Mus pahari (shrew mouse): 110319996
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Entry
110319996 CDS
T05929
Symbol
Fdps
Name
(RefSeq) farnesyl pyrophosphate synthase isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah00900
Terpenoid backbone biosynthesis
mpah01100
Metabolic pathways
mpah05164
Influenza A
mpah05166
Human T-cell leukemia virus 1 infection
Module
mpah_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
110319996 (Fdps)
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
110319996 (Fdps)
05164 Influenza A
110319996 (Fdps)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mpah01006
]
110319996 (Fdps)
Enzymes [BR:
mpah01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
110319996 (Fdps)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
110319996 (Fdps)
Prenyltransferases [BR:
mpah01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
110319996 (Fdps)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
110319996
NCBI-ProteinID:
XP_021051464
Ensembl:
MGP_PahariEiJ_G0026630
LinkDB
All DBs
Position
4:complement(79540642..79548134)
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AA seq
420 aa
AA seq
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MPLSRWLRSLGVFLLPAPCWAPRERWLGFLQRPSLAYGCPVLGAWHSARWWCQVWTEEPR
AFSSSVRMNGNQKLDVYNQEKQNFIQHFSQIVKVLTEDELGHPETGDAIARLKEVLEYNA
LGGKYNRGMTVVQAFQELVEPKKQDAESLQRALTVGWCVELLQAFFLVSDDIMDSSLTRR
GQICWYQKPGIGLDAINDALLLEASIYRLLKFYCREQPYYLNLLELFLQSSYQTEIGQTL
DLMTAPQGHVDLGRYTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANALKILM
EMGEFFQVQDDYLDLFGDPSVTGKVGTDIQDNKCSWLVVQCLQRASPEQRQILEENYGQK
DPEKVARVKALYEALDLQSVFFKYEEDSYNRLKSLIEQCSAPLPPSIFMELANKIYKRRK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgtcccgctggctgagatctctgggggtcttcctgctgccagccccttgctgg
gcaccccgggagaggtggcttggtttcctacaacgaccctccctggcatatgggtgtcca
gtcctgggggcctggcacagtgcccgctggtggtgccaagtgtggacagaggagcctcga
gcgtttagctcctctgtcagaatgaatgggaaccagaaattggatgtttataaccaagaa
aagcagaatttcatccagcacttctcccagatcgtcaaggtgctgactgaggatgagctg
ggacacccagagacaggagatgctattgcccggctcaaggaggtcctagagtacaacgcc
ttaggtggcaagtacaaccggggtatgaccgtggtacaagccttccaggagctggtggag
ccgaagaaacaggatgctgagagtcttcagcgggccctgacggtgggctggtgtgtagag
ctgctccaggctttcttcctcgtgtcagatgacatcatggactcttccctcacccgccgg
ggacagatctgctggtatcagaagccaggcataggcttggatgccatcaatgacgctctg
cttctggaagcctccatctaccgcctgctgaagttctattgcagggagcagccctactac
ctgaacctgctggagctctttcttcagagttcctatcagactgagatcgggcagactcta
gacctcatgacagcaccccagggccatgtggatcttggtagatacactgaaaagaggtac
aaatcgatcgtcaagtacaagacggctttctactctttctacctgcctatcgcggctgcc
atgtacatggccggcattgatggggagaaggaacatgccaatgctctgaagatcctgatg
gagatgggcgagttcttccaggtccaggacgactaccttgatctctttggcgaccccagt
gtgacgggcaaggtcggcactgacatccaggacaacaaatgcagctggctggtggttcag
tgtctgcaacgagcctctcctgaacagcgccagatcttagaggagaattatgggcagaag
gacccagaaaaagtggctcgggtgaaagcactgtatgaggcgctggatctgcagtctgtg
ttcttcaagtatgaggaagacagttacaaccgcctcaagagtctcatagagcagtgctct
gctcccctgcccccatccatcttcatggaacttgcaaacaagatctacaagcggagaaag
tga
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