Mus pahari (shrew mouse): 110338208
Help
Entry
110338208 CDS
T05929
Symbol
Cacna1h
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04010
MAPK signaling pathway
mpah04020
Calcium signaling pathway
mpah04713
Circadian entrainment
mpah04925
Aldosterone synthesis and secretion
mpah04927
Cortisol synthesis and secretion
mpah04929
GnRH secretion
mpah04934
Cushing syndrome
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110338208 (Cacna1h)
04020 Calcium signaling pathway
110338208 (Cacna1h)
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
110338208 (Cacna1h)
04925 Aldosterone synthesis and secretion
110338208 (Cacna1h)
04927 Cortisol synthesis and secretion
110338208 (Cacna1h)
09159 Environmental adaptation
04713 Circadian entrainment
110338208 (Cacna1h)
09160 Human Diseases
09167 Endocrine and metabolic disease
04934 Cushing syndrome
110338208 (Cacna1h)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mpah04040
]
110338208 (Cacna1h)
Ion channels [BR:
mpah04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
110338208 (Cacna1h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Neur_chan_memb
TMEM208_SND2
Motif
Other DBs
NCBI-GeneID:
110338208
NCBI-ProteinID:
XP_021077140
Ensembl:
MGP_PahariEiJ_G0023555
LinkDB
All DBs
Position
21:complement(20317773..20377998)
Genome browser
AA seq
2359 aa
AA seq
DB search
MTEGTLAADEVRVPLGASPSAPAAPVRASPASPGAPGREEQRGSGSGVLAPESPGTECGA
DLGADEEQPVPYPALAATVFFCLGQTTRPRSWCLRLVCNPWFEHISMLVIMLNCVTLGMF
RPCEDVECRSERCSILEAFDDFIFAFFAVEMVIKMVALGLFGQKCYLGDTWNRLDFFIVM
AGLMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFV
FFIFGIVGVQLWAGLLRNRCFLDSAFVRNNNLTFLRPYYQTEEGEENPFICSSRRDNGMQ
KCSHIPSRRELRVQCTLGWEAYGQPQAEDGGASRNACINWNQYYNVCRSGEFNPHNGAIN
FDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIAT
QFSETKQRENQLMREQRARYLSNDSTLASFSEPGSCYEELLKYVGHIFRKVKRRSLRLYA
RWQSRWRKKVDPSSTLHGQGSGRRPRRAGRRTASVHHLVYHHHHHHHHHYHFSHGGPRRP
SPEPGAGDTRLVRACVPPSPPSPGHRPPDSESVHSIYHADCHVEGPQERARVAHTIATAA
SLKLASGLGTMNYPTILPSGAVNSKGGTSSRPKGLRGAGTPGATAHSPLSLGSPSPYEKI
QHVVGEQGLGRASSNLSGLSVPCPLPSPQAGTLTCELKSCPYCASALEDPEFELSGSESG
DSDAHGVYEFTQDVRHGDCRDPVQQPQEGGTPGHGSERRRLPLRTASQPGGLGRLWASFS
SKLRRIVDSKYFNRGIMAAILVNTLSMGVEYHEQPDELTNALEISNIVFTSMFALEMLLK
LLACGPLGYIRNPYNIFDGIVVVISVWEIVGQADGGLSVLRTFRLLRVLKLVRFLPALRR
QLVVLMRTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLKTDSGDTVPDRKNFDSLLWA
IVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGD
ATRSDTDEDKTSTHLEEDFDKLRDVRATEMKMYSLAVTPNGHLEGRGSLPPPLITHTAAT
PMPTPKSSPHLDMAHALLDSRRSSSGSVDPQLGDQKSLASLRSSPCAPWGPNSAGSSRRS
SWNSLGHAPSLKRRSQCGERESLLSGEGKGSTDDEAEDSRPCSGTHPGASPGPRATPLRR
AESLGHRSTLDLCPPRPAALLPTKFRDCNGQMVALPSEFFLRIDSHKEDAAEFDDDIEDS
CCFRLHKVLEPYAPQWCGSRESWALYLFPPQNRLRVSCQKVIAHKMFDHVVLVFIFLNCI
TIALERPDIDPGSTERAFLSVSNYIFTAIFVVEMLVKVVALGLLWGEHAYLQSSWNVLDG
LLVLVSLVDIIVAVASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRP
IGNIVLICCAFFIIFGILGVQLFKGKFYYCDGTDTRNITTKAECHAAHYRWVRRKYNFDN
LGQALMSLFVLSSKDGWVNIMYDGLDAVGIDQQPVQNHNPWMLLYFISFLLIVSFFVLNM
FVGVVVENFHKCRQHQEAEEARRREEKRLQRLERRRRKAQRRPYYADYSHTRRSIHSLCT
SHYLDLFITFIICLNVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEAALKLVAFGFRR
FFKDRWNQLDLAIVLLSIMGIALEEIEMNAALPINPTIIRIMRVLRIARVLKLLKMATGM
RALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGRLECSEDNPCEGLSRHATFTNFG
MAFLTLFRVSTGDNWNGIMKDTLRECTREDKHCLSYLPALSPVYFVTFVLVAQFVLVNVV
VAVLMKHLEESNKEAREDAEMDAEIELEMAQGSPARPPATAQESQGTQPDTPNLLVVRKV
SVSRMLSLPNDSYMFRPVAPAAAPHPHPLQEVEMETYPGPVTSAHSPPLEPRTSFQVPSA
ASSPARVSDPLCALSPRDTPRSLSLSRILCRQEAMHAESLEGQIDDAGEDGIPDLTEPAE
NTSTSQAPLGALRSPPCSPRPASVRTRKHTFGQRCISSRPPTLGGGDAEAADAADEEVSH
ITSSAHPWPATEPHSPEASPTASPAKGTVGSGRSPHRFRSVDAQSFLDKPGRPDAQRWSS
VELDNGDSHPESGEARARASELEPALGARRKKKMSPPCISIEPPTEDEGSSRPPAAEGGN
TTLRRRTPSCEAALHRDCPESTEGPGTGGDPVAKGERWGQASCRAEHLTVPNFAFEPLDM
GGPGGDCFLDSDQSVTPEPRVSSLGAIVPLILETELSMSSGGPPEKEQGLYLTVPQTPLK
KPGSPPAAPAPDDSGDEPV
NT seq
7080 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagggcacgctggcagctgacgaggtccgggtgcccctgggcgcttcgccttcg
gcccctgcagcgccggtgagggcttccccagcgagccctggggcgccggggcgcgaggag
cagcgaggatctgggtcgggcgtgttggctcccgagagcccagggaccgagtgtggtgcg
gacctgggcgccgacgaggaacagcccgtcccataccccgctctggctgccacagtcttc
ttctgcctcgggcaaaccacgcggccgcgcagctggtgcctccgactggtttgtaacccg
tggttcgagcacattagcatgctggtcatcatgctgaactgcgtgacgctgggcatgttc
cggccctgtgaggatgttgagtgccgttcagaacgttgcagcatcttggaggcctttgat
gacttcatctttgccttctttgctgtggagatggtcatcaagatggtggccttgggactg
tttggccagaagtgttatctgggtgatacctggaacaggctggacttcttcattgtcatg
gcggggttgatggagtactccctggacggacacaatgtgagtctctctgccatccgaacg
gtgcgtgtgctgcggcccctccgcgccatcaaccgggtccccagcatgcgaatcctggtc
actctgctgctggacacactgcccatgcttgggaacgtccttcttctctgcttcttcgtc
ttcttcatcttcggcatcgttggggtccagctctgggctggccttctgcggaaccgctgc
ttcctggacagcgcctttgtcaggaacaacaacctgaccttcttgcggccatactaccag
acagaggagggcgaggagaaccctttcatctgttcctcacgccgtgacaatggcatgcag
aaatgctcacacatccccagccgccgtgagcttcgcgtgcagtgcacacttggctgggag
gcctatgggcagccacaggctgaggacgggggtgccagccgcaatgcttgtatcaactgg
aaccagtactacaacgtgtgccgctcaggggaattcaaccctcacaatggtgccatcaac
tttgacaacattggctatgcttggatcgccatcttccaggtcatcacactggagggctgg
gtggacatcatgtactacgtcatggatgcccactcattctacaacttcatctacttcatc
ctcctcatcattgtgggctccttcttcatgatcaacctgtgcctggtggtgatagccaca
cagttctcagagacaaagcagagggaaaaccagctgatgcgtgaacagcgggcccgctat
ctatccaacgacagcactctggccagcttctcagagcctggcagctgctacgaggaacta
ctcaagtatgtaggccacatcttccgaaaggttaaacgccgtagcctgcgcctttatgcc
cgctggcagagccgttggcgtaagaaggtagatcccagcagcaccctgcatggccaaggg
tccgggcggcggccacggcgggcaggcaggcgcacagcttctgtgcaccatctggtctac
caccaccaccaccaccatcaccaccattaccacttcagccacggtggcccacgcaggcct
agcccagagccaggtgctggcgacaccaggttggtcagggcctgtgtgccaccctcgcca
ccatccccaggccacaggccgccagactctgagtctgtgcacagtatctaccatgccgac
tgccacgtggaggggccacaggaaagagcccgtgtggcgcacaccatagccactgctgcc
agcctcaagctggcctcaggcttgggcaccatgaactaccccaccatcctaccttcagga
gcagtcaacagcaaaggtggtaccagctcacgacccaaggggcttcggggcgctggcacc
ccaggggctacagcacacagccctctgagcctggggagccccagcccctatgagaagatc
cagcacgtggttggagaacaaggactaggccgagcctctagcaacctgtcaggcctgagt
gtgccttgccccctgcccagcccccaggctggcacgctgacctgtgagctgaagagctgc
ccatattgtgccagcgccctggaggaccccgagtttgagttgagcggctcagagagcggg
gactcggatgcccatggagtctatgagtttacacaggacgtacggcatggggattgccgg
gatcctgtgcagcagccccaggaagggggcacgccaggccatggcagtgagcggcggcga
ctgccactgcggacagcctcacagccaggagggttaggccgcctctgggcttcctttagt
agcaagctgcgtcgcattgtagacagcaagtacttcaaccgaggcatcatggcggccatc
ctcgtcaatactctgagcatgggtgttgagtatcatgagcagcctgatgagctgactaac
gccctggagataagcaatatcgtgttcaccagcatgtttgccttggagatgttactgaag
ttgctggcctgtggccctctgggatacattcggaacccctacaacatcttcgatggcatt
gttgtcgtcataagcgtctgggagatcgtggggcaggcagatggcggtctgtcggtgctc
cgtacgttccggctgctacgggtgctgaagctggtgcgcttcctgccagccctgcggagg
cagctggtggtgctcatgaggaccatggataacgtggccaccttctgcatgctgctcatg
ctcttcatcttcatcttcagcatcctgggtatgcacctgtttggctgtaagttcagcctg
aagacagactctggagacaccgtccctgacaggaagaacttcgactctctactgtgggcc
attgtcactgtgtttcagatcttgacccaggaagactggaatgtggttctttacaacggc
atggcttccacctcatcctgggctgccctttacttcgtggccctcatgacctttgggaac
tacgtgctcttcaacctgctggtagccatcctggtggaaggcttccaggcagagggtgat
gccaccagatctgacaccgatgaggataagacgtctacccatctggaggaagatttcgat
aagctcagagatgttcgagccacagagatgaagatgtactcactggctgtgacccctaac
gggcatctagagggccgaggcagtctgccgccgcctctcatcacgcacacagcggctacg
cctatgcctacccccaagagctccccgcatctggacatggcccatgctcttctggactca
cggcgcagcagcagcggctctgtggacccccaactcggggaccagaagtctctggccagc
ctgcgcagctccccttgtgccccatggggccccaacagtgcagggagcagccggcgctcc
agctggaacagcctgggccacgcacccagcctcaaacgccgcagccagtgtggggagcgc
gagtccctgctctctggcgaggggaagggcagcacggatgacgaggccgaggacagcaga
ccgtgctcggggacccacccaggagcttcacccgggccccgagccacacccctgcggcgc
gctgagtcgctgggccaccgcagcacgctggacctgtgtcccccacggcctgccgccctc
ctgcccaccaagttccgtgactgcaacgggcagatggtggccctgcccagcgagttcttc
ctgcgcatcgacagccacaaggaggatgcagctgagtttgatgatgacatagaggatagc
tgctgcttccgcctgcacaaagtgctggaaccctacgcgccccagtggtgcggcagccgg
gagtcctgggccctgtatctcttcccaccgcagaacaggctgcgcgtctcctgccagaaa
gtcatcgcacacaagatgtttgatcacgtggtccttgtcttcatcttcctcaactgtatc
accattgccctggagaggccagacattgacccgggcagcaccgagcgggccttcctcagc
gtctccaactacatcttcacagccatcttcgtggtggagatgttggtgaaggtggtagcc
ctggggctgctgtggggtgagcatgcctacctgcagagcagctggaacgtgctggacggg
ctgcttgtcctggtgtccctggttgacatcatcgtggccgtggcctctgccggtggtgcc
aagatcctaggcgtcctgcgcgtgctgcgcctgctgcggaccctgaggcctctgagggtc
atcagcagagctccaggtctcaagttggtcgtagagactctgatatcgtcgctcaggccc
atcgggaacatcgtcctcatctgctgcgccttcttcattatctttggcatcctcggggtg
cagcttttcaagggcaaattctactactgcgacggtacagataccaggaatatcaccacc
aaggccgagtgccatgccgcccactaccgctgggtgaggcgcaaatacaactttgacaac
ctgggtcaggcgctgatgtctctgttcgtgctgtcgtccaaggatggctgggtaaacatc
atgtacgacgggctggacgccgtgggcatcgaccagcagcctgtacagaaccacaacccc
tggatgctgctctacttcatctccttcctgctcatcgtcagcttcttcgtgctcaacatg
tttgtgggagtggtggtggagaacttccacaagtgcaggcagcaccaggaggccgaggag
gcgcggcggcgcgaggagaaacggctgcagcgcctggagaggaggcgcaggaaggcccag
cgccggccctactacgcagactattcacacacgcgccgctccatccattcgctgtgcacc
agccactacctggacctcttcatcaccttcatcatctgcctcaatgtcatcaccatgtcc
atggagcactacaatcagcccaagtctctggacgaggcccttaagtactgcaactacgtc
tttaccatcgtcttcgtctttgaggccgcactgaagctggtggcctttgggttccggagg
ttcttcaaggacaggtggaaccagctggacttggccatcgtcctcctgtccatcatgggc
attgcgctggaggagattgagatgaatgccgccctccccatcaaccccaccatcatccgc
atcatgcgtgtgcttcgcatcgcccgtgtgctgaagctactgaagatggccacaggcatg
cgtgccctgctggacactgtggttcaagctctgcctcaggtagggaaccttggtcttctt
ttcatgctcctgttttttatctatgctgccctgggagtggagctgtttgggaggctagaa
tgcagcgaggataatccctgtgagggcctgagcagacacgccaccttcaccaactttggc
atggccttcctcacgttgttccgggtgtccactggggacaactggaacgggatcatgaag
gatacgctccgcgaatgtacccgtgaggacaagcactgcctcagctacctgcccgcgctc
tcccccgtctacttcgtcacctttgtgctggtcgcccagttcgtgctggtcaacgtggtg
gtggccgtgctcatgaagcacctggaggagagcaacaaggaggcccgggaggatgcagag
atggacgccgagattgagctggagatggcacagggctccccggcccggcccccggccacg
gcccaggaaagccaaggtacccagccagacaccccgaacctcctggtcgtgcgcaaagtg
tctgtgtccaggatgctctcgctacccaatgacagctacatgttccggccggtggctccc
gcggctgccccacatccccacccgctgcaggaagtggagatggagacctacccaggcccg
gtcacctctgctcactcgccgcccctggagccccgcacctccttccaggtcccatcagct
gcgtcctccccagccagggtcagcgaccccctttgtgccctctcaccccgggatacgccc
cgctctctgagtctctcacggatactctgcagacaggaggccatgcacgcagagtccctg
gaagggcagatagatgacgctggagaagacggtatcccagacctcacggagcctgctgaa
aatacctccacaagccaggcacctctgggcgccctgaggtcccctccgtgctccccacgg
cctgccagtgtccgtacccgcaagcacacttttgggcagcgctgcatctccagccgacct
cccaccctgggaggaggtgacgctgaggcagcagacgcagccgacgaggaggtcagccac
atcacaagctcagcccacccctggcccgctacagagccccacagcccagaggcctcccct
accgcctctcctgcaaaaggcacagtgggcagtgggcggagcccacacaggttccgcagc
gtagacgctcagagcttcctggacaaaccaggtcggccagatgcgcagcggtggtcctcg
gtggaactggataatggggacagccacccagagtctggggaagcgagggcccgggcctca
gagctcgaaccagctcttggggcgcggaggaagaagaagatgagccctccctgcatctcc
attgaacctcccaccgaggatgagggctcctcccgcccccctgcggccgaaggaggcaac
actaccctaaggcgccgaaccccgtcctgtgaggctgccctccatagggactgcccagag
tctacagagggcccaggcactggaggggaccccgtagccaagggtgagcgctggggccag
gcctcttgccgggcagagcatctgactgtccccaactttgcctttgagcctctggacatg
ggcgggcctggtggagactgtttcttggacagtgaccaaagtgtgaccccagaacccaga
gtttcctctttgggggctatagtgcctctaatactagaaactgaactttctatgtcctct
ggtggccccccagagaaggagcaaggactgtacctcactgtgccccagacccccttgaag
aaaccagggtctcccccagccgctcctgccccagacgacagtggagatgagcctgtgtag
DBGET
integrated database retrieval system
