Moniliophthora roreri: Moror_15188
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Entry
Moror_15188 CDS
T03137
Name
(GenBank) pre-mrna cleavage complex ii protein clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
mrr
Moniliophthora roreri
Pathway
mrr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mrr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Moror_15188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrr03019
]
Moror_15188
Enzymes [BR:
mrr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
Moror_15188
Messenger RNA biogenesis [BR:
mrr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
Moror_15188
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
ATP_bind_1
nSTAND3
AAA_16
AAA_24
MMR_HSR1
PduV-EutP
ATPase_2
SRPRB
Motif
Other DBs
NCBI-ProteinID:
ESK86739
UniProt:
V2Y509
LinkDB
All DBs
AA seq
486 aa
AA seq
DB search
MSEESSKEWILEAETEYRFELDPGTSLAITLVRGDAEVFGAEMVEGKAYLFGKECKAAVF
TWIGCTLKMSQPSTEYVSEETPMAAYGNLHIAFEQMRVRALRKFRGSPDPDGGRGLDKDP
PRVLVLGPENSGKTTLCKTLINYAVRAGQGWSPLLVNVDPSEGAWAAPGALSAAPVHSPL
PTSSPTFPLGSAASSAPTSLGANALLPLVYWYGHSNVARNALLMDRLIRNLGLNANNKFE
NDTKGSAAGLIIDTPSSFAPGTAATNEHRQKLIKACIEAFKINVILVVGHEKLNVEMQRT
YGNILKVVKVPKSGGVVELDHGYRERIHNYQLHGYMYGEVIPPPTGLPSGVTPSQGGEAL
TDLTLSPSSMVINFSDLTIYRIGAETMAPSSALPIGATRVISEMQPVLVDPAQPGSGLLN
AILAVLAPFSPDENERYDEEILDLTVIGFIAITNLDVAHKKMTVLAPSQGSLAGRTAIVG
SYEWQE
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagagtcaagcaaagaatggattttagaagcagaaacggagtatagattcgaa
cttgaccctggaacttccctcgcgatcactcttgttcgcggagatgctgaggtctttggg
gctgagatggtcgagggtaaagcgtatctgtttgggaaggagtgcaaagcggcagttttc
acttggattggatgcacactgaagatgagccaaccttccacggaatatgtctcagaagaa
accccaatggctgcgtacgggaacctccacatagcatttgaacaaatgcgagtccgcgct
ttaaggaaatttcgtggatccccggacccagacgggggaagagggcttgataaggatcca
ccgagagtgctcgttttaggtcccgagaactctggcaagactactctttgcaagacgttg
atcaactacgcagtacgcgccggccagggttggtctccacttcttgtcaatgtcgatcct
agtgagggtgcatgggcggctcctggggctctgtcagctgcacctgtacacagcccgctt
ccaacctcgtctccgacgtttccattgggctctgctgcttcctctgctccaactagtttg
ggcgcaaacgccctgcttccgctcgtctactggtacggccactcgaacgttgccagaaac
gcgttgttaatggatagactgatccgaaatctcggtctcaatgccaataacaagtttgag
aacgacaccaaaggttcggcggctggtctgatcatcgacacgccatcctcgtttgctccg
gggaccgcagcgacaaatgaacaccggcagaagctcatcaaggcgtgtatcgaagcattc
aagatcaatgtcattcttgttgtaggacacgagaagctaaatgtcgagatgcagcgtacc
tacgggaatattctcaaagtagtcaaggtcccgaaatctggtggcgttgttgaactagat
cacggctatagagagcgcatacacaactaccaactccacgggtatatgtatggtgaagtc
ataccaccccctactgggcttccgtctggcgtcacaccttcgcaaggaggcgaggcactc
acagatctcactttgtcgccgtcctcgatggtaatcaacttcagcgatctgaccatctat
cggatcggcgcagaaactatggcaccctcgtccgcgcttccgattggcgcgacacgtgtc
atctccgagatgcagccagttctcgtggatcccgctcaaccaggctcaggcttgttgaac
gcaatactagcggtccttgcaccatttagcccggatgaaaatgaacgttacgacgaggag
atactggatctgactgtgataggcttcattgctatcacaaacctcgacgtcgctcataaa
aagatgactgtgcttgcgccgtcgcagggctctctcgcaggaaggacggctatagtcggg
tcttacgagtggcaagagtaa
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