Microbacterium rhizosphaerae: SM116_12230
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Entry
SM116_12230 CDS
T09585
Name
(GenBank) isoprenyl transferase
KO
K12503
short-chain Z-isoprenyl diphosphate synthase [EC:
2.5.1.68
]
Organism
mrg
Microbacterium rhizosphaerae
Pathway
mrg00900
Terpenoid backbone biosynthesis
mrg01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
mrg00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SM116_12230
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mrg01006
]
SM116_12230
Enzymes [BR:
mrg01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.68 (2Z,6E)-farnesyl diphosphate synthase
SM116_12230
Prenyltransferases [BR:
mrg01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
SM116_12230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prenyltransf
Motif
Other DBs
NCBI-ProteinID:
WPR88540
LinkDB
All DBs
Position
complement(2697222..2698007)
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AA seq
261 aa
AA seq
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MTRDRANAGQGPLYRLYINRLRRGLAPESVPHHVAMMIDGNRRWARQLGYQSAADGHRAG
AAKMQEFLRWCDGVGVKVVSLYLLSTDNVRKRDAVELSDLNDIIAQLADEISRVPGWRIK
HVGRAELLPPELLRVLREAEARTKDNTGLHVNLAVGYGGRSEIVDAVRSIIAQHDATGGS
LEELAASLTPEQIGEHLYTGGQPDPDLVIRTSGEQRLSDFLLWQSAHSEFYFVEALGPDL
REVDFLRAIRDYGSRDRRYGS
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcgcgaccgggccaacgcggggcagggccccctctaccggctctacatcaaccgg
ttgcgccggggcctcgcccccgagtcggtgccccaccatgtcgcgatgatgatcgacggc
aatcgccgctgggcgcggcagctgggctaccagtcggcggccgacggccaccgcgccgga
gccgcgaagatgcaggagttcctgcgctggtgcgacggcgtcggcgtgaaggtggtctcg
ctgtatctgctctccaccgacaacgtgcgcaagcgcgacgccgtcgagctctccgatctg
aacgacatcatcgcccagctcgcagacgagatctcacgagtcccgggctggcggatcaag
cacgtaggccgcgccgagctgctgccccccgaactgctccgcgtgctgcgcgaggcggag
gcgcgcaccaaggacaacaccgggctgcacgtcaacctcgccgtcggatacggcggccgc
agcgagatcgtcgacgcggtgcgcagcatcatcgcgcagcacgacgccaccggcggctct
ctggaggagctcgccgcgagcttgacccctgagcagatcggcgagcacctctacaccggc
ggccagccggaccccgatctcgtcatccggacctccggtgagcagcggctgagcgacttc
ctcctgtggcagtcggcgcatagcgagttctacttcgtcgaggctctgggtccggatctg
cgcgaggtggacttcctccgggcgatccgcgactacggctcccgcgatcgccgctacggc
agctga
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