Malassezia restricta: MRET_2800
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Entry
MRET_2800 CDS
T06113
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
mrt
Malassezia restricta
Pathway
mrt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MRET_2800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrt03021
]
MRET_2800
Enzymes [BR:
mrt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MRET_2800
Transcription machinery [BR:
mrt03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
MRET_2800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
LcrG
Motif
Other DBs
NCBI-GeneID:
38739566
NCBI-ProteinID:
XP_027485248
LinkDB
All DBs
Position
IV:complement(783351..788435)
Genome browser
AA seq
1694 aa
AA seq
DB search
MDITRAITSHVKSASFSFLTAEEVRSISVRQVVNPVLLDNANAPTEGGLYDPAFGPMRLD
DICQTCHMNHFDCPGHFGHIELPAPVFHPLFMNHAYTLLRGTCLYCHHFRISSMALAKYA
AQFRLLEYGLVDEAHKMASEQLRGVPNTDGDEDEPLAQATQAPAAETVPEFVERISSTVR
TIIARAEKRGLRRHADKGMATYAARRDLRNVFLKDILRRRCDRCSAVNPTLRKDGFVKIT
ERDLSARDHAIHEARGIKRPNVLLDRTSAQAENATETESTMTLKEARKLSKEAGDHTRVV
PPSECRANLRRLFAKEREICALVFGRHPMFGGKAAPSADVFFMEVVCVTPTRFRPASVMG
DQTFENAQNELLTKVLNTTFYVRDCNDRAQLFQRKTNYPVLDGLDDGQAVAVQRQWELDR
RAAMDALLSAMVQLQVSVNCYIDSSKNPSPQRQGQAATPGVKQGLEKKEGLFRKHMMGKR
VNHAARSVISPDVNIETNEIGVPPVFAKRLTYPEPVTVHNYELMRQLVIHGPDVYPGAHA
VRAEDGTETLLKNLSVEERTALANQLLTPQGQTSRQARGTFGGVGGTLRTPVTNKQVLRH
LRTGDILVMNRQPTLHKPSMMAHRARVLQGERTIRMHYANCNSYNADFDGDEMNMHFPQS
QMARAECYHIANTDNQYLVPTSGNPLRGLIQDHVVGGVWMTSKNTLYTRDEYQQLIFGAL
RPETYGFGGRIRTLPPAIFRPVPRWTGKQVISTILLNVTPPHAQGLNMNAKARVGAKYWG
EQHKEEEVVVVRDGELLTGVLDKSQIGASAYGLVHAVYEIYGAETAGRLLSIFSRLFTMW
LQHNAFSCRMDDLLLSADGDAKRRELLMAGAQHGLEAALGNVGLGDEDKHAPETQYNLRV
RLEEVLRDDNKLAALDAAMMSASNKLTSSVISSCIPSGLWRVFPENNMQMMAVSGAKGSA
VNVSSISCLLGPQALEGRRVPVMVSGKTLPSFKAFETAARAGGFVAGRFLTGIAPQEYYF
HCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGISVQYDQTVRNSDGFVLQFHYGEDALDV
TKSKYLDRFDFTVQNFESYRRRYNPVQLEATMEVEKAPDHMKRALKKPHKYAPTMSVYSP
ARHFGSMSETFAQKVEDYVAKNPHGLLARKKKDTTPEGVPMQLARPKLSAEAFKAMTKVL
YHRGLVEPGENVGLLAAQGIGEPSTQMTLNTFHFAGHGAANVTLGIPRLREIVMTASKDI
KTPVMRLPVLAGVTDEQMRTFCKDGSRLVLSQIIEEAIVTERVLPKTAANGYQRQKQYTV
RLQFYPADEVREEYNASTEHVLRGLEATFVPLVEREIVRELKRLRRDQVRQSQSIGQGQS
FSESAEEEAPAARRREDDSDDEENVSEAGDDDDATAAKRRANAGSKVSYDDDAEDATDTA
DDIARAFNDEQADEEEQEPEEQEEAMETRVSDLGERLQNESKFVVGFRFDSAQGSWAEFD
LQMLNSTEKMLLINVIERVCRASVVHEIPRVSRIMIPPPTPGDSSVALMAEGINLRGMWD
FGFGVIDLNRMYTNDIGALLHNYGVEAARAAIVSELKGIFDTYGIGVSMRHMFLIADYQT
AFGDFRPFSRGGLADAPSPLLKASFEMTMAFLSGAALFQEADDLSSPSSNIVVGRPVPTG
TGATTIHMPLTASA
NT seq
5085 nt
NT seq
+upstream
nt +downstream
nt
atggacataacgcgtgcgattacgtcgcacgtcaagtccgcctcattctccttcctgacc
gccgaggaggtgcgaagcatctcggtgcgtcaggtggtgaatcccgtgctgcttgacaat
gctaatgcaccgaccgagggcggtttgtacgacccggcctttggtcctatgcgtctggat
gatatttgccagacgtgccatatgaatcactttgattgccctggacacttcggacatatt
gagctgcctgcgcccgtgtttcatcctctgttcatgaaccatgcatacacactcttgcgt
ggcacgtgtctgtattgccaccactttcgaatctcgagcatggcgctggccaagtacgcg
gcgcagttccgcctgcttgagtatggtctcgtggatgaggcacacaagatggcgtccgag
cagctgcgtggcgtcccaaacaccgatggcgacgaagacgagcccctggcacaggcgaca
caagccccagcggccgagacggtgcccgagtttgtcgagcgcatttcgtctacagtgcgc
acgatcatagcacgtgcagagaagcgcggcctgcgccggcatgccgacaagggcatggcg
acgtatgcggctcgtcgcgatctgcgcaacgtgttcctcaaggatattttgcgccgccgc
tgcgaccgatgcagtgctgtgaacccgacgctgcgaaaagatggctttgtgaaaatcacc
gagcgtgacctgtccgcacgcgaccatgcgatccacgaggctcgcggcatcaagcggccg
aacgtgctgctggaccggacgtcggcacaggccgaaaacgccaccgagaccgagtcgacc
atgaccctcaaggaggcacgtaaactaagcaaggaggccggtgaccatacccgtgtggtg
ccgccaagcgagtgccgtgcgaatctgcggcgtctgtttgccaaggagcgtgagatttgt
gcgctcgtgtttggtcggcatcccatgtttggcggcaaagcggcgccaagtgccgatgta
ttcttcatggaggtcgtgtgtgtgacaccgacgcgcttccgcccagcaagtgtgatgggc
gaccagacgtttgagaatgcacagaacgaactgctgaccaaggtgctgaatacgacattc
tacgtgcgtgactgtaacgaccgtgctcagctctttcagcgtaaaacgaactatcctgtg
ctggacggactggacgacggacaggccgtcgccgtgcagcggcagtgggagctcgaccgg
cgcgcagcgatggatgcgctcctctcggcgatggtgcagctgcaggtcagtgtgaactgc
tacatcgactcgagcaagaacccgtcaccacagcgtcagggccaggcagcgacaccaggc
gttaagcagggtctcgaaaagaaagagggtctgttccgcaagcacatgatgggcaagcgt
gtgaaccatgcggcccgctcagtcatttcgcccgatgtgaatatcgagacgaacgagatt
ggtgtgcctcctgtgtttgcgaagcgactgacataccccgagccagtgacggtacacaac
tacgagctcatgcgccaactggtgattcacggtccggacgtgtaccctggagcacacgct
gttcgagccgaagacggcaccgagacgttgctcaagaacctgagtgtcgaggagcgcact
gcgcttgcaaaccagctgctgacaccgcagggccaaacgtcgcgtcaggcgcgcggcacg
tttggcggcgtcggtggcacgttgcggacgcccgtgacaaacaagcaagtgctgcgccac
ctgcgcacgggtgatattctcgtgatgaatcgccagccgacgctgcacaagccgtccatg
atggcgcatcgtgcgcgtgtgctgcagggtgagaggacgatccgcatgcactatgcgaac
tgcaactcgtacaatgcagactttgacggtgacgagatgaacatgcacttcccgcagagc
cagatggcccgcgctgaatgctaccatattgccaacacggacaaccagtaccttgtgccg
acgagtggcaatccactgcgcggtctcatccaggaccatgtcgtcggtggtgtgtggatg
acgtcgaagaatacactgtatacccgcgacgagtaccagcagctcatctttggcgcactg
cgacccgagacctacggctttggtggtcgcatccgtacgctcccgcccgccatctttcga
cccgtgccgcggtggacaggcaagcaggtgatctcgaccattctgctgaacgtgacgccg
ccgcatgcccagggcctgaacatgaatgccaaggcacgcgtgggcgccaagtactggggc
gagcagcacaaagaagaggaagttgtcgttgtgcgcgacggcgagctcttgacaggtgtg
ctggacaagtcgcagatcggtgcatcggcgtacggtcttgtgcatgcggtgtacgaaatc
tacggcgccgaaacggcagggcgcttgctgtccatcttctcccgcctgtttaccatgtgg
ctgcagcacaatgcgttctcgtgtcgcatggatgatctgcttctcagtgcagacggagat
gccaagcggcgggagctgctcatggcgggagcacagcatggtctcgaggcggcgctgggc
aacgtcggtctcggtgatgaagacaagcatgcgcctgagacacagtacaatctgcgcgtg
cgtctcgaggaagtgctgcgggacgacaacaagctggcggccctcgatgcagcgatgatg
tcggcgtccaacaagctgacgtcctcggtgatctcgtcctgcatcccatcgggtctgtgg
cgcgtgttcccagagaacaatatgcaaatgatggcggtgtcaggtgccaagggcagtgcc
gtcaacgtatcatcgatctcgtgcctgctcggcccacaggccctggagggacgccgcgta
cccgtcatggtcagtggcaagacgctgccatcgttcaaggcgtttgagacggccgcacgt
gccggtggcttcgtcgccggccgcttcttgacaggtatcgcgccccaggagtactacttc
cattgtatggccggtcgtgaaggtctgatcgacacggccgtcaagacatcgcgctcaggg
tacctgcagcgctgcttgatcaagcatctcgagggcatttctgtgcagtacgatcagaca
gtgcgcaacagcgacggcttcgtgctccagttccactacggtgaagacgctttggacgtc
accaaaagcaaatatctcgatcgcttcgactttactgtgcaaaactttgaaagctatcgc
cgtcgctacaaccccgtgcagctggaggcgacgatggaggtcgagaaagcccctgatcac
atgaagcgcgcgctgaagaagccacacaagtatgcccccaccatgtcggtatattccccg
gcgcgacactttggctccatgtcagagacatttgcccagaaggtggaggattatgtggct
aagaatccacatggcctccttgcccgcaagaagaaggataccacgcctgagggcgtgcca
atgcaactcgcacggcccaagctaagtgctgaggctttcaaagcgatgaccaaggtgctg
taccatcgcggccttgtcgagcctggcgaaaatgtcggcctgctcgccgcacagggcatt
ggtgagccatcgacacagatgactctcaacacgttccactttgctggacacggtgccgcg
aacgtgacacttggtatcccgcgtctgcgtgagattgtcatgacggcatcgaaggacatc
aagacgcccgtgatgcgcctgccggtgttggcgggcgtcacagacgagcagatgcgcacc
ttctgcaaggacggcagccggctggtgctcagtcagatcatcgaagaggctattgtcacc
gagcgcgtgctgccgaagacagcggccaacggctaccagcgccagaagcagtacacagtg
cggctgcagttctacccggctgatgaagtgcgcgaggagtacaatgcgtcgacggaacac
gttctgcgtggtcttgaggccacatttgtgcccctggttgagcgggagattgtgcgtgag
ctcaagcgtctgcgacgcgatcaggtgcggcagtcgcagtccatcggccagggtcagtcg
tttagtgagtcagcagaggaggaggcgcccgctgcgcggcgccgtgaggatgacagcgat
gacgaagaaaatgtgtccgaagctggagacgacgacgatgcaacggctgccaagcgacgc
gcaaacgctggttccaaggtttcttacgacgacgacgccgaggatgcgacagatacagcg
gacgatattgctcgggcgtttaacgacgagcaagccgacgaagaagagcaagagccggag
gagcaagaagaggccatggagacgcgcgtatcagacctaggcgagcggctgcagaacgag
agcaagttcgtggtgggcttccgcttcgacagcgcacagggctcctgggccgaatttgat
ctgcagatgctcaacagtacggaaaagatgctgctgatcaatgtgattgagcgcgtgtgc
cgtgcaagtgtcgtccatgagatcccacgtgtcagtcgtattatgatcccgcccccgaca
ccaggcgactcgtccgtggcgcttatggcggagggcatcaacttacgtggcatgtgggac
tttggcttcggcgtcattgatttgaaccgaatgtacacaaacgatatcggtgcccttttg
cacaattacggcgtggaagcggcgcgtgctgcaattgtcagcgaactgaagggcatcttc
gacacgtacggtatcggtgtgtcgatgcgccacatgttcctcattgccgactaccagacg
gcgtttggcgactttaggcctttcagccgcggcggtctggcagatgcgccgtcgcccctg
ctcaaggccagcttcgagatgacgatggcgttcttgagtggcgcagctctattccaggag
gcagacgacctctcgtcgccctcgagtaacattgtggtcggtcgtccggtgcctacgggt
acgggcgctacgacgattcatatgcctctgacggcatctgcatag
DBGET
integrated database retrieval system
