Methanocella paludicola: MCP_0352
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Entry
MCP_0352 CDS
T01142
Symbol
rpoE1
Name
(GenBank) DNA-directed RNA polymerase subunit E'
KO
K03049
DNA-directed RNA polymerase subunit E' [EC:
2.7.7.6
]
Organism
mpd
Methanocella paludicola
Pathway
mpd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mpd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MCP_0352 (rpoE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpd03021
]
MCP_0352 (rpoE1)
Enzymes [BR:
mpd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MCP_0352 (rpoE1)
Transcription machinery [BR:
mpd03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MCP_0352 (rpoE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
IDEAL
Motif
Other DBs
NCBI-ProteinID:
BAI60424
NITE:
MCP_0352
UniProt:
D1YVF2
LinkDB
All DBs
Position
356219..356806
Genome browser
AA seq
195 aa
AA seq
DB search
MYRKVRLVDIIRIPPQRLEEDLEQVITETIRDKLEGRIDKALGSIVAVLDIVDIGEGHIL
VGDGAVYYEVTFDAISYRPELQEIVEGQVVEIVAFGAFVSVGPIDCLVHVSQVADEFMSY
DEKNSRLVSKESSKSLGEGDSVRARIVAVSLNEHDARESKIGLTMRQVALGKLEWIEEEQ
RRKEKGERPEKARAS
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgtacaggaaagtcaggcttgttgatatcatacggataccgccgcagaggctggaagaa
gacctcgagcaggtcatcaccgagaccatacgggataagctggaggggcgcatcgataag
gccctcggctctattgttgcggtgctcgacatcgtcgacatcggcgaggggcacatcctg
gtgggcgacggcgccgtctactatgaggtgacgttcgacgccatatcttaccgccccgaa
ttacaggagatcgtggaggggcaggtggtcgagatcgtggccttcggcgcgttcgtgagc
gtggggcccatcgattgtctggtgcacgtcagccaggtggcggacgagttcatgtcctac
gacgagaagaattcccggctggtcagcaaggagtccagcaagtcgctcggagagggcgac
agcgtgcgcgcccgcatcgtggcggtcagcctcaacgagcacgacgcccgcgagagcaag
atcggcctgacgatgaggcaggtcgcgctgggcaagctcgagtggatcgaggaggagcag
cgccgtaaggaaaagggcgagcggcccgagaaggccagggcttcgtag
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