Mycoplasmoides pneumoniae 309: MPNA0340
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Entry
MPNA0340 CDS
T01712
Symbol
polC
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
mpm
Mycoplasmoides pneumoniae 309
Pathway
mpm03030
DNA replication
mpm03430
Mismatch repair
mpm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MPNA0340 (polC)
03430 Mismatch repair
MPNA0340 (polC)
03440 Homologous recombination
MPNA0340 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpm03032
]
MPNA0340 (polC)
03400 DNA repair and recombination proteins [BR:
mpm03400
]
MPNA0340 (polC)
Enzymes [BR:
mpm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MPNA0340 (polC)
DNA replication proteins [BR:
mpm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MPNA0340 (polC)
DNA repair and recombination proteins [BR:
mpm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MPNA0340 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
HHH_6
RNase_H_2
DUF655
HHH_3
T2SSK
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
BAL21602
LinkDB
All DBs
Position
complement(36784..41115)
Genome browser
AA seq
1443 aa
AA seq
DB search
MVFDTETEKGKRILALSQFLVKKNILDHNELHQLNNRIELVYLENDRENALFLVALTLKK
PLTIDIWNALYEGFQDVEGAELRITFQEDATFFKDGSTKSSVTLAIIKDYFKSFFGKDKK
YRILLEQELTHPNFLSYSNHELKANCQSQELDQWLIEQRQAFIKWMHQAGFTHFGFVSLF
NPPAEKQLKVKSMKVSKYDKQFETEVFSTEFVPIHKINQQMDEIKLMGQIFELKDFPGYN
NLRNTLNIYVTDFQLGGSLILKWFYKDPKTIEGIKIGTWVKATVKVERDAKTQLLQGIIK
EISPIETPAYYRRPDQDKQKRVELVFHTKMSAFDGINSVQEYAQFAKERDWKTIAVTDKD
NIHIYPTLYEVAKKYGLKAIYGLECNLIDDHIKIVSNPDKTKLKDATFVIFDIETTGLHG
RYDSVIEFAGIKVKHNREVERMQFFLKIDGPLPAAVTEITKITQAQLEDGMEQQAGLEKL
RAWLDGCVMVAHNGLSFDLPFLQTQFEKYNIAPLTNPLIDTLALSWALNPGFASHTLSNI
CAKLKFDFDDERLHRADYDTQALKKVFDYFKEQVELMGITNLEQLDQELNQQCHFELLKR
TFTNTGIIYIKSQSGFAKLYELLSIALTDNNATRPLVLTSTLQKFAKSFVITDNPVQGDI
FKAALTKPLKELEAAIKRVDFVLIAPPDAYAGYTIREGLKKEAIPNAIKLVVDTAQRLNK
LVAVASDAYFIHPWENEYYKAIVCAKGLGGRWHRHFNYKEREQRVPNVFVRTTGEMLNEM
SFLGEQLAYELVVKNTNKLAKQLTADDLVPVQTKLQPPVIEGSNENLAAKTWSQAKAIYG
DPLPKLIEQRIQEELKAIIDNGFGIIYWISHLLVKQSVQDGYFVGPRGSIGSSLVANLIG
ISEINPLVPHYLCESCQYFEVNEEVDDGYDLMVRDCPKCGAKAAFKGDGHNIPFATFMGF
AGDKIPDIDLNFSSEYQAKAHAYVRELFGEQYTFRAGTIATVAEKTAYGYARNYFEIIKQ
TELATAPEIERFKQKLVGIKRTTGQHPGGIMIFPNHKSVYEFTPCGYPADDTSSDWKTTH
FEYDALGDTILKLDILGQDDPTMLKHLADLTHVNPQNIPRFDKKLTEMFWSVNPLKLKPH
YLDEPTGAIGIPEFGTKFVRKILEQTKPKGFGDLIRVSGLSHGKNVWADNAQKILKDQNL
SLKDVIACRDDIMLYLIHKGMQAKDAFEIMEKVRKGIALNAKEVQLMQSNGVEQHWINSC
LKISYLFPKAHAAAYVLMAWRIAWFKLYHPLSYYACLLSFKLKEHDVSGFKSGVSFVKQK
LEELNTLYRIKRIKPKEAELLTSYEVYLEMMARGIKLEQISLTHSHATRFVEHNGILIAP
FITIPGMGEAVANSIIEARNEKPFSSLDDFKKRTKITKKHIEAFTQMQLLDEFREQDNQK
KLF
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atggtattcgacaccgaaaccgaaaagggtaaacgcattttagcattatcacagttttta
gttaagaaaaatattctcgatcacaacgaattgcaccaactcaacaaccggattgaactg
gtttacctcgagaatgatcgcgaaaacgccctgtttctcgtggcgctcactttaaaaaaa
ccgttaacaattgacatttgaaacgccctgtatgagggctttcaggatgtggaaggggca
gaactgaggattaccttccaagaagatgccaccttctttaaggacgggtccactaagtcc
agtgtcaccttagccattatcaaagactacttcaaaagcttctttggtaaggacaagaag
taccgcatcctgttagagcaagagttaacccatcctaacttcttgtcctacagtaaccat
gaactgaaagctaactgccagtcccaagaattagaccaatggttaattgaacaacgccaa
gccttcattaagtggatgcaccaagctgggtttacccactttggttttgtctcgttgttt
aatccaccagcggaaaaacaactaaaagtgaaatcaatgaaggtatccaagtacgacaag
cagtttgaaaccgaggtctttagtacggaatttgtccccattcacaagattaaccaacaa
atggatgagatcaaactaatggggcaaatctttgagttaaaggactttcctgggtacaac
aacctccgtaatacccttaatatttatgtcactgatttccaactaggtggttcgttaatt
ttgaagtggttttacaaggatcccaaaacaattgagggcattaagattggtacctgagtt
aaggccacggttaaggtcgaacgtgatgccaagacccaactactccagggtatcattaag
gaaatttccccgattgaaacccccgcttactatcgccgccccgatcaggacaaacaaaaa
cgggtcgaattagttttccacaccaagatgagtgcctttgatggcattaacagtgtccag
gaatacgcccagtttgccaaagaacgcgattggaagacaattgctgtcactgacaaggac
aacattcacatttatcccactttatatgaagtggccaaaaagtacggcttgaaggccatt
tatggtttggaatgtaacctcattgatgatcacattaagatagttagcaatcctgataaa
accaaacttaaggatgcgacctttgtcatcttcgacattgaaacaactgggttacacggt
cggtatgactcggtgattgagtttgcgggaattaaggtcaaacataaccgtgaagtggaa
cgaatgcagttctttctcaagattgatggacccttacctgcagcagttaccgaaattacc
aagattacccaagcacaactagaagatgggatggaacagcaagcggggttggaaaaactg
cgcgcttgactagatggttgtgtaatggtagcccataacggtttgagttttgacttgccc
tttttacaaacccagtttgaaaaatacaacattgcgccactaaccaatcccttaattgat
accttagccttatcctgggccttaaatcccgggtttgcctcccatacgttgagcaatatt
tgtgccaagctcaagtttgactttgatgatgaacgattgcaccgagcggattatgatacc
caggccttaaagaaggtctttgactacttcaaggaacaggtcgaactcatggggattact
aatctcgagcagttagaccaagagttaaaccagcagtgccactttgaactgctcaagcgc
acttttaccaataccggcattatctacattaagagccaaagtgggtttgctaaactgtat
gaactgttatcaattgcgctcaccgataacaacgctactcgacccctagtgttaacttca
acactccaaaagtttgctaaatcctttgtcattactgataacccggtgcaaggtgatatc
tttaaagcggcattgactaaaccgcttaaagaattagaagcggccattaaaagagttgac
tttgttttaattgccccacctgatgcttatgctggttacaccatcagggaaggtttgaaa
aaagaagccattcctaacgcaattaagttagtggtggacacggcccaaagactcaataag
ttagtggcagttgcctcggatgcttactttattcacccctgggagaatgagtactataag
gccatagtttgtgccaagggtctgggtgggcgttgacaccgtcactttaactataaggaa
agggaacaacgggttcccaatgtgtttgtgcgtaccacaggggaaatgctcaatgaaatg
agttttttaggcgaacaattagcttacgagttagtggtcaaaaacaccaataagttagcg
aaacaactcaccgctgatgacctggtaccagtgcaaaccaaactccaaccaccagtaatt
gaaggttctaacgaaaacctggcagccaaaacctggagtcaagccaaggccatttacggt
gatcccttacctaagttaatagaacaacggatccaggaagagttaaaagcgatcattgac
aatggctttggcattatttactggatttcccatttactagtcaaacaatcggttcaagat
ggttactttgttggaccgcggggttcaattggttcttcgttggtagctaacctgattggt
atctcggaaattaatcccttagtgccgcattatctctgtgagagctgtcagtactttgag
gtcaacgaagaggtcgatgatgggtatgacctcatggtaagggattgtccaaagtgtggt
gccaaagcagcctttaagggtgatggtcataacattccctttgctacctttatgggtttt
gctggggacaagattcccgatattgacttaaacttttccagtgagtaccaagccaaagcc
catgcttatgtgagggaactgtttggtgaacagtacaccttccgtgctggcacaattgcg
acagtggccgaaaaaacggcttacgggtatgcgcgcaactactttgaaattattaaacaa
accgaattggccaccgctcccgaaattgaacgctttaagcaaaagttagtcgggattaaa
cgcacgaccggccaacaccccggggggattatgatcttccccaaccacaaatcggtatat
gagtttaccccgtgtggttatccagctgatgatacttccagtgattgaaaaacgacccac
tttgaatatgatgcgttaggggacaccatcttaaagttagatattctgggccaggatgat
ccgactatgttaaagcacctggccgatcttacccatgtcaatccacaaaacattccccgg
tttgacaagaagctcaccgaaatgttttggtcggtcaatcccttaaaactaaaaccgcac
tacttagatgaacccacgggagcgattgggattcccgagtttggtactaagttcgttcgc
aagatcttggaacaaaccaaaccaaagggctttggtgacctcattcgcgtctcgggtcta
agtcacgggaagaacgtgtgggcggacaatgcgcagaaaatcttgaaggaccaaaactta
agcttaaaggatgtaattgcctgtcgcgatgacattatgctctacctcattcataagggg
atgcaggccaaagatgcttttgagatcatggaaaaggtgcgtaagggaattgctctcaat
gccaaggaagtgcaattaatgcagagcaatggggtcgaacaacactggattaattcgtgt
ttaaagattagctacctgttcccgaaagcccacgccgcggcttatgttttaatggcctga
cgaattgcctggttcaaactgtaccacccgttgagctactatgcttgtttgttgagcttt
aaactcaaggaacatgatgtcagtggttttaaatcaggtgtgagctttgtcaagcaaaaa
ctagaggagctcaacacactgtaccgcattaaacggattaaacccaaagaagcagaactg
ttaaccagttacgaggtttatttagagatgatggcccgcggcattaaactagaacaaatc
tctttaacccactcccacgccactcgttttgtcgagcacaacggcattctaattgcccct
tttattacgattccggggatgggggaagctgtggccaattcgatcatagaagcgcgtaac
gaaaagccctttagttcgctcgatgactttaaaaaacgcactaaaattaccaaaaaacac
attgaagcgtttacccaaatgcaactactcgatgagtttagggagcaagacaaccagaaa
aaacttttttag
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