Mus pahari (shrew mouse): 110317139
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Entry
110317139 CDS
T05929
Symbol
Cd4
Name
(RefSeq) T-cell surface glycoprotein CD4 isoform X1
KO
K06454
T-cell surface glycoprotein CD4
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03250
Viral life cycle - HIV-1
mpah03260
Virion - Human immunodeficiency virus
mpah04060
Cytokine-cytokine receptor interaction
mpah04514
Cell adhesion molecules
mpah04612
Antigen processing and presentation
mpah04640
Hematopoietic cell lineage
mpah04658
Th1 and Th2 cell differentiation
mpah04659
Th17 cell differentiation
mpah04660
T cell receptor signaling pathway
mpah05135
Yersinia infection
mpah05166
Human T-cell leukemia virus 1 infection
mpah05170
Human immunodeficiency virus 1 infection
mpah05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
mpah05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110317139 (Cd4)
03260 Virion - Human immunodeficiency virus
110317139 (Cd4)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
110317139 (Cd4)
04514 Cell adhesion molecules
110317139 (Cd4)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
110317139 (Cd4)
04612 Antigen processing and presentation
110317139 (Cd4)
04660 T cell receptor signaling pathway
110317139 (Cd4)
04658 Th1 and Th2 cell differentiation
110317139 (Cd4)
04659 Th17 cell differentiation
110317139 (Cd4)
09160 Human Diseases
09161 Cancer: overview
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
110317139 (Cd4)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
110317139 (Cd4)
05170 Human immunodeficiency virus 1 infection
110317139 (Cd4)
09171 Infectious disease: bacterial
05135 Yersinia infection
110317139 (Cd4)
09163 Immune disease
05340 Primary immunodeficiency
110317139 (Cd4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
mpah04090
]
110317139 (Cd4)
CD molecules [BR:
mpah04090
]
Proteins
110317139 (Cd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD4-extracel
C2-set
ig
Tcell_CD4_C
V-set
Ig_3
I-set
Ig_2
Receptor_2B4
Motif
Other DBs
NCBI-GeneID:
110317139
NCBI-ProteinID:
XP_021047194
Ensembl:
MGP_PahariEiJ_G0022619
LinkDB
All DBs
Position
2:complement(139987141..140011391)
Genome browser
AA seq
459 aa
AA seq
DB search
MCRDISLRHLLLLLLQLSQLLAVTQGKTVVLGKEGASAELPCESSQKKITVFNWKLSDQR
KILGRQNNGVLIKGGSLLGFERFDSKKSAWEKGSFPLIINKLKMEDSQTYICEVENRKEE
VELRVYKVTFSPGTTLLQGQSLTLTLDINSKVSNPLIECKHKTGKIVKGSQVLSISNLRV
QDSDFWNCTVTLDQKKNWFGMTLSVLGFQSTSITAYKSEGESAEFSFPLNFAEESVKRGE
LVWKEEKAFFFRSWISFSIKNRAVSVEMSTKDLKLQLEKTLPLTLKIPQVSLQFAGSGNL
SLTLDKGTLHQEVNLVVMKVAQINNSLTCEVMGPTSPKMRLTLKQENQEARVSEKQKMVQ
VKAPETGMWQCLLSEGEKVQLDSRIQVLSRRVMNQTVLLAGVLGGALGFLAFLGLCIPCC
VKCRKQQRQAARMSQIKRLLSEKKTCQCPHRMQKTHNLI
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtgccgagacatctctcttaggcacttgctgctgttgctgctgcagctgtcacaactc
ctagctgtcactcaagggaagaccgtggtgctggggaaagaaggggcatcagctgaactg
ccctgtgagagctcccagaagaagattacagtcttcaactggaagctctctgaccagaga
aagattctgggacgtcagaacaatggtgtattgattaaaggaggttcacttctggggttt
gaacgttttgattccaaaaaaagcgcatgggagaaaggatcgtttcctctcatcatcaat
aaacttaagatggaagactctcagacttatatctgcgaggtggagaacaggaaagaggag
gtggagttgcgggtgtacaaagtgaccttcagtccgggtaccaccctgttgcaagggcag
agcctgaccctgaccttggatatcaactctaaggtctctaaccccttgatagagtgcaaa
cacaaaacgggtaaaattgtcaagggttcccaagttctctccatatccaacctaagggtt
caggacagcgacttctggaactgcaccgtgaccctggaccagaaaaagaactggtttggc
atgacgctctcagtgctgggttttcagagcacatctatcacggcctataagagtgagggg
gagtcagcggagttctccttcccactcaactttgcagaggaaagcgtgaagagaggagag
ctggtgtggaaggaagagaaggcatttttcttccggtcctggatctccttctccataaag
aacagagccgtgtctgtagaaatgtccaccaaggacctcaagctccagctggagaaaacg
ctcccacttacactcaagataccccaggtctcgcttcagtttgctggctctggcaacctg
tctctgactctggacaaagggacactgcatcaggaagtgaacctggtggtgatgaaagtg
gctcagatcaacaacagtctgacctgtgaggtgatgggacctacctctcccaagatgaga
ctgaccctgaagcaggagaaccaggaggccagggtctctgagaagcagaaaatggttcaa
gtgaaggcccctgagacaggaatgtggcaatgtctactgagtgaaggtgaaaaggtccag
ctggactccaggatccaggttttatccagaagggtgatgaaccagacagtgctcctggct
ggcgtgctggggggcgccttgggctttctggctttccttgggctctgcatcccctgctgt
gtcaagtgccggaaacaacagcgccaggcagcacggatgtctcagatcaagaggctcctc
agtgagaagaagacctgccagtgcccccaccggatgcagaagacccataatctcatctga
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