Marinomonas profundi: J8N69_03800
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Entry
J8N69_03800 CDS
T07858
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
mprf
Marinomonas profundi
Pathway
mprf00540
Lipopolysaccharide biosynthesis
mprf01100
Metabolic pathways
mprf01250
Biosynthesis of nucleotide sugars
Module
mprf_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
mprf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
J8N69_03800 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
mprf01005
]
J8N69_03800 (rfaD)
Enzymes [BR:
mprf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
J8N69_03800 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
mprf01005
]
Core region
J8N69_03800 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
ThiF
KR
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
UDV03907
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All DBs
Position
820011..820958
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AA seq
315 aa
AA seq
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MYIVTGGAGFIGSNIIKALNNKGIKNILLVDDLTDGKKCLNLSDLDIADYMDMYDFLDAI
KQDTLGINPIAVFHEGACSATTEWNGKYVMDVNYQYSKAVLDFCLKHGAPFSYASSASVY
GSGPVFQESRENEKPLNMYAYSKFQFDQYIRAILPNAKSQIVGFRYFNVYGPREQHKGSM
ASVAFHLRNQVLADENPKLFGAYDGYEAGGQSRDFIYVEDLVNTKLWFLENPEQSGIFNL
GTGKAEPFRTIAETVIAHYEKGEIEYIPFPEQLKGAYQSFTQADISKLRNAGYNGSFRGL
AQGVQDYLGWLDTHG
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtatatagttactggcggtgccggatttattggcagcaatatcatcaaagccttaaac
aacaaaggcattaaaaacattcttctagtggatgatttgacggacggcaaaaaatgcctc
aatttatccgatcttgatattgccgattacatggatatgtacgatttcttagacgctatc
aagcaggatacattgggcattaatcccattgcggtgttccatgaaggcgcgtgctcagcg
accacagaatggaacggcaaatatgtcatggatgtgaattatcaatattcaaaagcggta
ttggatttctgcctaaagcatggcgcccccttctcttatgcatcttccgcctctgtgtat
ggttctggccctgttttccaagagtcccgtgaaaacgaaaagccacttaacatgtacgcc
tattccaagtttcagttcgaccaatacattcgcgcgatcttaccaaacgcaaaaagccaa
attgtggggtttcgctacttcaacgtctatggacctcgtgaacaacacaaaggcagcatg
gccagtgtcgcctttcatcttcgtaatcaagtgcttgcagatgagaaccccaaattattt
ggtgcctatgatggctatgaagcaggcggacaaagccgagatttcatttacgttgaagat
ttggtgaataccaaactttggttcctcgagaaccctgaacaatctggcattttcaatcta
ggcacaggcaaagccgagccttttcgcaccatagccgaaaccgtcattgcgcattacgaa
aaaggcgagatcgaatacattcccttcccagaacagctaaaaggagcgtatcaaagcttc
acgcaagcggacatcagcaaactacgcaatgcgggttataacggcagcttccgtggcttg
gcgcaaggcgttcaagattacttaggttggctcgatacacatggctaa
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