Mauremys reevesii (Reeves's turtle): 120403675
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Entry
120403675 CDS
T07797
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120403675 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrv03019
]
120403675 (CLP1)
Enzymes [BR:
mrv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
120403675 (CLP1)
Messenger RNA biogenesis [BR:
mrv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
120403675 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
MMR_HSR1
ATP_bind_1
AAA_16
AAA_22
TniB
AAA_18
CbiA
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
120403675
NCBI-ProteinID:
XP_039391068
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All DBs
Position
LG4:141642773..141650572
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AA seq
425 aa
AA seq
DB search
MAEEAGDEKKQVAKFELERETELRFEVEASQTVQLELLAGMAEIFGTELTRNKKFTFDAG
AKVAVFTWHGCTVQLSGRTEVAYISKDTPMLLYLNTHTALEQMRRQAEREDERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTFVELDVGQGSVSIPGTMGALYIERPADVEEGFSV
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYH
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDDR
IREYFYGFRGCFYPHAFDVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSTADGSEENISETSVAGFIVVTGVDVDRQVFTVLSPAPRPLPKNFLLIMDIR
FMDLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggaggctggggatgagaagaagcaggtggcaaagtttgagctggagcgggag
acggagcttcgctttgaggtggaggcctcgcagactgtccagctggagctgctggcaggc
atggcagagatcttcggcaccgagctgacccgtaacaagaagttcactttcgatgctggt
gccaaggtggccgtgttcacgtggcatggctgcacagtgcagctgagtggccgcactgaa
gtggcttacatatcgaaggacacacccatgctgctctacctcaacacccacacagccctg
gagcagatgcggcggcaagcagagcgcgaggatgagcgggggccccgggtcatggtggtg
gggcccacggatgtgggtaagtcgacagtgtgccggctgctgctgaactacgctgtgcgg
ctagggcgccgacccaccttcgtggagctggacgtgggccaaggctcggtctccatccct
ggcaccatgggggcactgtatatcgagcggcctgctgatgtagaggagggcttctctgtc
caggccccccttgtctatcactttggctccaccactccaggcaccaacatcaaactctat
aacaagatcacatctcgcttggctgacgtctttaaccagcgctgcgaagtgaaccgccgg
gcttcagtcagtggctgcgttatcaacacgtgcggctgggtgaagggctcagggtaccac
gccctggtgcatgccgcctcagcctttgaggtggatgtggtggtagtgctggaccaggag
cgcctatacaatgagctgaagcgggacctgccccattttgtgcgcacagtgctgctcccc
aaatcgggtggggtggtagagcgctccaaggacttccggcgggagtgccgggatgaccgc
atccgtgagtacttttacggcttccgtggctgcttctacccccacgccttcgatgtcaaa
ttctccgatgtcaagatctacaaggtgggggctcccaccatccctgactcatgcctgccc
ctgggcatgtcgcaggaggacaaccagctcaagcttgtgccagtgacgccgggccgtgac
atggtgcaccatctgctgagcgtcagcactgctgatggcagtgaggagaacatctccgag
actagcgtggctggcttcatcgtcgtcactggggtggacgtagatcgccaggtcttcaca
gtgctgtcaccagcacctcgcccactgcccaagaacttcctgctgatcatggacatccgc
ttcatggaccttaagtag
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