Marinomonas rhizomae: KDW99_13300
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Entry
KDW99_13300 CDS
T08610
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
mrhi
Marinomonas rhizomae
Pathway
mrhi00071
Fatty acid degradation
mrhi00280
Valine, leucine and isoleucine degradation
mrhi00310
Lysine degradation
mrhi00362
Benzoate degradation
mrhi00380
Tryptophan metabolism
mrhi00410
beta-Alanine metabolism
mrhi00640
Propanoate metabolism
mrhi00650
Butanoate metabolism
mrhi00907
Pinene, camphor and geraniol degradation
mrhi00930
Caprolactam degradation
mrhi01100
Metabolic pathways
mrhi01110
Biosynthesis of secondary metabolites
mrhi01120
Microbial metabolism in diverse environments
mrhi01200
Carbon metabolism
mrhi01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
mrhi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
KDW99_13300 (fadB)
00650 Butanoate metabolism
KDW99_13300 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
KDW99_13300 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
KDW99_13300 (fadB)
00310 Lysine degradation
KDW99_13300 (fadB)
00380 Tryptophan metabolism
KDW99_13300 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
KDW99_13300 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
KDW99_13300 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
KDW99_13300 (fadB)
00930 Caprolactam degradation
KDW99_13300 (fadB)
Enzymes [BR:
mrhi01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
KDW99_13300 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
KDW99_13300 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
KDW99_13300 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
KDW99_13300 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
UTV98240
LinkDB
All DBs
Position
complement(2825797..2827947)
Genome browser
AA seq
716 aa
AA seq
DB search
MIFEGQAIKVAVDDASVATVTLDLVGESVNKFNSLTLNELAEAVNALKHIDDLQGVIFAS
AKDVFVVGADITEFTSWFKLEDDDLSDKLRHAHSIFNDISNLCCPTVAAINGIALGGGME
LALACDYRVMATTAKIGLPETQLGIYPGWGGTVRLPRLIGADNACEWICGGAQKRSEDAF
KDGAVDAVVPAAKVNESARHLVQQVLDGKLDYHARRNELRAPMEFTPIEKMMVFESVRGV
VGAKAGKHYPAPMAAIKTIEKGISQEMEKALDTEIKGFVKLAKGPVAKSLVNLFLSDQQI
KKTAGKYAKNATPVKQAAVLGAGIMGGGVAYQSASKGTPIIMKDIRPEALELGLSEANKL
FNGQVERGRLTTEKAFKAMNAIVPALSYGEFDHVDLVVEAVVENVKIKKSVLAEVESKIA
DDAILTSNTSTISITELAKDLKRPENFCGMHFFNPVHRMPLVEVIRGEKTSDAAIAKTVA
YAQAMGKTPVVVNDCPGFLVNRVLFPYFAGFSLMMQEGADFQVVDKTMEKFGWPMGPAYL
LDVVGVDTAYHADQVMAEGFPDRMKHEGTNAVDRLFELERFGQKNGKGFYTYEPDRKGKP
KKIFNEEIDVLLSSVVVSKSELSEDDIVARMMIPLCIETVRCLEENIVASPAEADMGLIY
GIGFPPYLGGALHYLDQMGLQAFCDLADKYSHLGKLYEPTAKMRDMAKNNDTYYGA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgattttcgaaggacaagcaatcaaggttgcagtcgatgatgccagtgtggcaaccgtc
actctggatttggtcggtgagtcggtcaataaattcaatagccttaccttgaatgaattg
gccgaagccgttaatgcccttaaacacattgatgatctacaaggcgttatttttgccagt
gcaaaagacgttttcgtcgtgggcgcagacattacagaatttacttcttggttcaaacta
gaggacgatgatctatccgataaattgcgtcatgcccacagtatttttaatgatatatcg
aatctatgttgtccaacggtagcagccattaatggtatcgcacttggcggcggtatggag
ttagcgttggcgtgtgattatcgagttatggcaacgacagcaaaaataggtttaccggaa
acgcaattgggcatttaccctggttgggggggaacggttcgtttacctcgtctgattggt
gcggataatgcttgtgagtggatttgtggtggtgctcagaaacgcagcgaagatgctttt
aaagacggtgcggtagatgcggttgttcctgcggcgaaagtcaatgaatctgctcgtcac
cttgttcaacaagtgttggatggcaagctcgattatcatgctcgtcgtaatgaattgcgt
gcaccgatggaatttacacctatcgaaaaaatgatggtcttcgaatcggttcgcggtgtg
gttggcgcaaaagcgggtaagcattacccagcacctatggcagcgattaaaaccattgaa
aaaggcattagccaagagatggaaaaagcccttgatactgaaatcaaaggctttgtaaag
ctagctaaaggaccagtagcgaaatctttggttaacttattcttaagtgatcagcagatt
aagaaaaccgcaggtaaatatgcgaaaaatgcgacgcctgtgaaacaagccgctgtatta
ggtgcgggtattatgggtggcggtgttgcctatcaatccgcgtcaaaaggcacaccgatt
atcatgaaagatattcgtcctgaagccctagaattgggcttgagtgaagccaataagctg
ttcaatggccaagtcgagcgcggacgcttaacgaccgaaaaagcctttaaagccatgaac
gcaatagttcctgcattgagctatggtgaatttgatcacgttgatctagttgtcgaagcg
gtggttgaaaacgttaaaattaaaaagtcagtattggctgaagtcgaaagtaaaattgcc
gacgacgctattctgacctctaacacgtcaactatctctattactgaattggcaaaggat
ttaaaacgcccagaaaacttctgtggtatgcatttctttaacccagtccatcgtatgcct
ttggtggaagttattcgcggtgaaaaaaccagcgatgcagctatcgccaaaaccgttgct
tatgcccaagcgatgggtaaaacaccggttgtggtaaatgattgcccaggattcttggtg
aaccgcgtattgttcccttacttcgctggtttctctttgatgatgcaagaaggcgcggat
ttccaagtggttgataaaaccatggaaaaattcggttggccgatggggcctgcgtatttg
ctggatgttgttggtgtcgacacggcttatcatgcagatcaggttatggctgaaggcttc
ccagatcgtatgaagcacgaaggcactaatgcggttgatcgtttgtttgaactggaacga
tttggtcagaaaaacggcaaaggtttttatacctatgagccagaccgtaaaggcaagcct
aagaagatctttaatgaagagatagatgttttgctttcctctgtggtggtatctaaatct
gagttaagcgaagacgatattgtcgctcgtatgatgattccactttgtattgagacagta
cgttgtcttgaagagaatatagtggcatcgccagcagaagcggacatgggattgatttat
ggtattggtttccctccataccttggcggtgcattgcactacctagaccaaatgggactg
caggctttttgtgaccttgcagacaaatacagccacttaggtaagttgtatgagccaacc
gcaaaaatgcgtgacatggcgaaaaacaacgacacttattacggcgcataa
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