Micropterus salmoides (largemouth bass): 119881840
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Entry
119881840 CDS
T07309
Name
(RefSeq) geranylgeranyl pyrophosphate synthase-like
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam00900
Terpenoid backbone biosynthesis
msam01100
Metabolic pathways
Module
msam_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
119881840
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
msam01006
]
119881840
Enzymes [BR:
msam01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
119881840
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
119881840
2.5.1.29 geranylgeranyl diphosphate synthase
119881840
Prenyltransferases [BR:
msam01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
119881840
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
119881840
NCBI-ProteinID:
XP_038547872
LinkDB
All DBs
Position
Unknown
AA seq
260 aa
AA seq
DB search
MLHNASLLIDDIEDSSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPEAVQV
FTQQLLELHRGQGLDIHWRDTYTCPTEQEYRNMVLQKTGGLFGLAVGLMQLFSDWKQDLK
PLLDTLGLFFQIRDDYANLSSHEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNIL
RQRTENMDIKRYCVDYLEKVGSFAYTRQTLRDLEVEAYRLIGELGGNPQLESLVKHLSQM
HHEAEATAESRTEPRHSHSP
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacaacgccagcttgctcatagacgacatcgaggacagctccaagttgcggcga
ggcttccccgtggcccacagcatctatggcattccctccgtcatcaactcggccaactac
gtctactttttggggttggagaaggtgctgaccctggatcaccctgaggctgtccaagtg
tttacccagcagctgctggagctgcaccgtggtcagggcctggacatccactggagggac
acctacacctgtcccacagagcaggagtatcgcaacatggtgctgcagaaaactggaggg
ctctttggcctggccgtgggcctgatgcagctcttctcggattggaaacaggacctgaaa
cccctcctggacacgctgggcctcttcttccagatccgcgacgactacgccaacctcagc
tctcatgagtacagcgagaataagagcttctgtgaggacctgaccgagggcaagttctct
tttcccaccattcatgccatatggtcgcgtccggagagcacccaggtgcagaacatcctg
aggcagcgcacagagaacatggacatcaaacgatactgtgtggactacctggagaaggta
ggctcgtttgcctacacccgtcagactctgcgggacctggaagtggaggcctaccgcctc
atcggggagcttgggggaaaccctcaactggaaagccttgtcaaacacctcagccaaatg
caccacgaggctgaggccacagcagagtcccgtactgagccacgccacagccacagcccc
tga
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