Mus pahari (shrew mouse): 110313945
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Entry
110313945 CDS
T05929
Symbol
Trmt2b
Name
(RefSeq) tRNA (uracil(54)-C(5))-methyltransferase homolog isoform X1
KO
K15331
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mpah03016
]
110313945 (Trmt2b)
Enzymes [BR:
mpah01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
110313945 (Trmt2b)
Transfer RNA biogenesis [BR:
mpah03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
110313945 (Trmt2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_31
Methyltransf_25
tRNA_U5-meth_tr
MTS
Methyltransf_11
Methyltransf_4
Methyltransf_12
Methyltransf_32
PrmA
Ubie_methyltran
Cons_hypoth95
Methyltransf_15
Methyltransf_23
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
110313945
NCBI-ProteinID:
XP_021044069
Ensembl:
MGP_PahariEiJ_G0031927
LinkDB
All DBs
Position
X:complement(113295746..113349869)
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AA seq
495 aa
AA seq
DB search
MHNPRLFLSRAAFFSKPGLLPWDTARPPDLSQSLLGRAYKGGFTSVIGKKHPSIQTYQRK
QRHCRARDDSWQERLADVVTPLWRLSYEAQLKVKFEAQKKLLQSLESHLQVLHGVSDTVA
APQSEGLRCLLHPIIPSPTTTGYRNKSTFSVNRSPDGNPKTVGYYLGTWKDGNVVCVPCS
HLKNIPEKHSQVAQYYEVFLRQSSVEPCLLFHEGGHWRELIVRTNRQGHTMAIVTFHPQG
LSEEELCVQKVTLKDFFTKGPGAACELTSLYFQESTMTRCSHQQSPYQLLFGEPHIFEDL
LGLKIRISPDAFFQINTGGAEMLYRTIGELSGVNSESLLLDICCGTGVIGLSLARRASQV
HGIELVEQAVEDARWTAAFNGVTNCEFHAGRAETILPQLLKSQNDEKLTVAVVNPARAGL
HYRVVQAIRNCRAIHTLVFVSCKPHGESTRNFIELCCPANSAKKLLGEPFVLREAVPVDL
FPHTPHCELVLLFTR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcacaacccaagattattcctttccagagcggctttcttctccaaaccaggactgctt
ccctgggatactgcaaggccaccagatttgtcacagtccttattgggcagagcatataaa
gggggtttcaccagcgtgataggtaagaagcatccaagcatacaaacatatcagaggaaa
caaaggcattgtagagcacgagatgactcctggcaggagaggctggctgatgttgtgact
ccactctggaggctgagttatgaagcacaactcaaggtgaaatttgaagctcagaagaaa
cttttacaaagcctagagtctcacctacaagtgctccatggagtcagtgacacggtggct
gcaccccagtctgaggggctccgctgtctcctccatcccattataccctcccctaccacc
actggctaccggaacaagtccaccttttccgtgaaccggagccccgatggcaatccgaag
accgtgggctattacctaggtacttggaaagatggaaatgtcgtctgtgtaccatgtagt
catctgaaaaacatcccagagaaacacagtcaagtggctcagtactatgaagtattcctt
cgacagtcttcagtggaaccgtgccttctctttcatgaaggtggacactggcgtgagctc
atagttcgtaccaatagacaaggacacacaatggctattgtcacttttcatccccaggga
ttaagtgaggaggaactctgtgttcagaaggtgaccttaaaggattttttcactaaaggc
cctggagcggcctgtgaactgacctcactctatttccaggaaagcaccatgacccgttgc
agccatcagcagtccccctaccagctcttgtttggggagccccacatctttgaggatctt
ctgggtttgaagattcgaatctccccagatgccttcttccagattaatactgggggggca
gagatgctgtatcggaccatcggggagctgagcggagtgaactctgagagcctcctccta
gacatttgctgtggcacgggtgtgattggcctctctctggctcggcgtgcctcccaggtt
catggcattgagctggtggagcaggcagtagaggatgccaggtggactgcagccttcaat
ggtgtcaccaactgtgagtttcatgctggcagagctgagacgattttgccacagctgtta
aagtcacagaacgatgagaagttgactgttgctgtggtgaaccctgcccgagctggactg
cattacagagtggtgcaagccattcggaactgcagggccatccacactctagtgtttgtt
tcctgcaagccccatggtgaaagcacaaggaacttcattgaactatgctgtcctgcaaac
tctgcaaagaagcttctaggcgagccttttgtcctgagagaagctgtacctgtggattta
tttccccacaccccacactgtgagctggtactcctcttcactcggtaa
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