Monomorium pharaonis (pharaoh ant): 105837596
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Entry
105837596 CDS
T05760
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03020
RNA polymerase
mpha03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105837596
09124 Replication and repair
03420 Nucleotide excision repair
105837596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpha03021
]
105837596
03400 DNA repair and recombination proteins [BR:
mpha03400
]
105837596
Enzymes [BR:
mpha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105837596
Transcription machinery [BR:
mpha03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
105837596
DNA repair and recombination proteins [BR:
mpha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
105837596
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
105837596
NCBI-ProteinID:
XP_012537954
LinkDB
All DBs
Position
Unknown
AA seq
1178 aa
AA seq
DB search
MSNIFGIEDDQYDEEDADEISSKLWQEACWILINAYFDEKGLVRQQLDSFDEFIEMSVQR
IVEDSPQIELQAEAQHTTGEIEKPVKHLLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRN
LTYSAPLYVDITKTIEKDGEDPIETQHQKTFIGKIPIMLRSKYCLLAGLSDRDLTELNEC
PLDPGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKAEIRSCLEHSSRPTSTLWI
NMMAKSGASIKKSAIGQRIIAIIPYIKQEIPIMVVFRALGFVADRDILEHIIYDFDDPEM
MEMVKPSLDEAFVIQEQNVALNFIGTRGAKPGVTKEKRIKYAREILQKEMLPHVGISDFC
ETKKAYFLGYMVHRLLSASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRL
YAQKFIDRGKDFNLELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFAS
TLSHLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEGAAVGLVKNLALMAYISVGSQ
PSPILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPDQLMATLRKLRRQMDII
VSEVSMVRDIRDREIRIYTDAGRISRPLLIVEGQNLLLKKRHINMLKERDYNNDGWQELV
GSGVVEYIDTLEEETVMIAMSPDDLRQEKEYAYCTTYTHCEIHPAMILGVCASIIPFPDH
NQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGI
NSIVAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKESESKKIGDQEEQFEKPSRLT
CQGMRNAIYDKLDDDGIIAPGIRVSGDDVIIGKTITLPETDDELDSTTKRFTKRDASTFL
RNSETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPF
SCEGLTPDIIINPHAIPSRMTIGHLIECIQGKVSANKGEIGDATPFNDAVNVQKISTLLQ
EYGYQLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPME
GRARDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHICNFCGLIAIANLRNNTFE
CKGCKNKTQISQVRLPYAAKLLFQELMAMNIAPRLMIH
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatatattcggtatagaagacgatcaatatgacgaggaagatgcagacgaaatc
tcgtccaagctctggcaggaggcctgctggatcctcatcaacgcgtacttcgacgaaaag
ggactcgttcgacagcagctggacagctttgatgaatttatcgagatgtccgttcaacgt
atcgtggaggattcgccgcagatcgagctacaggcggaggcgcagcataccacaggcgaa
atcgagaaacctgtaaaacacctattgaaattcgaacagatctatctgtcgaagccgacc
cattgggagaaggacggcgcgccgtcccccatgatgcccaatgaagccagattgagaaac
ttaacttattccgcgccattgtacgtggatattaccaagacgattgagaaggacggcgag
gacccgatcgagacgcagcatcagaaaacgtttattggcaagatacccatcatgttgaga
tccaagtactgtctgcttgccggtctgtctgaccgtgatctgacagaactgaacgagtgc
ccgttagatcccggtgggtattttattatcaatggttcggagaaggtcttgatagcgcag
gaaaaaatggcgacaaacaccgtttacgtattcagcatgaaggatggtaagtacgcctac
aaggcagagattcggtcctgcctggaacacagctcacgccctacctcgactctatggatc
aacatgatggctaagagcggtgccagtattaagaagtccgccatcggtcagcgtatcatc
gccattattccttacatcaagcaggagattcctataatggtagtttttcgggcgcttggc
ttcgttgccgatcgcgacattctcgaacacatcatctacgacttcgacgatcctgagatg
atggagatggtgaagccatccctggatgaggcatttgtcatacaagagcagaacgtcgct
ctgaacttcatcggcacaagaggtgccaagccaggcgtgaccaaagagaaacggatcaag
tacgcccgcgagatcctacaaaaggagatgctaccgcatgtcggcataagcgacttctgc
gagacgaagaaggcctactttcttggctacatggttcacagactgctatcagcgtctcta
ggacgaagagaactggacgatcgcgatcattacggcaacaagagactagacctggccgga
cctttgctggcgtttttattccgcgggctgttcaagaacctgatgaaggaggtgcgcttg
tacgcgcagaaatttatcgatcgtggaaaggactttaatctcgaactggcgatcaagacg
aagatcatcacggacggcttgcggtactcgcttgccacaggcaattggggcgaccagaag
aaggcgcatcaggcgcgagcgggcgtgtcacaggtgttgaaccgactgactttcgcatcg
acgctgtcgcatctgcgacgtgtgaactcaccgatcggtagggacgggaaattggctaaa
ccacgtcaactgcacaatacgctatggggtatgctctgtcccgcggagactccggagggc
gctgccgtcggcctggtaaaaaatctcgcactgatggcgtacataagcgtcggttcgcag
ccctcccctatcctggaattcttggaggagtggtccatggagaatctcgaggagatagcc
ccgagtgcgattgccgacgccacaaagatatttgtcaacggctgttgggtcggtatccat
cgagacccggatcagctaatggccactctgcgcaagttgagacggcagatggacattatc
gtgtcggaggtatcgatggtccgcgatattagagatcgtgagataaggatatacacggac
gctggcaggataagtagacccctgcttatagtggagggtcaaaatttacttttgaagaag
aggcacattaatatgttgaaggaaagagattacaataatgacgggtggcaggaattagta
ggcagtggtgtagtagaatatatagacactctggaagaagagactgttatgatagctatg
tcacctgatgatcttagacaagagaaagagtacgcgtattgtacaacgtacacacactgc
gagattcatccagcaatgattttgggcgtgtgtgcctcaattattccgttccctgatcat
aatcagagccccaggaatacttatcagagtgctatgggtaaacaagccatgggtgtgtat
attacgaattttcacgtgcgaatggatacattggctcacgtattgtattatccacataaa
ccgttggttacaacgagatctatggaataccttagattccgcgaattgccagccggcatt
aacagtatcgtcgcgattctgtgttacacgggatataatcaggaggatagcgttattctg
aatgcaagcgccgtcgaaagggggttcttcagatcagtgttttatcgctcttacaaggag
tctgagtcgaaaaaaattggcgatcaagaagaacaattcgagaaaccatctcgcttgact
tgccagggaatgcgcaacgccatatatgacaaattagatgacgacggcatcatcgcgcct
ggaattcgagtgtcaggcgacgacgtaatcataggaaagacgattactctaccggaaacg
gatgacgagctggatagtacaacaaaacgttttacaaaacgtgacgcgtcgacctttttg
cgaaacagcgaaaccggtatagtcgatcaagtgatgctgactttgaatagcgagggatat
aaattctgcaagattcgagtacgcagtgtgcgtattccacaaatcggagataaattcgcg
tctcgtcacggacagaagggtacatgcggaattcagtacaggcaggaagatatgccgttc
tcttgtgagggcctcacacccgatatcattattaatcctcacgctatcccttctcgtatg
actatcggtcacttgatagaatgcattcaaggaaaagtttccgccaataaaggagagatt
ggtgatgctactccatttaatgatgctgtgaacgtgcaaaagatctctacgcttctgcaa
gaatatggttatcaactgcgaggaaatgaagtgatgtataatggacatacaggtcgtaag
attaatgcacaagtctttttgggaccgacatattatcaacggttgaaacacatggtagac
gataaaatccacagtagagcgagaggacctgtgcaaattttagttagacaacctatggaa
ggtcgagcgagggacggtggacttcgtttcggagaaatggaacgggattgtcaaatttct
cacggagcggcccaatttctacgagaacgtttgttcgaagtgtcagatccatatagaatt
catatttgcaacttctgcggtttaattgctatagcgaatttgcggaacaatactttcgag
tgtaaaggatgtaaaaacaaaacgcaaatttcgcaagttagactaccgtatgcagcaaag
ttacttttccaggaattaatggcaatgaatattgcacccaggctcatgatacattga
DBGET
integrated database retrieval system
