Methanocella paludicola: MCP_1218
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Entry
MCP_1218 CDS
T01142
Symbol
rpoA1
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
mpd
Methanocella paludicola
Pathway
mpd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mpd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MCP_1218 (rpoA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpd03021
]
MCP_1218 (rpoA1)
Enzymes [BR:
mpd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MCP_1218 (rpoA1)
Transcription machinery [BR:
mpd03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MCP_1218 (rpoA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
DUF2688
Motif
Other DBs
NCBI-ProteinID:
BAI61290
NITE:
MCP_1218
UniProt:
D1YXW8
LinkDB
All DBs
Position
1205026..1207659
Genome browser
AA seq
877 aa
AA seq
DB search
MTAPKRIRKIKFGLLSPAEIRKMSVTKVITADTYDDDGYPIDMGLMDPRLGVIDPGLRCK
TCGGRPGECPGHFGHIELASPVIHVGFARLLRKILMTTCRRCGKLMLDDKAKADYIRQIK
TNIRLGQPTDEIVKNVFKDAKSTTCPYCGEEQKEIKFEKPTGYIEDGHKLMPTDVRDRLE
MIPDEDIEVFGMDPKNARPEWMVLTVLPVPPVTVRPSITLESGQRSEDDLTHKLVDIIRI
NQRFQENRDAGAPQLIIEDLWELLQYHVTTYIDNAVSGVPPARHRSGRPLKTLSQRLKGK
EGRFRGSLSGKRVNFSARTVISPDPNLSINQVGVPMSIAREMTIPVTVTPFNIESTKEYV
RRGSENHPGANYVKRPDGRRLKVTDKNCSELADALDIGWKIDRQLKDGDIVLFNRQPSLH
RMSIMGHFVKVMPNKTFRLNPAVCAPYNADFDGDEMNLHVPQNMEAMAEARILMLVQENI
LSPRFGGPIIGGLHDHISGIYLLTKGYQMFSETEALDVVRKVGIKELPEPAKVENGAQYW
SGKQIFSVILPKTLSMTYKAKICENCEVCKKEECEKDAYVVIRDGVLKCGTVDEKAIGAF
SGKIVDRIVKTYSEDTAAKFIDDVTRLAIRAIMRFGFSYGISDTDIPREAKVQTTDIILD
SEKQVKKLIEAFDAGELESLPGRTLKETLELRIMQELAKARDAAGSIAGKHLASEGNNSA
VIMARSGARGSFLNLTQMTGCVGQQSVRGERIMRGYSDRTLPHFQPGDLGADSRGFVESS
YKKGLNPTEFFFHAMGGREGLVDTAVRTSQSGYLQRRLVNALQDLEVKYDGTVRETRGVI
VQFEYGEDGVDPMKSDYGEGVNVQHIVETVANGGDSK
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaccaaagaggatccgtaagataaagttcggcctgctatcgccggccgagata
cgcaagatgagcgtgacgaaggtcatcactgccgatacgtacgacgacgatggctatccc
atcgacatgggcctgatggacccccggctgggcgttatcgaccccggcctgaggtgcaag
acctgcggcggaaggccgggcgaatgcccgggccacttcggccacatcgagctcgcctcg
cccgtcattcacgtgggcttcgcgcgcctgctccgtaagatcctgatgacgacctgccgg
cgctgcggaaagctgatgctggacgacaaggcgaaggccgattacatccgccagatcaag
accaacatccggctgggccagcccaccgacgagatcgtcaagaacgtcttcaaggacgcg
aaatcgaccacctgcccgtactgcggcgaggagcagaaggagatcaagttcgaaaagccg
accggctacatcgaggacggccacaagctgatgcccaccgatgtccgtgacaggctcgag
atgatcccggacgaggatatcgaggtcttcggcatggacccgaagaacgctaggcccgaa
tggatggtcctgaccgttctgccggtaccgccggtaaccgttcgcccgtccatcaccctc
gagagcgggcagcgctccgaggatgacctgacccacaagctcgtggacatcatccgcatc
aaccagcggttccaggagaaccgggacgcaggcgccccgcagctcatcatcgaagacctg
tgggaactgttacagtaccacgttaccacttacatcgataacgccgtatcgggcgttccg
ccggccaggcacaggagcggcaggccattaaagacgctatcgcagcgtctcaagggtaag
gaaggccgtttcaggggctcattatccggtaagcgtgtcaacttcagcgcccgtaccgtc
atctcgcccgaccccaacctgagcatcaaccaggttggcgtgcccatgagcatcgcgcgg
gaaatgaccatacccgtgaccgtgactcccttcaacatcgagtcgacgaaagagtacgtc
cgccgcggctccgaaaaccaccccggcgctaattacgtgaagaggccggacggccgcagg
ctcaaggtcaccgataagaactgcagcgagctggccgacgcgctcgacatcgggtggaag
atcgaccgccagctcaaggacggcgacatcgttctctttaaccggcagccgtcgctgcac
cgcatgagcatcatgggccacttcgtgaaagtgatgcccaacaagacgttcaggctcaac
ccggcggtctgtgctccctataacgccgactttgacggcgacgaaatgaacctgcacgtg
ccccagaacatggaggccatggccgaggcgcgcattctcatgctggtacaggagaacatc
ctgtccccgaggttcggcggccccatcatcggcggcctgcacgaccacatctcaggcatt
tacctgctgaccaaaggctaccagatgttcagcgagaccgaagcgctggacgtggtccgg
aaggtcgggatcaaggaattacccgagcccgcgaaggtcgagaacggcgcccagtactgg
agcggcaagcagatcttcagcgtcatcctgccgaagacgctgagcatgacctacaaggcc
aagatctgcgagaactgcgaggtctgtaagaaagaggaatgcgagaaggacgcttacgtc
gttatccgtgacggcgtgctgaagtgcggcacggtggacgagaaggccatcggcgctttc
agcggcaagatcgttgaccgtatcgtcaagacgtacagcgaggacacggcggccaagttc
atcgacgatgtcacgcgtctcgctatccgtgccatcatgcggtttggcttctcctacggt
attagcgacaccgacatacccagagaggccaaggttcagaccaccgatatcatcctcgac
tccgagaagcaggtcaagaaacttatcgaagcgttcgacgctggcgagctcgaatcttta
cctggcaggactcttaaggagacgctcgaattacgcatcatgcaggaactggcaaaggcc
agagacgccgccggctccatcgcgggcaagcacctcgcgagcgagggcaacaactcggcg
gtcatcatggcccggtccggcgccaggggcagcttcctgaacctgacacagatgaccggg
tgcgtcggccagcagtccgtccgtggagagcggatcatgagaggctacagcgacaggacg
ctcccgcacttccagcctggcgacttaggcgcggactcgagaggcttcgtcgaatcctcg
tataaaaagggcctgaacccgaccgagttcttcttccacgcaatgggcggcagagagggt
ctcgtcgatactgcggtcaggacatcacagtccggttacctgcagcgcaggcttgttaac
gcactacaggacctcgaggtcaagtacgacggcacggtaagagagacccggggcgtcatc
gtccagttcgaatatggcgaggacggcgtcgacccgatgaagagcgactacggcgagggc
gtgaacgtccagcatatcgtcgagaccgtcgcgaacgggggtgactcgaagtga
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