KEGG   Micromonas pusilla: MICPUCDRAFT_55164
Entry
MICPUCDRAFT_55164 CDS       T02696                                 
Symbol
JGI:MicpuC2_55164
Name
(RefSeq) uncharacterized protein
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
mpp  Micromonas pusilla
Pathway
mpp03020  RNA polymerase
mpp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mpp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MICPUCDRAFT_55164 (JGI:MicpuC2_55164)
  09124 Replication and repair
   03420 Nucleotide excision repair
    MICPUCDRAFT_55164 (JGI:MicpuC2_55164)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mpp03021]
    MICPUCDRAFT_55164 (JGI:MicpuC2_55164)
   03400 DNA repair and recombination proteins [BR:mpp03400]
    MICPUCDRAFT_55164 (JGI:MicpuC2_55164)
Transcription machinery [BR:mpp03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     MICPUCDRAFT_55164 (JGI:MicpuC2_55164)
  RNA polymerase III system
   RNA polymerase III
     MICPUCDRAFT_55164 (JGI:MicpuC2_55164)
  RNA polymerase I system
   RNA polymerase I
     MICPUCDRAFT_55164 (JGI:MicpuC2_55164)
DNA repair and recombination proteins [BR:mpp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      MICPUCDRAFT_55164 (JGI:MicpuC2_55164)
SSDB
Motif
Pfam: DNA_RNApol_7kD YjdM_Zn_Ribbon zinc_ribbon_13 zf-ribbon_3 Prok-RING_1 LysW-like_globular GFA
Other DBs
NCBI-GeneID: 9681908
NCBI-ProteinID: XP_003055905
JGI: 55164
UniProt: C1MJZ8
LinkDB
Position
Unknown
AA seq 96 aa
MMLTPRTQASFTTAVVSEFQVKTSSGVLALHNFLSTCVNFADCGSEVMLRPGDIVICREC
GYRILYKKRTKQSAFTLLCSRSHDDIFSAVVQFEAR
NT seq 291 nt   +upstreamnt  +downstreamnt
atgatgcttacgcccagaacacaggcgtcatttacaactgcggtggtaagtgaatttcaa
gttaaaacaagttctggcgtgttagcactccacaatttcttaagcacttgtgtaaatttt
gcagattgcggatctgaagtgatgttacgcccgggtgatattgtgatctgtcgtgaatgc
ggctatcgtatactgtataagaagcgcacgaagcagagtgcgtttacattgttatgttct
cgatcacacgatgatattttctctgcagttgtccagtttgaagcacgataa

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