Monomorium pharaonis (pharaoh ant): 105840178
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Entry
105840178 CDS
T05760
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105840178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpha03021
]
105840178
Enzymes [BR:
mpha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105840178
Transcription machinery [BR:
mpha03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
105840178
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
AcetDehyd-dimer
Motif
Other DBs
NCBI-GeneID:
105840178
NCBI-ProteinID:
XP_028048725
LinkDB
All DBs
Position
Unknown
AA seq
1396 aa
AA seq
DB search
MVKEQFRETNIASKVSHISFGVDSTLDMTMQANVQVVHRELYYEDSTRTPFPHGALDKRM
GVSSMGADCETCGKKLSDCVGHFGYLDLELPVFHIGYFKSIIQILQTICKRCAHVLLTRE
ERKFYLRKIENPNLGYLIRKALRKQIWERARKKTECPNCKSYNGPVKKAGFLKIVHEQYK
NLKKTDPIIQEKLTDLGPKMARDKEYKNLIEQNYRCLFDQYLYPNMVQELFNRIPTGDRY
LLLMNPERASPVDLILTRIPVPPVCIRPSVVSDLKDGTNEDYLTMKISELTIINEYIRNR
GTNMENWDYLQLHCGLYINSEISGIPHNMLPKKSGRGIVQRLKGKRGRFRGNLSGKRVDF
TSRTVISPDPNLRIDQVGVPVHIAKILTYPERVIPSNLELMRQLVRNGPDIHPGANYVQY
KSSQNRRYLKYGDRNKVAHDLEPGDIVERHLKDDDLVLFNRQPSLHKLSIMTHRAKILEH
RTFRFNECVCTPYNADFDGDEMNLHCPQTEEARAEALILLANKSNLVTPRNGELLIAATQ
DFITGAYLLTQKDTFLQIEQARLALCLLAGPDASTVVTLPPPAIIKPARLWTGKQIFSLI
IRPNPECPVKANLKTKGKAYTENEELCINDAYVIIRNSELLAGTMDKSVLGSGSKQNIFY
VLLRDWGEDVAITAMWRLTRITNHFNFERGISLGIGDLIPSQGLLKSKEALLQEHYGKCR
GYIKQMEEGRLVCQPGCSEEETLESKILNELSVIRELVGKDCLKELHRTNTPLIMALCGS
KGSFINISQMIACVGQQAINGRRVPDGFENRALPHVLARLKTPDAKGFVENSFYSGLVSK
EFYFHAMGGREGLTDTAVKTAETGYMQRRLIKSLEDLCIHYDMTVRNSMHDRTGSXYGGD
GLDPTYMEGKDCPVDYVRVYDHVRAKMPHKTEEPLSAANVRNATKEMLSSEEYDCLSDEF
KKALTTFLYDSVATKIAHYRKNFKSDAPVVSQLERFTVSQLVEFIHTCKEKYMRAKIEPG
TAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINASPKISTPIITATLI
NQEDPEFAEKVKARIEKTTLGDVAKYIEEIYLPRDHFLKIKLDTDRIKLLKLEIDLQHIK
KKLIASKLKLTEQNITVDKIESTIEIRPNRQSSKDNSNFPFRQLTETIPNIVVKGLPSVN
RVVVHNENLDKTNTYKLFVEGDNFREVMATRGINGEKTTSNNTIEVFKTLGIEAARTTIM
LEIKSVMENHGISIDHRHLMLLADLMTGRGEVLGITRQGLAKMKESVLNLASFEKTADHL
FDAAYYGQKDIICGVSESIIMGLPVPLGTGIFKLLHKADKDEPRTRKLLFDDPQFHKPFR
LGKRLQLARPRPIFQT
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggaacaattcagggagacgaatatcgccagcaaagtctcccatatatctttt
ggagtggacagcacgcttgacatgactatgcaggccaacgtgcaagtggtccatagagaa
ttatactacgaagattcaacacgtactccgtttccacatggagcactcgacaaacgcatg
ggagtgagttccatgggagcagactgtgaaacgtgtggtaaaaagctgagtgactgcgta
ggacactttggatatttggatctagaattaccagtctttcacattggctactttaaatca
atcattcagattttgcaaacaatttgcaagagatgcgctcatgttttactaacacgtgag
gaaagaaaattttatctacgcaaaatagaaaatccaaatttgggatatttaatacgtaag
gcattacgcaaacaaatctgggagagagctaggaaaaaaacggaatgtccaaattgcaag
tcatacaacggacccgtgaaaaaggctggttttctcaaaattgtacatgagcaatataag
aacttaaagaaaacggatcctattattcaagagaaattaactgacttgggtccaaagatg
gcacgtgacaaagaatataagaatttaatagagcaaaactacagatgtctatttgatcaa
tatctgtatccaaacatggttcaagaacttttcaatagaattccaacaggcgataggtat
cttttgttaatgaatcccgagcgcgcttcaccagtagatttaatactgacgaggatcccc
gtaccgccagtttgtattagacctagcgttgtatccgacctgaaagatggcacaaatgaa
gattatctgacaatgaaaatatcagaattaactataattaatgagtatattcgcaataga
ggtactaacatggaaaattgggattatcttcaactccactgtggtctttacattaatagt
gaaatatctggaatacctcacaacatgctacctaaaaagtctggtagaggtatagtacaa
agactcaaaggaaaacgaggtcgttttcgaggtaatttgtctggtaaacgtgtcgatttt
acttctcgcacagtaatttcgcccgatccaaatcttagaatagatcaagttggtgtacct
gtacatattgcaaagattttaacatatcctgaaagggtcattccgtcaaatttagaacta
atgcgacaattagttagaaatggtccagacatacatcctggagcaaactatgtgcaatat
aagagctcgcaaaataggcgatatcttaaatatggcgatcgaaataaagttgcccatgac
ttagagcccggcgatattgtcgaaaggcacctcaaagacgatgacttagtgctgttcaat
cggcaaccgtctttgcacaaattaagcataatgacacacagagccaagatattggagcat
cgaacgtttagattcaatgaatgcgtttgtacaccctacaatgccgattttgatggggat
gaaatgaatctccattgtccacagactgaagaagccagagcggaagcgttaattttgcta
gcaaataagtccaacctggtcacacctcgtaatggtgaattattgatagcagcaactcag
gactttattaccggtgcttatcttttaactcagaaggacacatttcttcagatagagcag
gctagattagctctttgcctcttagccggcccggacgcttctacagtcgtaactcttcct
ccacctgcgataataaagccggcgagattgtggactggcaaacaaatatttagtttaatt
atacgaccgaatccggaatgtcctgtcaaagcaaatctaaagacgaagggtaaggcgtat
accgaaaacgaggaactctgcattaatgacgcctatgttatcattcgtaattcagagctt
ctagcgggaacaatggataaatcggtattgggttcaggatcaaaacaaaatatattttat
gttctactacgcgattggggtgaagatgtagcaatcacagctatgtggcgtttaaccaga
ataacgaaccattttaattttgagagaggaatatctctcggtattggtgatcttatacct
agtcaaggtcttcttaaatccaaggaagcgctgttacaagaacattacggtaaatgcaga
ggttacattaaacaaatggaagaaggccgtcttgtctgtcaacctggatgttcagaagag
gaaacattagaatcgaaaatattaaacgaactttcagtaatccgcgagcttgttggtaaa
gattgcttgaaagaattgcatcgcactaatactcctcttattatggcactttgcggtagt
aagggtagttttatcaacatctctcaaatgattgcttgtgtaggtcaacaagctatcaac
ggacgtagagtgcctgatggattcgaaaatcgtgcattacctcacgttttagcacgatta
aaaacaccggatgctaaaggttttgtggaaaattcattttattctggattagtgtctaag
gaattctactttcatgcaatgggcggtcgagagggtctcacagataccgctgtaaaaact
gcagagactggatatatgcaaagacgattgattaagagcttagaagatttgtgtatccat
tacgacatgacggtgcgtaattcgatgcacgatcgaacaggttccnnatatggcggagat
ggattggatcctacgtacatggagggtaaagattgtcccgtggattatgtcagagtgtac
gatcatgtgagagcgaaaatgcctcataaaaccgaagaacctttaagtgctgctaacgta
aggaacgccacaaaggaaatgctatcatccgaggaatacgattgtctcagtgatgaattt
aaaaaggcattgaccacatttttatacgattctgtggcgacaaaaatagcgcattatcgg
aaaaattttaaatcggatgcaccagtggtctcgcaactggaacgtttcaccgtctcgcag
ttggtagaatttattcacacttgcaaggagaaatacatgagagctaagatagaaccgggt
actgctgtaggcgcactcgctgctcaaagtattggcgagccgggaactcaaatgacactc
aaaacgtttcatttcgctggtgtagcatccatgaacatcacgcagggtgtaccgcgtatt
aaagaaattattaacgcgagtccgaagatcagtactcccattataacagcgacattgatc
aatcaagaggatcctgagtttgccgagaaagtaaaagcacgaatcgagaaaacaactctg
ggagatgtagctaaatatatcgaagaaatatatttgcccagggatcactttcttaaaata
aagttagatactgataggattaaattgttaaaattagaaattgatcttcagcatataaag
aaaaaactcattgcttcaaaattgaaactaacagagcagaatataacggtagataaaatc
gaatctactattgaaattcgaccaaatcggcaaagcagtaaagataattcaaattttcca
tttcgtcaattgaccgagaccattccaaatattgtagtaaagggcttgccatcggtcaat
agagtggttgtacataatgaaaatctagataaaacgaatacatataagttatttgtcgaa
ggtgataatttcagagaagttatggcaacgcgtggtattaacggcgaaaagacgacgtca
aataatactatagaagttttcaaaacgctcgggatagaagcagccagaacaaccattatg
ttagaaattaaatcagtaatggaaaatcatggaatcagtattgatcatcgacatttaatg
ctcttggcagatttaatgactggcagaggagaagtgcttggtattacgaggcaaggttta
gcaaaaatgaaagaatcggttttgaacttggcatcgtttgagaaaacagcagatcatcta
tttgatgcggcttattacggacaaaaagacattatttgtggcgtatcggaatcaatcata
atgggccttccagttccattaggcacgggaatcttcaaattgcttcataaggcagataaa
gatgaaccgcgtactaggaaactactatttgatgatccacaattccacaagccattccgt
cttggaaaacgacttcaactagcacgaccgcgtccaatatttcaaacttag
DBGET
integrated database retrieval system
