Mus pahari (shrew mouse): 110331928
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Entry
110331928 CDS
T05929
Symbol
Brip1
Name
(RefSeq) Fanconi anemia group J protein isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03440
Homologous recombination
mpah03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110331928 (Brip1)
03460 Fanconi anemia pathway
110331928 (Brip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpah03400
]
110331928 (Brip1)
Enzymes [BR:
mpah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
110331928 (Brip1)
DNA repair and recombination proteins [BR:
mpah03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
110331928 (Brip1)
FA (Fanconi anemia) pathway
Downstream FA components
110331928 (Brip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
DUF1866
Motif
Other DBs
NCBI-GeneID:
110331928
NCBI-ProteinID:
XP_021068460
Ensembl:
MGP_PahariEiJ_G0018041
LinkDB
All DBs
Position
14:complement(53714706..53852636)
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AA seq
1175 aa
AA seq
DB search
MSSVSSEYTIGGVKIHFPCRAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSA
LAWQQSLSEKPVDEGLNKKPEAPSSCSCACHSKSFTYSDTNLDTSPHFSSPSKPSSGRNG
VSSPCQDSPEKNTLAAKLSAKKQASIHRDEDDDFQVEKKRIRPLETTQQIRKRHCLEKDV
HHLDARLPSEKRVKPESPIGKSFSDRKDSFQNPDGLCSRCCCSAKQGNNEESANTVKKDH
GGQTKRPKIYFGTRTHKQIAQITRELRKTAYSGVPMTILSSRDHTCVHPEVVGNFNRKEK
CMELLDGKHGQSCYFYHGVHKISNQQTLQHLQGMSRAWDIEELVSLGKKLKACPYYTARE
LIDDADIVFCPYNYLLDSQIRETMDIKLKGQVVILDEAHNIEDCARESASYSVTEVQLRF
ARDELDSLINSNIRKKSHEPLRDVCCNLINWLETNSKHLVERSYESSCKIWSGNEMLLDL
YRMGITTATFPGLQRHLSAVLQKEEKATSIHGKEEAIQIPIISASTQIMLKGLFMVLDYL
FRENSRFADDYKVAIQQTYSWTNQIAIFDKTAVLAVPKNKKNSRQKIGVNALNFWCLNPA
VAFSDINDKVRTIVLTSGTLSPLKSFSSELGVTFSIQLEANHVISNSQVWVGTVGSGPKG
RNLCATFQHTETFEFQDEVGMLLLSVCQTVSQGILCFLPSYKLLQKLRERWIFTGLWHSL
ESVKTVIAEPQGGEKTDFDELLQVYYDAIKFKGEKDGALLIAVCRGKVSEGLDFSDDNAR
AVITVGIPFPNVKDLQVELKRQYNDHHSKSRGLLPGRQWYEIQAYRALNQALGRCIRHKN
DWGALILVDDRFNNNPNRYISGLSKWVRQQIQHHSSFASALESLTEFSRRHQKVINRSKK
DEKHTKDNEPTLEVACLEDSTFTSVSEASHRSPENSTKEAKVCVQELQHPQMAAKNPSVP
SHGISRRKKSDPGLSEESLQTMKTEKNEISRSSSPTFGKQTEPVNWPIFKSLRRHFNSKV
KNCTPVLKSSKNHALGSSAFSKTALPLTGKCASSNKTAADTSLGPCPQSEVLISPVKIEA
TPATNHSKQVFCSEKDLLPGTELSPGTEEAKCPSSNKAAETEVDNDSECFTPELFDPVDT
NEENSELVETDRSSNNSDCFSAEELFETATGFGQK
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcagtgtcgtctgaatacaccatcggtggcgtgaagattcactttccctgtaga
gcttatccagcacagcttgctatgatgaattctattgtcagaggactcaacagtagccaa
cattgtttgttggagagtcccacaggaagtggaaaaagtttagccttactttgttctgca
ttagcatggcaacaatctcttagtgagaagccagtggatgaggggctgaataaaaagccc
gaggcgccatcttcatgttcttgtgcatgccattcaaagagttttacgtacagcgacaca
aacctggacacttcacctcatttcagtagtccaagcaaaccatcttctggaagaaatgga
gtctcatcaccctgtcaagactctcctgaaaaaaatactctggctgcaaagttatctgcc
aagaaacaggcatctatacacagagatgaagatgatgattttcaggtagagaagaaaaga
atccgacccttagaaactacacagcagataagaaaacgtcattgtttggaaaaggatgtc
caccatttagatgcacgactaccttcggaaaagagagtaaagcctgagtctccaatagga
aagtctttctccgacaggaaagactctttccaaaatcctgatggcctttgttccaggtgc
tgctgttctgctaaacaaggaaacaacgaagagtctgcaaatactgttaagaaagatcac
gggggacaaaccaagagacctaaaatttattttgggacacggacacacaagcagattgct
cagattaccagggagctccgtaagacagcttactcaggggtccccatgactattctttcc
agcagggatcacacttgtgttcatcctgaagtcgtgggaaacttcaacagaaaagaaaag
tgcatggagctgctggatggcaaacacgggcagtcttgctatttctatcatggtgttcat
aaaattagtaatcagcagacactgcagcatcttcaggggatgtccagagcctgggacata
gaagaacttgtcagcctcgggaagaaactgaaagcttgtccctactatacagctcgagaa
ctgatagatgatgctgacatagttttttgtccctacaattaccttttagactcacaaata
agggaaactatggatataaagctgaaaggacaagttgtcattttagatgaagctcataat
attgaagactgtgctcgggaatcagcaagctacagtgtaacagaagttcagcttaggttt
gctcgggatgagctagatagtttgatcaacagtaatataaggaagaaaagccacgagccc
ctacgagatgtgtgctgtaacctcatcaattggttagaaacaaattctaagcatcttgta
gaaaggagttatgaatcgtcttgtaaaatatggagtggaaatgagatgctcttagactta
tacaggatgggcatcaccacagccacttttccaggactgcagagacatctctcagctgtt
cttcaaaaagaagagaaagccacatcaatccatggtaaagaggaggcaatacaaatacct
attattagtgcatcaactcaaatcatgctcaaaggactctttatggtgcttgactatctc
tttagagaaaatagcagatttgcagatgattataaagttgctattcaacagacttactcc
tggacaaatcagattgctatttttgataaaactgcagtcttggctgtaccaaaaaataag
aaaaattcacgacagaaaattggagttaatgcgctaaacttttggtgcttaaatccagct
gtggccttttcagatattaatgacaaagtacggaccattgttctaacatcaggaacactc
tcacccctgaaatccttttcatctgagcttggtgtcacatttagcatccaactggaggct
aaccatgtcatcagtaactcacaggtttgggttggtactgttggctcaggccctaagggt
cggaatctctgcgctacctttcagcatactgaaacatttgagttccaggatgaagtggga
atgcttctgttatctgtgtgccagactgtgagccaaggaattctgtgctttttgccatct
tacaagctattacagaaattaagagaacgttggattttcactggcctatggcatagtttg
gagtcagtgaagacagtcattgcagaaccccaaggaggagaaaaaactgattttgatgaa
ttgctgcaggtgtactatgacgccatcaagttcaaaggagaaaaggatggagcccttctc
atagcagtttgtcgcggcaaggtgagcgagggtctggatttttcagatgataacgcccgt
gctgtcataaccgtagggattcctttcccaaatgtgaaggatcttcaggtggagctaaaa
cgacaatacaatgaccaccactcaaaatcgagaggtcttctgcctggccgtcagtggtac
gaaattcaagcgtacagagccttgaatcaggctctaggcagatgtattcggcacaaaaat
gactggggagctcttattctagtggatgatcgcttcaataacaacccaaaccgctatata
tcaggactttctaaatgggtgaggcagcagattcagcaccactcaagctttgcaagtgcc
ttggagtcgctgactgagttctccagaagacaccagaaagttattaatagatccaaaaaa
gacgaaaaacatacaaaagacaatgagcctactctggaagtagcctgtttggaggatagc
acctttacaagtgtgtcagaagcaagccatcggtcaccagaaaactctaccaaagaagca
aaagtgtgtgtccaggagctgcagcatccccagatggctgctaaaaacccctcagtacca
agtcacggcatttccagaaggaagaaaagtgatccaggactaagcgaagaatctcttcag
acaatgaaaacagaaaaaaatgagatttcccgatcttcaagcccaactttcgggaagcag
acagagccagtcaactggcctatctttaaatctctacgccgccatttcaatagtaaagta
aaaaattgcacaccagtactcaagtcatcaaagaaccatgcccttggttcttccgctttc
agtaaaactgctttgccactcacaggtaagtgtgcgtcctcaaacaaaacggcagcagac
acatcattgggaccttgccctcagtcagaagtcctaatttcaccagtgaagattgaagct
actcctgctacgaatcattccaaacaggtgttctgctctgagaaagacctactcccgggt
accgagttgtctccgggaactgaggaagccaagtgtcccagctcaaacaaagctgctgag
acagaagtggacaacgactctgagtgcttcacacctgaactttttgatcctgtcgatacc
aacgaagaaaacagtgaactagttgaaaccgatagatccagtaataattcagattgtttt
tcagcggaagagctttttgaaactgcaactggatttgggcagaagtga
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