Methanobrevibacter ruminantium: mru_1687
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Entry
mru_1687 CDS
T01166
Name
(GenBank) MiaB-like tRNA modifying enzyme
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
mru
Methanobrevibacter ruminantium
Brite
KEGG Orthology (KO) [BR:
mru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mru03016
]
mru_1687
Enzymes [BR:
mru01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
mru_1687
Transfer RNA biogenesis [BR:
mru03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
mru_1687
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
Motif
Other DBs
NCBI-ProteinID:
ADC47537
UniProt:
D3DYY7
LinkDB
All DBs
Position
complement(2187439..2188725)
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AA seq
428 aa
AA seq
DB search
MDNMKVFIETYGCTFNQADSEIMAGILNENNIGLVSTEEEADAIIVNTCYVKLPTESKVI
NRIKNLQKQYPDKKIIVGGCMVEVDPKKLEAIGPNCSWIGPHQLNKTADVVKSTIGGEIV
REFGFSDEPKVCVPKIRKDPYIHVIQICEGCLGACTYCCTRFARGHLNSYPIKDIVEEAR
LAIEDGCVEIELTAQDTSAFGKDTGEKLSDLIKEVASLDGDFRVRVGMMHPRNIGNDLDN
LIEAFKMEKVYDFIHLPIQSGSDKVLREMGRNHTVDDYKNIVYSFKQAIPDITIATDIII
GYPTETEEDFMKTAELIREIKFNLIHLSKYQHREGAISSSLDNIPFDDMKRRSKYLSEIK
FEMLEEENKFLQDREMDALVVEKGSKGGFIAKTNSYIPVVVQDVNLGEFIKVHIDKTTGT
YLIGHKID
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
gtggataatatgaaagtatttatagaaacctatggatgtacatttaatcaagcggattct
gaaattatggcagggatattgaatgaaaacaatatcgggcttgtctccactgaagaggag
gctgatgccattattgtaaacacctgctatgtaaaattgcctactgaaagcaaggtaata
aacagaatcaaaaaccttcaaaagcagtaccctgataagaagattatcgttggaggatgc
atggttgaagtggatcctaaaaagcttgaggcaatcggacctaattgctcatggattggt
cctcaccaattaaacaagactgcagatgtagtcaaatctacaatcggcggtgaaattgtt
agggaatttggtttttccgatgaacctaaagtctgcgttcctaaaatacgaaaagatcca
tacattcatgttatccaaatatgtgagggctgcttaggtgcttgcacatattgctgcact
agatttgcccgcggccatttaaacagctatcctataaaggatattgtggaggaagcaaga
ttggccattgaagatggctgcgttgagattgagcttactgcacaggacacttcagcattt
ggtaaggatacaggcgaaaagctctctgatttaattaaggaagttgcaagcttagatggg
gactttagagttcgtgttggaatgatgcaccctagaaacattggaaatgatttggataat
cttattgaagcatttaagatggaaaaagtatatgatttcattcatttgcctatacagtct
ggcagtgacaaggtcttaagggaaatgggaagaaaccatactgtagatgattataagaat
attgtctatagcttcaaacaggctattccagatattactatagccactgacatcattatc
ggatatccgacagagactgaagaggattttatgaagacagcagagcttattagagaaatc
aaattcaatcttattcatctctccaaatatcagcatagggagggagccatatcatcttcc
ctggataatattccttttgatgatatgaaaagaagatcaaagtatttatctgagattaag
tttgaaatgcttgaagaggaaaataagttcttgcaggatagggagatggatgctttggtt
gtggaaaagggctctaaaggaggattcattgcaaagaccaattcatatattcctgttgtg
gttcaggatgtgaacttaggagagtttattaaggttcatattgataagacaactggaacc
tatctcattgggcataaaatcgattga
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