Methanospirillum sp. J.3.6.1-F.2.7.3: KHC33_04430
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Entry
KHC33_04430 CDS
T07306
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
mrtj
Methanospirillum sp. J.3.6.1-F.2.7.3
Pathway
mrtj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mrtj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KHC33_04430 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrtj03021
]
KHC33_04430 (rpoB)
Enzymes [BR:
mrtj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KHC33_04430 (rpoB)
Transcription machinery [BR:
mrtj03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
KHC33_04430 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Auto_anti-p27
DUF1451
DNA_RNApol_7kD
Motif
Other DBs
NCBI-ProteinID:
QVV89759
UniProt:
A0A8E7EK37
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All DBs
Position
899021..900841
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AA seq
606 aa
AA seq
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MITTQSRVFVDGALIGLVDDPKELVAKIRSMRRQGVISTEVNCSYKEFNGDIIIHTDRGR
ARRPLIVLENGIPTVPDEEVQKLKNKEIVFTDLIKKGYIELIDAEEEEDLRIAIKPEDIT
PNHTHLEVDPSLILGIGAAHVPFPEHNASPRVTMGAGMVKQALGFGCANMKLRPDTRGHL
LHYVQKPLVYTQTSDVIGSDDRAAGQNFVVAILSYEGYNIEDALIFNKASIDRGLGRSHF
FRTYEGEERRYPGGQIDRIEVPDEEVTGAHGSDYYSNLDDDGIINPETVVKEKDVIIGKT
SPPRFLEEPTSELITVEKRRDTSVTMRSNEHGIVDTVILTEGENNSKLVKVRTRDLRVPE
VGDKFASRHGQKGVVGLITPSVDMPFTAGGMVPDLVINPHAIPSRMTIGHMLEMLGGKVG
SLEGRRISSTAFSGEREENLRASLKKFGFSHTGREAMWDGITGRRFFADIYVGVIYYQKL
YHMVSSKMHARSRGPVQVLTRQPTEGRAREGGLRFGEMERDVMIGHGAAMALKERLLEES
DKVTEFVCARCGMVAMLDRKQNITRCLNCGSETDIYPVEMSYAFKLLLDEMKSMTIAPRL
NLEDVV
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgattacaactcagtcacgggtatttgttgatggagcattaatcggacttgtagatgat
ccaaaagaactggttgcaaaaatccggtccatgcgtcgccagggtgtcatttcaaccgag
gtgaactgctcatacaaggaatttaatggggatattatcatccataccgaccgtggtcgg
gcacgcagacctttgattgtgcttgaaaatgggatccctaccgttcctgatgaagaagtt
caaaaacttaaaaataaagagatcgtatttaccgatctcataaaaaaaggttatattgaa
ctcatcgatgcagaagaggaagaagatcttcggattgcaataaagcctgaagatattact
ccgaaccacactcatcttgaagttgatccctcgcttatcctgggaatcggtgcagctcat
gttccattccctgaacataatgcatctccccgtgttaccatgggggcaggaatggtcaag
caggcacttggatttggctgtgcaaatatgaaactccggccagacactcgtggtcacctg
ctccattatgtacaaaagcctctggtatatacgcagacttctgatgtgattggttcagat
gaccgggctgcaggacagaactttgttgtcgctatcctctcctacgaaggatataatatt
gaagatgcacttattttcaacaaagcgtccatagacagaggtcttggccgttcacacttt
ttcagaacatacgaaggtgaggaacgccgatatccgggaggtcagattgacaggattgag
gttcctgatgaggaagtgacgggagctcatggttcagattattattcaaatctggatgat
gatggtatcatcaaccctgagacagttgtcaaagaaaaagatgtaatcatcggaaagact
tcaccacctcgtttcctcgaagaaccaacttcagaactaataactgtggaaaaacgccgt
gatacatccgttacaatgcggtcaaatgaacatggtattgttgacaccgttatccttact
gaaggagagaacaactcaaaacttgtgaaggtccgaacccgtgatcttcgtgttccagaa
gttggtgacaagtttgcatcccggcatgggcagaaaggagtggttggattaattactcca
tctgttgatatgccctttactgccggaggtatggtcccggatcttgtaattaacccacat
gcaatcccgtctcgtatgaccatcggtcatatgcttgagatgcttggagggaaagtagga
tctttagaaggtcgtcgtatctccagcactgctttttcgggagaacgtgaagagaatctt
cgtgcatcactgaaaaagtttggattctctcatactggcagagaagcaatgtgggatggc
atcaccggaagacggttctttgctgatatctacgttggcgttatttactatcagaaactt
taccacatggtctcatccaagatgcatgcccgttccagaggtccggttcaggtgcttacc
cgtcagccgacagaaggtcgtgcccgtgaaggaggtctgcgtttcggagaaatggagcgt
gatgtcatgattggtcatggtgctgccatggctctcaaagagcgtctgctagaagaatcc
gataaggtcaccgaattcgtgtgtgcacggtgtggtatggtagctatgcttgatcggaag
cagaatatcacccgttgtctgaattgtggcagtgaaacagacatttaccccgttgagatg
tcatatgcatttaaactgctcctcgatgagatgaagagtatgactatcgctccccgtctc
aatcttgaggatgttgtataa
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