Mauremys reevesii (Reeves's turtle): 120406059
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Entry
120406059 CDS
T07797
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120406059 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrv03021
]
120406059 (POLR1A)
Enzymes [BR:
mrv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
120406059 (POLR1A)
Transcription machinery [BR:
mrv03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
120406059 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Nop14
Motif
Other DBs
NCBI-GeneID:
120406059
NCBI-ProteinID:
XP_039396169
LinkDB
All DBs
Position
LG5:complement(124802541..124861115)
Genome browser
AA seq
1708 aa
AA seq
DB search
MGPPREVPWRRLAGISFGMYTAEELRKLSVKAITNPRYLDNVGNPAVNGLYDLCLGPPDA
KEVCTTCMQDFNNCPGHLGHIDLPLTVYNPLFFDKLYLLIRGSCLNCHLLTCTRAVVHLL
LSQLKVLEKGLLYAVCDLEAILNRFLDENPDATGLDIEEELNCHVNEILQNNQLGDQCSH
VKNVCECRSKLIAQFWKLHMTSKRCPNCKSRRSLVRKEHNSKLTVTYPTVVQQKSGKEAI
LEEPAIIDETQLGKRGYLTPITAKDHIVALWKNEGFFLNHLFSGLEVGENSGFSPDMFFL
DLLVVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDVQLIRKLLAFMAQEQSQPIKLVENE
IQKVTDEPLESLDRSVLALISGQSTADKLYNIWIRLQSHVNIVFDSDMDKLMTEKYPGVR
QILEKKEGLFRKHMMGKRVDYAARSVICPDMYIATNEIGIPMVFATKLTYPQPVTPWNVK
ELRQAVINGPNVHPGASMVVNEDGSRTVLSTTSQTQREAIAKQLLTPSTGAPKPGMKIVC
RHLKNGDVLLLNRQPTLHRPSIQAHRARILPGEKVLRLHYANCKAYNADFDGDEMNAHFP
QSELGRAEAYVLACTDEQYLVPKDGKPLAGLIQDHMISGASMTIRGCFFTREQYMELIYR
GLTDKKGRVKILPPAIMKPQRLWTGKQIVSTLLINVIPENQIPLNLSGKAKIGGKAWVKG
PQNRIPGSNLDSMCESQVIIRDGELLCGVLDKAHYGSSAYGLVHCCYEVYGGETSGKVLT
CLARLFTAYLQLYRGFTMGVEDILVKPQADHRRHRIIEVSTHCGTRAVRAAFNLPETASC
EEIQGKWQDAHLHKDQRDFNMVDLKFKEEVNNYSNEVNKACMPLGLHRSFPENNLQLMVQ
SGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFQPYDFSPRSGGFVTGRFLTGI
KPAEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLSVRDSDGSVVQFLY
GEDGLDIPRTQFLQPKQFPFIAENYEVIQKSKHIDEVLSKMDPQQANQHFRAIKKWHAKH
QVSLPREGAFLQYSQKKMARVREQTLGGEIINGRDPATLQLLKMWYELDEKSRRKYLKRT
SKCPDPSLAVWRPDIYFASVSEAFESEVENYISEWNAQNNSNYVKSELSCDRLNNLLHLK
WQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANI
KTPMMSVPVLSTKKAHKKVKRLKKQFTRVCLAEVLQKVEVEESLCIEGKLSKHRLYQIKF
YFLPYEYYREEKCLKPRDILYFMETRFFKILLETIKRKSAKLASFNVVNTRKATRRDLDG
SGGESQENQAQDDHEAEEEEAGRLVDGEADEGDADATDTKRREKQEEEVDYESEEENSEE
NGDENAEEEEGMLHDDKRAEDAEEGVQNENNCQTKKEKGPKLEHSTQLRVSAVMSSHPSI
VNYTYDTENELWCEVSLKLPLMKAYFDLSSILTSLMQNTIVHETKGITRCFLNESTNKKG
EKEFVLNTEGINLPELFRYADLLDLSRLYSNDIHAMAKTYGIEAALRVIEKEIKDVFAVY
GIVVDPRHLSLVADYMCFEGVYKPLNRFGMQSNSSPLQQMTFETSYKFLKEATMMGAHDE
LRSPSACLVVGKVVRGGTGLFDLKQPLT
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atggggccgcccagagaggtgccgtggcggcggctggccggtatttccttcgggatgtac
acagccgaggagctcaggaaactaagtgtaaaagccataaccaaccctcgttacctagat
aacgtgggcaacccagcagtaaatggactgtatgatctgtgtttgggaccacctgatgcc
aaagaagtttgtactacttgtatgcaggacttcaacaactgcccaggacacctaggccac
atagatctgccactgactgtttacaatcctctattttttgataaattataccttctgatc
cgaggttcttgtttaaactgtcacttgctgacctgtactcgagctgtggttcacctattg
cttagccagctgaaggttttggagaaggggttgctttatgcggtctgtgatcttgaggcc
atcctgaataggtttttggatgaaaacccagatgcaactggtttagacattgaagaagag
ttaaattgtcatgtgaatgaaatactacaaaataatcaactaggagatcagtgctcacat
gtaaaaaatgtgtgtgagtgtaggagtaaactgattgcacagttttggaaactgcatatg
acttcaaaaagatgcccaaactgcaaatctagaagatctctggtaaggaaagagcacaat
agcaagttgacagtaacctatcccactgtggtacagcagaagtctggcaaagaggccatc
ttggaggaaccagcaattatagatgagactcagttggggaaaagagggtacttgacaccc
atcactgccaaagaccacattgtggctctgtggaagaatgaaggtttctttctaaatcac
ctcttctctggtctggaggttggtgagaattcaggattcagccctgatatgttctttcta
gatctccttgtggttccaccttcaaggtatcgtcctgtgaatcggcttggagaccagatg
tttacaaatggtcaaactgtgaacttgcaggctgtcatgaaagatgtccagttaataagg
aagcttctggctttcatggctcaagaacaaagtcaaccaataaagcttgtagagaatgaa
atccagaaggtgacagatgagccgttggaatcactggaccgttcagtcctggctttgatc
tcaggacagagcactgcagataaactgtacaacatttggattcgtcttcagagccatgtc
aatattgtgttcgacagtgacatggacaaactaatgacagaaaaataccctggtgtccgt
cagatactggagaaaaaggaaggactgttccgtaagcacatgatgggaaaacgtgtggat
tacgctgctcggtcagtcatttgccctgacatgtacattgctaccaatgagattggtatt
cctatggtatttgctaccaaattgacttaccctcagccagtaactccgtggaatgtcaaa
gaactgaggcaggctgtcataaatggtccaaatgttcaccctggtgcctccatggtcgtt
aatgaagacgggtcacgtacggtgttgagtacaaccagccagacccagagggaagccata
gctaagcagctcctcactccttccactggagccccaaaaccaggaatgaaaattgtatgt
cgccatcttaaaaatggagatgtcctcttactgaaccgtcagcccacccttcacagaccg
tccatccaagcccaccgggccagaatcctgcctggggaaaaggtgctgaggcttcactat
gccaactgcaaagcctacaatgctgattttgatggtgatgaaatgaacgctcattttcct
cagagcgagctaggccgggcagaagcctacgtgttagcctgcactgatgaacagtatctc
gttcctaaggatggcaaaccactggcaggtttgatccaggatcatatgatctctggtgcc
agcatgacgatccggggctgctttttcacaagagaacagtacatggagctgatatataga
ggactgacagacaaaaagggaagagtgaaaatccttccacctgccattatgaaaccacaa
cggttatggacaggaaaacagattgtttctacgttgctaataaacgtaatccctgaaaat
caaatcccactgaatttgtctgggaaagctaagattggtggaaaagcctgggtaaaaggg
ccccaaaacagaattcctggatctaatcttgattcaatgtgtgaatcccaggttatcatt
agagacggggagttactttgcggggtcttggacaaagctcactatggcagctctgcctat
ggcctagtccactgttgctatgaagtctatggtggggaaaccagcggcaaggtgcttaca
tgtctagctcgcctctttactgcctatttgcagctgtacaggggatttacaatgggagtt
gaagatattttggtcaaaccccaagcagaccacagaagacaccgaatcattgaagtgtcc
acccattgtggtaccagggctgttagagctgcatttaacttgccagaaactgcatcatgt
gaagagatccaagggaaatggcaggatgcccatctccacaaagaccagagggattttaat
atggttgatctgaaattcaaggaggaagtaaataattacagcaacgaggttaacaaggcg
tgcatgccccttggtctccacaggagcttcccagagaacaacttgcagttaatggtgcag
tcaggagccaaaggatccactgtaaatacaatgcagatttcgtgcttgctgggtcagatt
gagttggaaggtcgaaggccccctctgatggcatctggtaaatcattgccttgtttccag
ccttatgatttttcccctagatcagggggatttgtgactggcagatttctcacaggcatc
aaacctgctgaattcttctttcactgcatggctggcagggaaggtctggtggatacagct
gtcaaaaccagccgatctggataccttcaaaggtgtatcataaagcacttggaagggctg
gtagttcagtatgacctgagtgtgagggacagcgatggcagtgtggtgcagttcctttat
ggtgaagatgggctagatatccccaggacccagttcctgcaacccaagcagtttcctttc
attgcagagaactatgaggtgatacagaagtctaaacacatagatgaagttttatccaag
atggatcctcagcaagcaaatcaacacttcagggctatcaaaaagtggcatgccaagcat
caagtttctttgccaagggaaggagcttttctgcagtattctcagaaaaaaatggcaaga
gtgagggaacagaccctaggaggggagatcataaatggcagagacccggcaaccctacag
ttactgaagatgtggtatgaactggacgagaagagccggagaaaatatctaaagaggaca
tctaagtgtcctgaccccagcctggctgtctggcgtccagatatttattttgcatctgtt
tcagaagcatttgaaagtgaggtagagaattacatcagtgaatggaatgctcagaacaac
agcaactatgtaaaatcagagctttcttgtgatagattaaacaacttgttgcatttgaag
tggcaaaggtccctgtgtgacccaggagaggctgtgggtctccttgctgctcaaagcatt
ggggagccttccacgcagatgactctaaacacctttcattttgctggcagaggtgaaatg
aatgtcacattgggtattccaaggttgcgggagatcctgatggtagctagtgctaacatt
aaaactccaatgatgagcgttcctgtgcttagtaccaagaaagctcacaagaaggtgaaa
aggcttaagaaacagtttacaagagtgtgcttagccgaggtcttgcaaaaagttgaagtt
gaggagtctctgtgcatagaagggaaactaagcaaacaccgtctctaccaaatcaaattt
tatttcctgccatacgaatactatcgggaggagaagtgtctgaagccgagggacatctta
tacttcatggaaacacggttctttaaaatcttgctggaaacaattaaaaggaagagtgca
aagctggcatctttcaatgtggtcaatactcgtaaggcaactcggagggatctagatggc
agtggtggagaatcccaagaaaaccaggcacaggatgatcatgaagctgaggaagaggaa
gcagggaggctcgttgatggtgaagcagatgaaggagatgctgatgctacagatacaaaa
cgaagagagaagcaggaagaagaggttgattatgagagcgaggaagagaacagtgaggaa
aatggtgacgaaaatgcagaagaggaagaaggcatgttgcatgatgataaaagggctgag
gatgctgaagaaggggttcagaatgaaaataattgtcagactaaaaaagaaaaaggaccc
aaactagagcattcaacacagctaagagttagtgctgtgatgagcagtcatccgtctata
gtcaactacacatatgatacagaaaatgagctctggtgtgaggtttcactgaagcttcct
ctgatgaaggcatactttgacctctcctccatcctaacatccctcatgcagaacacaatt
gtccatgagacaaaggggatcacgcggtgcttcttaaatgaaagcaccaataagaaagga
gagaaagaatttgttttaaacaccgagggaataaacctcccagagctattcagatacgct
gatcttttagacctaagccgactttattccaatgacattcatgcaatggctaagacctat
ggaattgaggctgccctgagggtgattgaaaaggaaattaaagatgtgtttgctgtgtat
ggtattgtggtagatcctcggcacctttctcttgtggcagattacatgtgttttgaaggt
gtttacaaaccactgaatcgttttggaatgcagtccaactcctcccctctgcaacagatg
acgtttgaaaccagctacaaatttttgaaggaagcgacaatgatgggtgcccatgatgag
ctgagatctccttctgcatgcctggtggtaggaaaagttgtcagaggagggactggttta
tttgacctcaagcaaccccttacatag
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integrated database retrieval system
