI-GeneID:
121447169
NCBI-ProteinID:
XP_041506205
LinkDB
All DBs
Position
Unknown
AA seq
1580 aa
AA seq
DB search
MERVLADALLAQSREPCALLGALCGGEASAERAETLRLVLQRLEERGAGAGGLAEAAHEV
ARGHLVPWLHASPRGGPAGPRVLRAASAALRSCARLAGPELAVALAEEALRELPNVPAVE
LLAAVAPCLRALDDAPLLRRLARASVELALAGDAPPAVGARLLPALAQSAEPALRAAWDA
LASPGPGAEGRTGPELLVLSALAEKLLSARARHEDLDARLRGRFWRTVQAGLGCTQDALT
RKRARYLLQRAVQVSAELAMDCTCGPQDTMGPSLFWWSEKKKDELLKFWENYILIMEVLE
GNQIHVIKPVLPKLNSLFEYAVSEENGCWLVHPSWLVCIYTRMFESENKILTKEGVIHFL
ELYAVRSPPYSPELSEFITGPLMDALSESCLYSRSPGQLSGSGSPLGLKLQTFLVAYVSL
LPEEAKSRFLLKFIQRMADRHWCAVPVLFLSRALAGVPRCKALGGEGLLALRDILQRTMI
THQVLLRGAAQCYLLQTAMRLVDVEKVSLSDVSAFLVSLRQEESLARGTGLWTELCDWLR
INEKYFRQSSIGGSDGHETSLNAYVKILVQEFVKSPGWETGESGFMPDWFEARLTSLMVL
LAVDVEEMKTQFREKQRTQNVLRIFLDPLLDALGKLGTNAYMPLLRNDRCLQLLVRLLRS
SVPRGSSGQDDEVSTVLQTSILSTTESVAQFVLRRLTVNELQSVADLDRCQLYLTVLAEL
TSLQVKLGWKAGNPITRIISPLKNACIHHLQGAEDKQEPTLGRQVQRAVSMATLAALCEA
VDRHPVLQLESPDAEPMDRFLSALPLNQMLKKPHSEEQNSCVHPLENGSAFEESPSSQGW
GKTVAQYLHDQWVCLCWLLRKHRLLIPATESDTLECRLPAVQMPVQTLRSALDVLTVLPA
GHILPVFHCMEMLVPKLLTSDESLCIESFDLAWKTISSLSNTQLTFWPNLKAFVHFVFDN
EILTVAAELKGQAYFRIKEIMCKIIEMSSMKTGAFNILIRHCCQSWVAASSGVSQGSLSS
AKDYSELVLEACVFGTVFRRDQRLIQDVQTFIENLGPDCAANIIIEDTKREDYYVRICAV
KFLCLLDGSDVSHKLFIEDLAIRLLDKDESASKSRARYHENSLQHRVKNRVWQTLLVLFP
RFDQNFLNGIIDKIFHAGFTNNQASIKYFIEWIIILILHKFPQFLPKFWDCFSYGEEKLK
TSICTFLSVLSHLDIIIQNIPEKKLVLKQALTVALQWCLSHNFSVRLYALVALKKAWHLC
KALQFQECDAWTTVIECSLSQAESMHGAGNARKNWQRIQDHFFFSTFHPLKDYCLETIFY
TLPRLSGVTEEEWIALDKFASFTDIPSNEGSPWYRSETALSELSPGDWSQQDGGSILGEA
DSQSEWADVQKKIIPWGHKALESDLELLFQDRAAKLGKSISRLIVVASLIDKPTNLGGLC
RTCEVFGAAALVVGSLQCVGDRQFQHLSVSAEQWLPLLEVRPAQLTDYLQQKKAEGYTVI
GVEQTAQSSDLAQFCFPEKSLLLLGNEREGIPADLIQQLDVCVEIPQQGIIRSLNVHVSG
ALLIWEYTRQQLLGCVGPAS
NT seq
4743 nt
NT seq
+upstream
nt +downstream
nt
atggagcgggtgttggcggacgcgcttctggcgcagagccgggagccctgcgcgctgctg
ggggcactgtgcggcggggaggcgagtgcggagcgggcggagactctgcgcctggtgctg
caacggctggaggagcgcggcgcgggcgccggcgggctggccgaggcggcgcacgaggtg
gccaggggccacctggtgccctggctgcacgcgtccccccgtggagggcccgcggggccg
cgcgtgctccgggcggctagcgcggcgctgcggtcgtgcgcgcgcctggcagggcccgaa
ctggcagtggcgctggccgaggaggcgctgcgcgagcttccgaacgtgccggccgtggag
cttctggccgccgtggcgccgtgtctgcgcgccctcgatgatgccccgctgctgcgtcgc
ctggcgcgcgcgtccgtggagctggcgctggccggggacgcgccgccggcggtgggcgcg
cgcctgctgcccgcgctggcacagagtgcagaaccggcgttgcgcgcggcttgggacgcg
ctggcttccccgggacccggagctgagggccgcactgggccagagctgctggtgctgagc
gcgctggccgagaaactactgtcggctcgtgcgcgccatgaggacctcgacgcgcgcctc
cgcggccgcttctggagaaccgtgcaggctggactgggctgcacacaggacgcgctcacg
cgcaagcgcgcgcgctacctgctgcagagggctgtgcaggtgtctgcagagctggcgatg
gactgtacctgcggtccccaggacacaatgggtccaagcctattctggtggtctgagaag
aaaaaagacgagcttctaaagttctgggaaaactatatcttgatcatggaagtcctagaa
ggaaatcagatacatgtcataaagccagtcttacccaagctaaacagtctgtttgaatac
gcagtatcagaggaaaatggctgctggctcgttcatccctcctggctcgtgtgcatttat
acaagaatgtttgaaagcgagaataaaatcctgaccaaagaaggtgtgatccacttcttg
gagctgtatgccgtgagatcgcctccgtattcaccggaactctccgagtttatcactggc
ccgctgatggatgccctctcagagagctgtctgtacagcagatccccagggcaactgtcg
ggaagtggctctcccctgggattaaagctgcagacgtttctggtcgcttacgtttctctt
cttccagaagaagcaaagagtcgtttcctgttgaagttcatccagaggatggcagataga
cactggtgtgcggtgccagtgttgttcctctccagggctttggcaggtgtgcccagatgt
aaggccctgggtggagaagggcttctagccctcagggacattctccagcgcaccatgatc
acacaccaggtcctcctgaggggggcagcacagtgctatcttctgcagacagccatgcgt
ctggtggacgtggagaaagtgtctctttctgatgtctccgcctttctggtgtctctgagg
caagaggagtccttggcacgagggactggattgtggacagagctctgtgactggctgcgc
atcaatgaaaaatacttcagacagtcctcgattggtggctctgatggacacgagacatcg
ctaaatgcttacgtgaaaatcctagttcaggagttcgtgaagtctcctggttgggaaaca
ggagaaagcggcttcatgccagactggtttgaagccaggctgacctctctgatggttctg
ctggctgtggacgtggaagaaatgaagacccaattcagggaaaagcagaggactcagaat
gtgctgcggatcttcttagaccccctgctggatgctctggggaagctgggcaccaacgcc
tacatgcccttgctgaggaatgacaggtgcctccagctgctggtgaggttgctgcgttct
tctgtgccaagaggttccagtggccaggatgatgaggtgtccaccgtcctccagacctcc
atcctgtctactaccgagagcgtggctcagtttgtgctcaggagactcaccgtgaacgag
ctacagagtgtggcagatctggaccgctgccagttatacctgacggtgttggctgagctt
acgagtctccaggtgaagctgggctggaaagcaggcaaccccatcacccgaatcatctct
cctttgaaaaacgcatgcattcaccatctgcagggggctgaggacaaacaggaaccaacc
ctgggccgtcaggtgcagagagcggtcagcatggctaccctggcagctctgtgtgaggct
gtggaccggcacccagtgctgcagctggagtctcctgatgctgagcccatggacaggttc
ctgtcagctcttccactcaatcagatgctgaagaagccccactcagaggagcagaacagc
tgtgtgcatcccttggagaacggcagtgcttttgaagaatcaccatcttctcaaggatgg
gggaaaacagtggcccagtatctgcacgatcagtgggtctgcctctgctggctgctgagg
aaacaccgcctccttatcccagccacggaaagtgacacgctggagtgccgtctccctgct
gtccagatgcctgtgcagaccctgcggtcggccctggatgtcctcaccgtgctccctgcc
ggccacatcttacctgtgttccactgcatggagatgctggttcccaagctcctgacttcc
gacgagtcgctctgcatagaatcttttgacctggcctggaaaacgatatcttccctgagc
aacacccagctgacgttctggcctaacttaaaagctttcgtccactttgttttcgataat
gaaattcttaccgttgctgcagaactcaagggccaggcatacttcaggatcaaggagatt
atgtgcaagattatcgaaatgtcctccatgaaaacaggggccttcaacattctgatccgt
cattgctgccagtcttgggtagcagcttcttctggggtgtcccagggctcactctccagt
gctaaggattacagtgaacttgtcctggaggcttgtgtgtttggaacagtgtttaggcgc
gatcagagacttattcaggatgtccaaaccttcatagaaaaccttggacccgactgtgcg
gcaaacatcatcatagaggatactaagagagaagattattatgtgcgaatctgtgctgtc
aagtttttgtgtctgctagatggctccgacgtgtcccacaagttgtttatagaagatctt
gccatcagactcctggataaggatgagtccgcatccaaatccagagctcgctaccatgag
aactccctccagcaccgggtgaagaaccgggtgtggcagacgctgcttgtcctgttcccc
agatttgatcagaacttcttgaatggaattattgataagattttccatgctggcttcacc
aacaatcaagcatctataaaatattttattgagtggattattatattgattcttcataaa
ttccctcagtttcttccaaagttctgggactgtttttcttatggtgaagaaaaacttaaa
acaagcatttgtacatttttatctgttttatcacatttggacatcatcattcagaatatt
ccggaaaagaagctggttctgaagcaggccctcaccgttgccctgcagtggtgtctgagc
cacaacttcagcgtccgactctacgctctggtggccctcaagaaggcctggcacctgtgt
aaagccctgcagttccaagagtgtgatgcctggaccacagtcattgagtgcagcctcagc
caggcggaaagcatgcacggagcagggaatgccaggaagaactggcagcgcatccaggac
catttcttcttctccacgttccaccccctgaaggactactgtctggagaccatattttac
accctcccacggctctcgggtgtcactgaagaggagtggattgccctggataaatttgcc
agcttcacagacatcccttccaatgaagggtccccatggtacagatctgaaaccgcactg
agtgagctgagtcccggagactggtcccagcaggacggagggtctatcttgggtgaagca
gacagccaatcagagtgggcagatgtccagaagaagatcatcccgtggggacacaaggct
ctggagtcagaccttgagcttctgtttcaggatcgggccgccaagctcggcaagtccatc
agcagactcatcgttgtggcctcgctcatcgacaagccaaccaacttaggagggctgtgc
cgcacctgtgaggtgtttggagctgcggcactcgtggtcggcagtcttcagtgtgtgggc
gacaggcagttccagcacctcagtgtctctgcggagcagtggctccctctgctggaggtg
agaccggcgcagctgacagattatctgcagcagaaaaaggcggaaggctacactgtcatc
ggtgtggagcagacagcgcagagctcagacctggcccagttctgcttccctgagaagtcg
ctgctcctgttgggaaatgagcgggaagggatcccagccgacctgatccagcagctggac
gtgtgtgtggagattcctcagcagggcatcatccgctcactgaacgtgcacgtgagcggg
gctctactcatctgggagtacaccaggcagcagctgctcgggtgtgtggggcctgcatcc
tga
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integrated database retrieval system
