Mus pahari (shrew mouse): 110331712
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Entry
110331712 CDS
T05929
Symbol
Slc6a4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04721
Synaptic vesicle cycle
mpah04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
110331712 (Slc6a4)
04721 Synaptic vesicle cycle
110331712 (Slc6a4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mpah02000
]
110331712 (Slc6a4)
Transporters [BR:
mpah02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
110331712 (Slc6a4)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
110331712
NCBI-ProteinID:
XP_021068195
Ensembl:
MGP_PahariEiJ_G0017905
LinkDB
All DBs
Position
14:44723250..44757118
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AA seq
630 aa
AA seq
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METTPLNSQKVLSECKDKEDCQENGVLQKGVPTPADRAEPGQISNGYSAVPSTSAGDEVP
HSVPAATTTLVAEIHQVERETWGKKMDFLLSVIGYAVDLGNIWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTII
AWALYYLISSFTDQLPWTSCKNSWNTGNCTNYFAQDNITWTHHSTSPAEEFYLRHVLQIH
QSKGLQDLGTVSWQLALCIMLIFTIIYFSIWKGVKTSGKVVWVTATFPYIVLSVLLVRGA
TLPGAWRGVVFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWAKRREWFVLIVVITCILGSLLT
LTSGGAYVVTLLEEYATGPAVLTVALIEVVVVSWFYGIAQFCSDVKEMLGFSPGWFWRIC
WVAISPLFLLFIICSFLMSPPQLRLFQYNYPHWSIILGYCIGTSSVICIPIYIIYRLIST
PGTLKERIIKSITPETPTEIPCGDIRMNAV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacacccttgaattctcagaaagtgctgtcagagtgtaaggacaaagaggac
tgccaagaaaatggtgttctgcagaagggtgtccccacgccagcggacagggcagagcct
ggccaaatatccaacgggtactctgcagttcccagcacaagcgctggggatgaagtgcca
cactctgtgccagctgccaccaccaccctggtagctgagattcaccaagtggaacgggag
acctggggcaagaagatggatttcctcctgtctgtcattggctatgctgtggacctgggc
aacatctggcgttttccctacatctgctaccagaatggcggaggggccttcctcctccca
tataccatcatggccatcttcggggggatccccctcttttacatggagctcgcactgggc
cagtaccaccgaaatgggtgcatttctatatggaggaagatctgcccgattttcaaaggc
attggctatgccatctgcatcattgccttttatatcgcctcctactataacaccatcata
gcctgggcactctactacctcatctcctccttcacggaccagctgccctggaccagttgc
aagaactcttggaacactggcaactgcaccaactacttcgcccaggacaacatcacgtgg
acacaccattccacgtcacctgctgaggagttttacttgcgccatgtcctgcagatccac
cagtctaagggactccaggacctggggaccgtcagctggcagttggctctctgcatcatg
ctcatcttcaccattatctacttcagcatctggaaaggagtcaaaacatctggcaaggtg
gtgtgggtgacagccaccttcccttacattgtcctttctgtcctgctggtgaggggagcc
acccttcctggagcctggagaggggttgtcttctacttgaaacccaactggcagaaactc
ttggagacaggggtgtgggtagatgctgcagctcagatcttcttctctcttggtccgggg
tttggggttctcctggcttttgctagctacaacaagttcaacaacaactgttaccaagac
gccctggtgaccagtgtggtgaactgcatgacgagcttcgtctctggctttgtcatcttc
acggtgcttggctacatggctgagatgaggaacgaagatgtgtccgaggtggccaaagac
gcgggccccagcctccttttcatcacatatgcagaggcaatagctaacatgccagcatcc
acattctttgccatcatcttcttcctcatgttaatcacgctgggtttggatagcacgttc
gcaggcctggaaggtgtgatcacagctgtgctggatgagtttccccacatctgggccaag
cgcagggagtggtttgtgctcatcgtggtcatcacttgcatcttgggatccctgctcaca
ctgacatcaggaggggcgtacgtggtgaccctgctggaggagtacgccacgggaccagca
gtgctcaccgtggctctcatcgaggttgtcgtcgtgtcttggttctatggaatcgctcag
ttctgcagcgacgtgaaggaaatgctgggcttcagcccgggatggttttggaggatctgc
tgggtggccatcagccctctgtttctcctgttcatcatttgcagttttttgatgagccca
ccccaactccggcttttccaatacaattatccccactggagtatcatcttgggctactgc
ataggaacatcgtctgtcatctgcatccctatatacatcatttatcggctgatcagcact
ccagggacacttaaggagcgcattattaaaagtatcactcctgaaacaccaacggaaatt
ccgtgtggggacatccgcatgaatgctgtgtaa
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