Mus pahari (shrew mouse): 110318758
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Entry
110318758 CDS
T05929
Symbol
Notch1
Name
(RefSeq) neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah01522
Endocrine resistance
mpah04330
Notch signaling pathway
mpah04658
Th1 and Th2 cell differentiation
mpah04919
Thyroid hormone signaling pathway
mpah05020
Prion disease
mpah05165
Human papillomavirus infection
mpah05200
Pathways in cancer
mpah05206
MicroRNAs in cancer
mpah05224
Breast cancer
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
110318758 (Notch1)
09150 Organismal Systems
09151 Immune system
04658 Th1 and Th2 cell differentiation
110318758 (Notch1)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
110318758 (Notch1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110318758 (Notch1)
05206 MicroRNAs in cancer
110318758 (Notch1)
09162 Cancer: specific types
05224 Breast cancer
110318758 (Notch1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
110318758 (Notch1)
09164 Neurodegenerative disease
05020 Prion disease
110318758 (Notch1)
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
110318758 (Notch1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
EGF_2
Ank_2
Ank
NOD
Notch
NODP
Ank_4
Ank_5
Ank_3
EGF_3
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
110318758
NCBI-ProteinID:
XP_021049671
Ensembl:
MGP_PahariEiJ_G0024775
LinkDB
All DBs
Position
3:complement(13615918..13661734)
Genome browser
AA seq
2531 aa
AA seq
DB search
MPRLLTPLLCLTLLPALAAKGLRCSQPSGTCLNGGRCEVANGTEACVCSGAFVGQRCQDP
NPCLSTPCKNAGTCHVVDHSGTVDYACSCPLGFSGPLCLTPLDNACLANPCRNGGTCDLL
TLTEYKCRCPPGWSGKSCQQADPCASNPCANGGQCLPFESSYICGCPPGFHGPTCRQDVN
ECSQNPGLCRHGGTCHNEIGSYRCACRATHTGPHCELPYVPCSPSPCQNGGTCRPTGDTT
HECACLPGFAGQNCEENVDDCPGNNCKNGGACVDGVNTYNCRCPPEWTGQYCTEDVDECQ
LMPNACQNGGTCHNTHGGYNCVCVNGWTGEDCSENIDDCASAACFQGATCHDRVASFYCE
CPHGRTGLLCHLNDACISNPCNEGSNCDTNPVNGKAICTCPSGYTGPACSQDVDECALGA
NPCEHAGKCLNTLGSFECQCLQGYTGPRCEIDVNECISNPCQNDATCLDQIGEFQCICMP
GYEGVYCEINTDECASSPCLHNGRCMDKINEFLCQCPKGFSGHLCQYDVDECASTPCKNG
AKCLDGPNTYTCVCTEGYTGTHCEVDIDECDPDPCHYGSCKDGVATFTCLCQPGYTGHHC
ETNINECHSQPCRHGGTCQDRDNSYLCLCLKGTTGPNCEINLDDCASNPCDSGTCLDKID
GYECACEPGYTGSMCNVNIDECAGSPCHNGGTCEDGIAGFTCRCPEGYHDPTCLSEVNEC
NSNPCIHGACRDGLNGYKCDCAPGWSGTNCDINNNECESNPCVNGGTCKDMTSGYVCTCR
EGFSGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCPLPYTGATCEVVLAPCATSPCKN
SGVCKESEDYESFSCVCPTGWQGQTCEIDINECVKSPCRHGASCQNTNGSYRCLCQAGYT
GRNCESDIDDCRPNPCHNGGSCTDGINTAFCDCLPGFQGAFCEEDINECASNPCRNGANC
TDCVDSYTCTCPAGFNGIHCENNTPDCTESSCFNGGTCVDGINSFTCLCPPGFTGSYCQY
DVNECDSRPCLHGGTCQDSYGTYKCTCPQGYTGLNCQNLVRWCDSAPCKNGGRCSQNNTQ
YHCKCRSGWTGFNCDVLSVSCEVAAQKRGIDVTLLCQHGGLCVDEGDKHYCHCQAGYTGS
YCEDEVDECSPNPCQNGATCTDYLGGFSCKCVAGYHGSNCSEEINECLSQPCQNGGTCID
LTNTYKCSCPRGTQGVHCEINVDDCHPPLDPASRSPKCFNNGTCVDQVGGYTCSCPPGFV
GERCEGDVNECLSNPCDPRGTQNCVQRVNDFHCECRAGHTGRRCESVINGCRGKPCKNGG
VCAVASNTARGFICRCPAGFEGATCENDARTCGSLRCLNGGTCISGPRSPTCLCLGSFTG
PECQFPASSPCVGSNPCYNQGTCEPTSENPFYRCLCPAKFNGLLCHILDYSFTGGAGRDI
PPPQIEEACELPECQVDAGNKVCNLQCNNHACGWDGGDCSLNFNDPWKNCTQSLQCWKYF
SDGHCDSQCNSAGCLFDGFDCQLTEGQCNPLYDQYCKDHFSDGHCDQGCNSAECEWDGLD
CAEHVPERLAAGTLVLVVLLPPDQLRNNSFHFLRELSHVLHTNVVFKRDAQGQQMIFPYY
GHEEELRKHPIKRSTVGWATSSLLPGTNGGRQRRELDPMDIRGSIVYLEIDNRQCVQSSS
QCFQSATDVAAFLGALASLGSLNIPYKIEAVKSEPVEPPLPSQLHLMYVAAAAFVLLFFV
GCGVLLSRKRRRQHGQLWFPEGFKVSEASKKKRREPLGEDSVGLKPLKNASDGALMDDNQ
NEWGDEDLETKKFRFEEPVVLPDLNDQTDHRQWTQQHLDAADLRMSAMAPTPPQGEVDAD
CMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGET
ALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILLRNRATDLDA
RMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVLLLKN
GANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIV
RLLDEYNLVRSPQLHGTALGGTPTLSPTLCSPNGYLGNLKSATQGKKARKPSTKGLACGS
KEAKDLKARRKKSQDGKGCLLDSSSMLSPVDSLESPHGYLSDVASPPLLPSPFQQSPSMP
LSHLPGMPDTHLGMSHLNVAAKPEMAALAGGGRLAFEPPPPRLSHLPVASSASTVLSTNG
TGAMNFTVGAPASLNGQCEWLPRLQNGMVPGQYNPLRPGVTPGTLSTQAAGLQHSMMGPL
HSSLSTNALSPIIYQGLPNTRLATQPHLVQTQQVQPQNLQIQPQNLQPPSQPHLSVSSAA
NGPLGRSFLSGEPSQADVQPLGPSSLPVHTILPQESQALPTSLPSSMVPPMTTTQFLTPP
SQHSYSSSPVDNTPSHQLQVPEHPFLTPSPESPDQWSSSSPHSNISDWSEGISSPPTSMP
SQITHIPEAFK
NT seq
7596 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggctcctgacgcccttgctctgcctaacgctgctgcccgcgctcgccgcaaaa
ggcttgagatgctcccagccaagtgggacctgcctgaatggagggaggtgcgaagtggcc
aacggcactgaagcctgtgtctgcagcggggcctttgtgggccaacgatgccaggacccc
aatccttgcctcagcacgccgtgtaagaatgctggaacgtgccacgttgtggaccacagc
ggcactgtggattatgcctgcagctgtcccctgggtttctctgggcccctctgcctcaca
cctctggacaacgcctgcctggccaacccctgccgcaacgggggcacctgtgacctgctc
actctcacagagtacaagtgccgctgcccaccagggtggtcaggaaaatcatgtcagcag
gctgacccctgtgcctccaacccctgtgccaatggtggccagtgcctgccctttgagtct
tcatacatctgtggctgcccgcctggcttccatggccccacctgcaggcaagatgttaac
gagtgcagccagaaccctgggctgtgccgccatggaggcacctgccacaatgagatcggc
tcctatcgctgtgcctgccgtgccacccataccggtccccactgtgaactgccctacgtg
ccctgcagcccctcgccctgccagaatgggggcacctgccgccctacgggggacaccacc
cacgagtgtgcctgcctgccaggttttgctggacagaattgtgaagaaaatgtagatgac
tgtccaggaaacaactgcaagaatgggggtgcctgtgtggacggcgtgaatacctacaat
tgccgctgcccaccggagtggacgggtcagtactgtacagaggatgtggacgaatgtcag
ctcatgcccaacgcctgccagaatggcggaacctgccacaacacccacggtggctacaac
tgtgtgtgtgtcaatgggtggactggcgaggactgcagtgagaacattgatgactgtgcc
agtgctgcctgtttccagggtgcaacttgccatgaccgtgtggcttccttctactgcgag
tgtccgcatggacgcacaggtctgctgtgccacctcaacgatgcatgcatcagcaacccc
tgcaacgagggctccaactgtgacaccaaccctgtcaacggcaaggccatctgtacctgc
ccctcggggtacacggggccagcctgcagccaggatgtggatgagtgtgctctgggtgcc
aacccttgtgagcacgcaggcaagtgcctcaacacactgggttcttttgagtgccagtgt
ctacagggctacacaggaccccgctgtgagattgatgtcaatgagtgcatctccaacccg
tgtcagaatgatgccacttgtctggaccagattggggagttccaatgcatatgtatgcca
ggttatgaaggtgtatactgtgagatcaacacggacgagtgtgccagcagcccctgtttg
cacaatggccgctgcatggacaagatcaatgagttcctgtgtcagtgccccaaaggcttc
agcgggcacctgtgccagtatgatgtggatgagtgtgccagcacaccatgcaagaatggt
gccaagtgcctggatgggcccaacacctacacctgcgtgtgtacagaaggctacacaggg
acacactgcgaggtggacattgacgagtgtgaccctgacccctgtcactatggttcctgc
aaggatggtgtggccacctttacctgcctgtgccagccaggctacacaggccatcactgt
gagaccaacattaatgagtgccacagccaaccgtgccgccatgggggcacctgccaggac
cgtgacaactcctacctctgcttatgcctcaagggaaccacaggacccaactgtgagatc
aacctggatgactgcgccagcaacccctgtgactctggcacctgtctggacaagattgat
ggctatgagtgtgcctgcgaaccaggctacacaggaagcatgtgtaatgtcaacattgac
gaatgtgcgggcagcccctgccacaacgggggcacttgtgaagatggcattgcgggcttc
acttgccgctgccccgagggctaccatgaccccacgtgcctgtctgaggtcaacgagtgc
aacagtaacccctgcatccatggagcttgccgggatggcctcaatgggtacaagtgtgac
tgtgcccctgggtggagtggaacaaactgtgacatcaacaacaacgagtgtgagtccaac
ccttgtgtcaacggtggcacctgcaaggacatgaccagtggctacgtatgcacctgccga
gaaggcttcagtggccctaactgccagaccaacatcaacgaatgcgcctccaacccctgc
ctgaaccaggggacctgcattgatgatgtcgctgggtacaagtgcaactgtcctctgccg
tatacaggagccacgtgtgaggtggtgttggccccatgtgccaccagcccctgcaaaaac
agcggggtatgcaaggagtctgaggactacgagagtttttcttgtgtctgtcccacaggc
tggcaaggtcaaacctgcgagattgacatcaatgagtgtgtgaaaagcccatgtcgccat
ggggcctcctgccaaaacaccaatggcagctaccgctgcctctgccaggctggctacacg
ggtcgcaactgtgagagtgacatcgatgactgccgacccaacccgtgtcacaatgggggt
tcctgcactgatggcatcaacacagccttctgcgactgcctgcccggcttccaaggtgcc
ttctgtgaggaggacatcaacgaatgtgccagcaatccctgccgaaacggtgccaactgc
accgactgtgtggacagctacacgtgcacctgccccgcgggcttcaatggtattcactgc
gagaacaacacacctgactgtactgagagctcctgcttcaatggtggcacctgtgtggat
ggcatcaactccttcacctgtctgtgtccgcctggcttcacgggcagctactgccagtat
gatgtcaatgagtgtgactcacggccctgtctgcacggtggtacctgccaagatagctat
ggtacctataagtgtacctgcccacagggctacactggtctcaactgccagaaccttgtg
cggtggtgcgactcggctccttgcaagaacggtggcaggtgctcgcagaacaacacacag
taccactgtaagtgccgcagcggctggactggcttcaactgcgacgtgctcagtgtgtcc
tgcgaggtggctgcacagaagcgaggcatcgatgtcactctcctatgccagcatggaggg
ctctgtgtggatgagggagataaacattactgccactgccaggcaggctacacgggcagc
tactgtgaggacgaggtggatgagtgctcgcctaacccctgccagaacggagctacctgc
accgactatctcgggggcttttcctgcaagtgtgtggctggctaccatgggtctaactgc
tccgaggagatcaacgagtgcctgtcccagccctgccagaatgggggtacctgtattgat
ctgaccaacacctacaagtgttcctgcccccggggcacacagggtgtacactgcgagatc
aatgttgatgactgccatcccccccttgaccctgcctcccgaagccccaagtgcttcaac
aatggcacctgtgtggaccaggtgggtggctatacctgcagctgcccaccaggcttcgtc
ggggagcggtgtgagggtgatgtcaatgagtgtctctccaacccctgcgacccacgtggc
acccagaactgcgtgcagcgtgttaatgacttccactgcgagtgccgggctggccacact
ggacgccgctgtgagtcagtcatcaacggatgcaggggcaaaccgtgcaagaatggtggt
gtttgtgccgtggcctccaacactgcccgtggattcatctgtaggtgccctgcgggcttc
gagggtgccacgtgtgagaatgatgcccgcacttgtggcagcttgcgctgcctcaatggt
ggtacatgcatctcgggcccacgtagtcccacctgcctatgcctgggatccttcaccggc
cctgagtgccagttcccagccagcagcccctgtgtgggtagcaacccctgctacaatcag
ggcacctgtgagcccacatccgagaaccctttctaccgctgtctatgccctgccaaattc
aacgggctactgtgccacatcctggactacagcttcacaggtggcgctgggcgcgacatt
cccccaccgcagatcgaggaggcctgcgagctgcccgagtgccaggtggacgcaggcaac
aaggtctgcaacctgcagtgtaataatcacgcatgcggctgggatggtggtgactgctcc
ctcaacttcaacgacccttggaagaactgcacacagtccctacagtgctggaagtatttt
agtgacggccactgtgacagccagtgcaactctgccggctgcctctttgacggcttcgac
tgccagctcaccgagggacagtgcaaccccctgtatgaccagtactgcaaggaccacttc
agtgatggccactgcgaccagggctgtaacagtgccgaatgtgaatgggatggtctagac
tgtgctgagcacgtacccgagcggctggcggccggcacgctggtgctggtggtgctgctt
ccaccggaccagctacggaacaactccttccacttcctgcgggagctcagccacgtgctg
cacaccaacgtggtcttcaagcgtgatgcgcaaggccagcagatgatcttcccctactat
ggccatgaggaagagctgcgcaagcacccaatcaagcgctctacagtgggttgggccacc
tcttcactgcttcctggtaccaatggtgggcgccagcgcagggagttggatcccatggac
atccgtggctccattgtctacctggagatcgacaaccggcaatgtgtgcagtcatcctcg
caatgcttccagagtgccaccgatgtggctgccttcctaggcgctcttgcgtcacttggc
agcctcaatattccttacaagatcgaggccgtaaagagtgagccggtggagcctccgctg
ccctcgcagctgcacctcatgtacgtagcagcagccgccttcgtgctcctgttctttgtg
ggctgtggggtgctgctgtcccgcaagcgccggcggcagcatggccagctctggttccct
gagggtttcaaagtgtcagaggccagcaagaagaagcggagagagccccttggtgaggac
tcagtcggcctcaagcccctgaagaatgcctcagatggtgctctgatggatgacaatcag
aacgagtggggggacgaagacctggagaccaagaagttccggtttgaggagccagtggtt
ctccctgacctgaatgatcagactgaccacaggcagtggacccagcagcacctggacgct
gctgacctgcgcatgtctgccatggccccaacaccgcctcagggggaggtggatgctgac
tgcatggatgtcaatgttcgaggaccagatggcttcacgcccctcatgattgcctcctgc
agtggaggaggccttgagacaggcaacagtgaagaagaagaagatgcacctgctgtcatc
tccgacttcatctaccagggcgccagcttgcacaaccagacagaccgcaccggggagact
gccttgcacctggctgcccggtactctcgttcagatgctgcaaagcgcttgctggaggcc
agtgcagatgccaacatccaggacaacatgggccgtactccgttacatgcagcagtttct
gcagatgctcagggtgtcttccagatcctgctccggaacagagccacagatctggatgcc
cgaatgcatgatggcacaactccactgatcctggctgcgcgcctggctgtggagggcatg
ctagaggacctcatcaactcacatgctgatgtcaatgccgtggatgacctaggcaagtcg
gctttgcactgggcagccgctgtgaacaatgtggatgctgctgtcctgctcctgaagaac
ggagccaacaaggacatgcagaacaacaaggaggagactcccctgttcctggccgcccgt
gaaggcagctacgagactgccaaagtgttgctggaccactttgccaaccgggacatcacg
gatcacatggaccgattgccgcgggacatcgcacaggagcgtatgcaccatgatatcgtg
cggcttttggatgagtacaacctggtgcgcagcccacagctgcatggcactgccctgggt
ggcacacccactctgtctcccacactctgctcgcccaatggctacctgggcaatctcaag
tctgccacacagggcaagaaggcccgcaagcccagcaccaaagggctggcttgtggtagc
aaggaagccaaggacctcaaggcacggaggaagaagtcccaggatggcaagggctgcctg
ttggacagctcgagcatgctgtcgcctgtagactccctcgagtcaccccatggctacttg
tcagatgtggcctcgccacccctcctcccctccccattccaacagtctccatccatgcct
ctcagccacctgcctggtatgcctgacacccacctgggcatgagccacttgaatgtggca
gccaagcctgagatggcagcgctggctggaggtggccggttggcctttgagccacccccg
ccacgcctctcccacctgcctgtagcctccagtgccagcacagtgctgagtaccaatggc
acgggggctatgaatttcaccgtgggtgcgccggcaagcttgaatggccagtgtgagtgg
cttccccggctccagaatggcatggtgcccggccagtacaatccactacggccaggtgtg
acgccgggcacactgagcacacaggcagctggcctccagcatagcatgatgggcccacta
cacagcagcctctccaccaatgccttgtccccgattatttaccagggcctgcccaacaca
cggctggcaacacagccccacctggtgcagacccagcaggtgcagccacagaacttacag
atccagcctcagaacctgcagccaccgtcgcagccacacctcagtgtgagctcagcggcc
aatgggccactgggccggagcttcctgagcggggagcccagccaggcagatgtacagccg
ctgggccccagcagtctgcctgtgcacactattctgccccaggagagccaggccctgccc
acatcactgccatcctccatggtcccacccatgaccactacccagttcctgactcctcct
tcccagcacagctactcctcctcccctgtggacaacacccccagccaccagctgcaggtg
cctgagcaccccttcctcaccccatccccagagtcccctgaccagtggtccagctcctcc
ccgcattccaacatctctgattggtccgagggcatctccagcccgcccaccagcatgccg
tcccagatcacccacattccagaggcatttaaataa
DBGET
integrated database retrieval system
